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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:829560..833588+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001836-T1 ID=KJC3_001836-T1|Name=KJC3_001836-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4029bp|location=Sequence derived from alignment at ch2:829560..833588+ (Aspergillus niger KJC3)
GAGCCAAACTATGACGATATGCATCTACTTTTACTGTATTAGATGATGTG
ATGTGATGGTTATGCTATGGCCTGGGACATGATCTCATCGCAACTGCCAA
TGGACTGATTGTGTGCATGCAGTATGGAACTCGAGATTGAACCAACCCAT
GGACCGTGTGGCTCTTCACGGATGGCCTCCGATGCCTCTCCACCCAATCT
CTTGTTGAATCTCCCCTTCGTGAACCAACTCCAGCGCACCCAATCCTCTG
GTGAAGCCCAAGCTGACCTCAGCTCCGCTCCGGAACAGCAAATCCTCCTG
GTGATCAGCCACTGACTTAACCTCCAGCCAAGCATCCCACTAACGCTCAG
CTATGTTGAACTATCCGGCACTATCCATGGTCGGATCCCAAGAATAATCC
CGTCGCGCGAGTACAGCCTTCCTGCTCCATTGCTTGAAAGCTGGAAAATA
ATCGTCGCGACTGACTACAGGAAGCTTCTTCCGGAACGCCCGGAGGCTGT
GCGGTGGAACCTCTCTTTCTCTGACTTTTTTTGGCCCTCTTGCTTAGTTT
TTCTATTTTTCTCCTCCCCTGCTCGTCATGGTTTATCTCTTTTGCTTTTC
TCCCTTCCTTCGATGGTACCTGTCCACTTCTTCCTCTCGTCCATCCATCC
ATTTATGATTAAATAATCTTGTGTTCCGTCCCACGCTCTCTCGCGTCCCC
GTTATTGCTATGGTCTCCATGCGCTTGATTTGCTGATCGCCTCCAGCACG
CTCCAGTCTCGCCCCTATGGAGCCACCCTAACGCGAATACGAATGCTCCA
TCATAGACATTCAAACCGTTAGTTTAGTGCGCTATCCCATAGTAACCCAT
CCATCTATCCACTCTGACATGTGATGGATCCTAATCGAACTGCCCTCTTT
AGTCTGTCTCAGCCTTTCTCTTTCCATCTATTCTTATCTTCCCTCATCAC
TCCATTTTTAAACCCTCTTCTCTGCATGGGTCATACATAATCTCAGCTCT
TTCTCCCCTCTCCGCCCACCTTAGCCATGGCGCTTCCTGCACATCCAGCG
GGGACCAATGGTCAGGTCCCCGTCATTGCACACACCTCGCCAGCTGCACA
ACACTCGCCCACCTTCACTGTCAATTCGAGTTCCGACAGTGAGGATCCAA
ATTTTCCGGACGCCGTCCGCGAAGATGAGGCCAATGAAGTGGTCGGGGTT
AGCATGAGTCGCGCCCAGAGCCGTATGAAGGCGCGCCTCACGCCTGCGGA
AGAGAAAAGCCGAATGATGGAACGGCAGAGCAGCTACTTCGACACAATCC
CGGATACGCCGGAACCGGAGGGTCTTTTTGCATCTGAAATTACCGACGAA
CCAGAGGCTTTGCCTGAGGAACCGGCTGCTAAGCCGGGTGATGCTCAAGC
CTCCTCAGCGGACTTGGCGGCGCCACAGCGTGACAGCGCCCGGGGTTCCA
AAGACGGGCAGCGAACCAGCTTCACCCGTTCGATCTTGAAATCCGGGTTA
CCCCTTCGACCTAGGGCATGGTCCGGCGACTCCTTGACCAATATACGCCT
GAAGAAGTTCCTGCCAGATCTGTTGACTAAACGGTCATCGCTCTCCTTCC
GACCCGGCTCGCCATTCCATGTCCGGGCTCGCAGTCAAACCCTGAAACCG
GCGTCAAAGCTGGCACTAGAACAAGAAAAGGAGGAATCCACGCTGCAGTC
CCGGCGCAAGTCGTTCTCCGACCCGGAGTCCAGAGATAGCCCCGAGGAGC
AAGTATCTGAACTCGATCCTCTCGGGGGCGCCACGACCGCTAGACACTCG
TATGCGCGGAGACCCAGTACAACAGGCCCTCCTTCCCTCCTACGGAGATC
