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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:826201..827550- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001834-T1 ID=KJC3_001834-T1|Name=KJC3_001834-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1350bp|location=Sequence derived from alignment at ch2:826201..827550- (Aspergillus niger KJC3) CGACGGCCTAGTGTGGATTGCGGATGAGCCGAGGTTCAGAACGCCTCAGG
GTCAGTGCCGAAAAGATGGGCTTCTTCAGCCCCCATTCTCATTCACTCAT
TCACTATACTATCTTCATTCACTTTCTGTACAGATAATTTATCAGATTAG
CCTTCAAAATGACCATCACAAACCGCCAACTCATCTACATCAAGGCCCCA
ACGGCAGCCATCGACCCATCCGTGACGACGGGCACCTTCAACCTCAAGAG
CACCACGATCGCCTCCAAAGACAATGTCCCCGACGACAAAGTCCTCGTAC
GCATCCACTACCTGGCCCTTGAGCCTGCCATGCGCCAATGGCTTACAGCC
AAACGGTCGTACATCGCGCCCGTGAGAATCGGCAGTATCATGCGCGGCCA
AAGCATCGCCCAGGTTCTCTCCGTGGGCAGCAGCCTGAAATCTCAATACA
AAGTCGGTGACTGGGTGATTGCCTACTCGGGATGGCAGGAATACGCATTC
CTGGGCGCTAAAGAGGCGCAAAAGATTTCCGTGCCTGCGGGCTGCAAGCC
CACGGACGCGATGTCCGTGCTGGGCATGACTGGCCTGACGGCGTACTTCG
GCATGATGGATGTGGGCAAGCCGAAGGCAGGAGATACGGTGGTGGTGTCT
GGGGCAGCGGGAGCGACGGGGATGGTGGCGGGCCAGATTGCGAAGATTCA
AGGAGCAAAGAGGGTGATTGGGATTGCGGGAAGTAAGGACAAGTGTGAGT
TCTTGTGTCGGGAGTTGGGATTTGATGTGGCGATCAATTATAAGGATGAG
GATTGGAAGAAGCAGCTCAAAGAGGCGACGCCGGAGTATATCGATGTTTA
CTTTGATAATGTGGGCGGGGAGATTCTGGATGCGTGTTTGGGGCGGGCGG
CGCAGTTTGCCAGGTTTGTCATTTGTGGTGCGATTAGCCAGTATAATGTT
GCGAAGCCGAAGGGGCCGGCGAATATTATGCAGGTTATTGTGAGTATCTC
TATGCCATATTTGCGTGAGAAATATGCTGACAGAAGCAGTCGCAACGAGT
CAAAATGCAGGGCTACATCGTGTTCGACTACGCGAAGCAGTACCCGGATG
CGTTGCAGGATTTGGCCAAGTGGTTAACGCAGGGCAAGATCAAGCGCAAG
GAGCACATTGTCAAAGGGGGGTTGGAGTCGGCGCCGCAGAGTCTGGTTGA
TTTGTATAAGGGAGTGAATACGGGCAAGATGATGGTGGAGGTGGTGCCGG
CAGAGGAGGGGATCAAGGCCAAGTTGTAGCCACCAACATAGTAGCATTTT
GAACAGTATACAACAATTTTAGTAAACACTTTAATGACAACTCAGATCCA
back to topCoding sequence (CDS) from alignment at ch2:826201..827550- >KJC3_001834-T1 ID=KJC3_001834-T1|Name=KJC3_001834-T1|organism=Aspergillus niger KJC3|type=CDS|length=2142bp|location=Sequence derived from alignment at ch2:826201..827550- (Aspergillus niger KJC3) TCGCAACGAGTCAAAATGCAGGGCTACATCGTGTTCGACTACGCGAAGCA GTACCCGGATGCGTTGCAGGATTTGGCCAAGTGGTTAACGCAGGGCAAGA TCAAGCGCAAGGAGCACATTGTCAAAGGGGGGTTGGAGTCGGCGCCGCAG AGTCTGGTTGATTTGTATAAGGGAGTGAATACGGGCAAGATGATGGTGGA GGTGGTGCCGGCAGAGGAGGGGATCAAGGCCAAGTTGTAGATGACCATCA CAAACCGCCAACTCATCTACATCAAGGCCCCAACGGCAGCCATCGACCCA TCCGTGACGACGGGCACCTTCAACCTCAAGAGCACCACGATCGCCTCCAA AGACAATGTCCCCGACGACAAAGTCCTCGTACGCATCCACTACCTGGCCC