GTCTTCAGACCAATCTCTATACTTGAGAGCCTCATCAACCGCATCTTCTC
TCGAGCAGCGTCCCCGTTACGAGCACATCCATTCGCAGGTCAACAGCCGA
TTCAAGGCGATTAAAGACAGCCTCCAGGACTCCAGCAGCCGGCTGCTTAG
TATGCCCACACTGCACTTGCAAGACCTCCGAAGTGATTGGGGCTATAAGC
CATTTCTGTCCGATGTAACTAATCGCAGGGGTCACACCTACGCCACGCCA
GAGCGGCCACACTCTGCTCGGGAGATGCCGGGTGATGATTCGTTACCACC
TCGGGCCCGTTCTCCGCGGACTAGTATCAGTGCACAGTACCCCAATCTGA
CTGAGGCCATGGCGGAAATGACCGGTGATGTTGTTATTCTCGGAGGCTAT
CGAGGCTCAGTCTTGCGGTCCGCCAAACCGCCGCAGCGTCAACTGTGGGT
TCCGATGAAAGTCGGTCTGAATCTTCGCAAGGTGGATCTGGAGGTTGGCC
TAAATCCGGAAGACGAGGAGCGCATGGAAGAGACCATCATCCCGTCCGGC
GTGTTGTCTCATGTTGGCCCAGTCGACATTTGCCGCCGCTTGATGAAGCG
CCTTCAAAAGTGCCCAAACGCCGTTAACGGGGATCTCCGAGTCCACGATT
ATGGTTACGACTGGCGATTGAGTCCGCATTTACTTGCTAAGCGACTAGTC
AAGTTTCTAGAAGGCTTGCCCTGTAACTCCCCAGACACCCCTCGCGAAAA
GCGCGGAGCCTATGTCATCGCCCACAGTTTGGGCGGCCTCATCACACGAC
ATGCCGTTAATCAGCGGCCGGATCTCTTTGCAGGAGTCCTCTATGCAGGC
GTCCCGCAGCACTGTGTCAACATCTTAGGCCCTCTCCGTAATGGGGATGA
TGTGCTGCTTAGTTCCCGCGTCCTTACTGCTCAGGTGAACTTCACCTTCC
GTACCAGCTTTGCCCTGCTTCCAGAGGACGGACACTGTTTTATCAACAAG
CGGACGAAGGAAGAGTACCGTGTGGATTTCTTTTCTGCCCAGGCGTGGGA
CGACTACCGGCTCTCTCCTTGTATCAATCCGGCCCTTCCACTTGGAAACA
ACAGAGGCTTCAAGGACAACCTGCCTCTTCTCGGAAAGCGCATCTCCACC
GTCCTAGGCAGTAAGGATAGTCTATCCTCGTCGGATGATGCCAATGGCGA
CCAGGCATCACATAATCACACCCAGCACCCTTACGAAACAGCAAATCCTT
CCAGTGAGACCACCGGCAAATCTGCGCCGGTCGCTCCCCCGAACCTGGAG
AGCGCGGTAGGACCAACCCCCAACTTCAAGGGTTCAGCCAACACTAAGGC
TACCACAACTACGACCATACCCCGTGCGACAGCCGTGACTTATCTGGAGC
GTACTCTAGCAGAGGTCCTTCGGTTCAAACAAGAGCTTGCATTCAACTCC
TCATATCAGTCTCAAAACCAATACCCACCCTTTGCCGTGCTATACGGCAA
GTCCGTACCCACCGTCTACGGAGCTCGCGTCGAATCGCGCGAGCGTATCC
CATACCAAGACGCCTACGACGATCTGGCTTTCGCAGCCGGTGACGGCGTC
TGTCTTGCCTCCGCGGCCATGCTGCCGCCGGGATACCGGATCATCAAGGG
TGGTCTGGTAAAGAGCGATCGTGGACACGTCGGGCTTCTCGGCGACCTGG
AAGGCGTGGGTCAATGTCTTCTGGCGTTAGTCAGAGGCCGACAAGAGGGT
GTTGGACTGGGCGGTTCTTCCCAGCAACAGTCGTCTTCGTCATCATGATT
TATCATCATCATTATTATCCTCATACCTCTCACTCTCTCTCCCCTCCCGA
CAAGACAAACACATGCATGCATACATATCGTCATTGTTATTACCGCCTAT
GCATACTAGAAACGATACCCCTATCATAAATATTGTTCGCACTGCATCCT
GTTTATGACGACTATGAATGAATAATGAATGACTATTCATATGGTATATA
CAGTGTATTGATACTTTGATTGGTTGTGAAGCTGAAACGGCATCCACATC
CATACATACGAGCGTCTCCGCCTTTGTGATCTGCGGGACTACTACTACTC
ATCACCACATGCATACAATGTTCATGGCTAGAATTGGTGTGTAAAATATA