TTGAGCCTGCCATGCGCCAATGGCTTACAGCCAAACGGTCGTACATCGCG CCCGTGAGAATCGGCAGTATCATGCGCGGCCAAAGCATCGCCCAGGTTCT CTCCGTGGGCAGCAGCCTGAAATCTCAATACAAAGTCGGTGACTGGGTGA TTGCCTACTCGGGATGGCAGGAATACGCATTCCTGGGCGCTAAAGAGGCG CAAAAGATTTCCGTGCCTGCGGGCTGCAAGCCCACGGACGCGATGTCCGT GCTGGGCATGACTGGCCTGACGGCGTACTTCGGCATGATGGATGTGGGCA AGCCGAAGGCAGGAGATACGGTGGTGGTGTCTGGGGCAGCGGGAGCGACG GGGATGGTGGCGGGCCAGATTGCGAAGATTCAAGGAGCAAAGAGGGTGAT TGGGATTGCGGGAAGTAAGGACAAGTGTGAGTTCTTGTGTCGGGAGTTGG GATTTGATGTGGCGATCAATTATAAGGATGAGGATTGGAAGAAGCAGCTC AAAGAGGCGACGCCGGAGTATATCGATGTTTACTTTGATAATGTGGGCGG GGAGATTCTGGATGCGTGTTTGGGGCGGGCGGCGCAGTTTGCCAGGTTTG TCATTTGTGGTGCGATTAGCCAGTATAATGTTGCGAAGCCGAAGGGGCCG GCGAATATTATGCAGGTTATTTCGCAACGAGTCAAAATGCAGGGCTACAT CGTGTTCGACTACGCGAAGCAGTACCCGGATGCGTTGCAGGATTTGGCCA AGTGGTTAACGCAGGGCAAGATCAAGCGCAAGGAGCACATTGTCAAAGGG GGGTTGGAGTCGGCGCCGCAGAGTCTGGTTGATTTGTATAAGGGAGTGAA TACGGGCAAGATGATGGTGGAGGTGGTGCCGGCAGAGGAGGGGATCAAGG CCAAGTTGTAGATGACCATCACAAACCGCCAACTCATCTACATCAAGGCC CCAACGGCAGCCATCGACCCATCCGTGACGACGGGCACCTTCAACCTCAA GAGCACCACGATCGCCTCCAAAGACAATGTCCCCGACGACAAAGTCCTCG TACGCATCCACTACCTGGCCCTTGAGCCTGCCATGCGCCAATGGCTTACA GCCAAACGGTCGTACATCGCGCCCGTGAGAATCGGCAGTATCATGCGCGG CCAAAGCATCGCCCAGGTTCTCTCCGTGGGCAGCAGCCTGAAATCTCAAT ACAAAGTCGGTGACTGGGTGATTGCCTACTCGGGATGGCAGGAATACGCA TTCCTGGGCGCTAAAGAGGCGCAAAAGATTTCCGTGCCTGCGGGCTGCAA GCCCACGGACGCGATGTCCGTGCTGGGCATGACTGGCCTGACGGCGTACT TCGGCATGATGGATGTGGGCAAGCCGAAGGCAGGAGATACGGTGGTGGTG TCTGGGGCAGCGGGAGCGACGGGGATGGTGGCGGGCCAGATTGCGAAGAT TCAAGGAGCAAAGAGGGTGATTGGGATTGCGGGAAGTAAGGACAAGTGTG AGTTCTTGTGTCGGGAGTTGGGATTTGATGTGGCGATCAATTATAAGGAT GAGGATTGGAAGAAGCAGCTCAAAGAGGCGACGCCGGAGTATATCGATGT TTACTTTGATAATGTGGGCGGGGAGATTCTGGATGCGTGTTTGGGGCGGG CGGCGCAGTTTGCCAGGTTTGTCATTTGTGGTGCGATTAGCCAGTATAAT GTTGCGAAGCCGAAGGGGCCGGCGAATATTATGCAGGTTATT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
Term | Definition |
GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001834-T1.utr3p1 | KJC3_001834-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001834-T1.utr5p1 | KJC3_001834-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036291 |
DBxref | InterPro:IPR011032 |
DBxref | InterPro:IPR041694 |
DBxref | InterPro:IPR013149 |
DBxref | InterPro:IPR020843 |
DBxref | PFAM:PF13602 |
DBxref | PFAM:PF00107 |
DBxref | PFAM:PF16884 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch2 | supercontig | ch2:826201..827550 - |
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