TCATCTACAATCCAAAGAGTTGGTTTAGG back to topCoding sequence (CDS) from alignment at ch2:829560..833588+ >KJC3_001836-T1 ID=KJC3_001836-T1|Name=KJC3_001836-T1|organism=Aspergillus niger KJC3|type=CDS|length=2622bp|location=Sequence derived from alignment at ch2:829560..833588+ (Aspergillus niger KJC3)
ATGGCGCTTCCTGCACATCCAGCGGGGACCAATGGTCAGGTCCCCGTCAT
TGCACACACCTCGCCAGCTGCACAACACTCGCCCACCTTCACTGTCAATT
CGAGTTCCGACAGTGAGGATCCAAATTTTCCGGACGCCGTCCGCGAAGAT
GAGGCCAATGAAGTGGTCGGGGTTAGCATGAGTCGCGCCCAGAGCCGTAT
GAAGGCGCGCCTCACGCCTGCGGAAGAGAAAAGCCGAATGATGGAACGGC
AGAGCAGCTACTTCGACACAATCCCGGATACGCCGGAACCGGAGGGTCTT
TTTGCATCTGAAATTACCGACGAACCAGAGGCTTTGCCTGAGGAACCGGC
TGCTAAGCCGGGTGATGCTCAAGCCTCCTCAGCGGACTTGGCGGCGCCAC
AGCGTGACAGCGCCCGGGGTTCCAAAGACGGGCAGCGAACCAGCTTCACC
CGTTCGATCTTGAAATCCGGGTTACCCCTTCGACCTAGGGCATGGTCCGG
CGACTCCTTGACCAATATACGCCTGAAGAAGTTCCTGCCAGATCTGTTGA
CTAAACGGTCATCGCTCTCCTTCCGACCCGGCTCGCCATTCCATGTCCGG
GCTCGCAGTCAAACCCTGAAACCGGCGTCAAAGCTGGCACTAGAACAAGA
AAAGGAGGAATCCACGCTGCAGTCCCGGCGCAAGTCGTTCTCCGACCCGG
AGTCCAGAGATAGCCCCGAGGAGCAAGTATCTGAACTCGATCCTCTCGGG
GGCGCCACGACCGCTAGACACTCGTATGCGCGGAGACCCAGTACAACAGG
CCCTCCTTCCCTCCTACGGAGATCGTCTTCAGACCAATCTCTATACTTGA
GAGCCTCATCAACCGCATCTTCTCTCGAGCAGCGTCCCCGTTACGAGCAC
ATCCATTCGCAGGTCAACAGCCGATTCAAGGCGATTAAAGACAGCCTCCA
GGACTCCAGCAGCCGGCTGCTTAGTATGCCCACACTGCACTTGCAAGACC
TCCGAAGTGATTGGGGCTATAAGCCATTTCTGTCCGATGTAACTAATCGC
AGGGGTCACACCTACGCCACGCCAGAGCGGCCACACTCTGCTCGGGAGAT
GCCGGGTGATGATTCGTTACCACCTCGGGCCCGTTCTCCGCGGACTAGTA
TCAGTGCACAGTACCCCAATCTGACTGAGGCCATGGCGGAAATGACCGGT
GATGTTGTTATTCTCGGAGGCTATCGAGGCTCAGTCTTGCGGTCCGCCAA
ACCGCCGCAGCGTCAACTGTGGGTTCCGATGAAAGTCGGTCTGAATCTTC
GCAAGGTGGATCTGGAGGTTGGCCTAAATCCGGAAGACGAGGAGCGCATG
GAAGAGACCATCATCCCGTCCGGCGTGTTGTCTCATGTTGGCCCAGTCGA
CATTTGCCGCCGCTTGATGAAGCGCCTTCAAAAGTGCCCAAACGCCGTTA
ACGGGGATCTCCGAGTCCACGATTATGGTTACGACTGGCGATTGAGTCCG
CATTTACTTGCTAAGCGACTAGTCAAGTTTCTAGAAGGCTTGCCCTGTAA
CTCCCCAGACACCCCTCGCGAAAAGCGCGGAGCCTATGTCATCGCCCACA
GTTTGGGCGGCCTCATCACACGACATGCCGTTAATCAGCGGCCGGATCTC
TTTGCAGGAGTCCTCTATGCAGGCGTCCCGCAGCACTGTGTCAACATCTT
AGGCCCTCTCCGTAATGGGGATGATGTGCTGCTTAGTTCCCGCGTCCTTA
CTGCTCAGGTGAACTTCACCTTCCGTACCAGCTTTGCCCTGCTTCCAGAG
GACGGACACTGTTTTATCAACAAGCGGACGAAGGAAGAGTACCGTGTGGA
TTTCTTTTCTGCCCAGGCGTGGGACGACTACCGGCTCTCTCCTTGTATCA
ATCCGGCCCTTCCACTTGGAAACAACAGAGGCTTCAAGGACAACCTGCCT
CTTCTCGGAAAGCGCATCTCCACCGTCCTAGGCAGTAAGGATAGTCTATC
CTCGTCGGATGATGCCAATGGCGACCAGGCATCACATAATCACACCCAGC
ACCCTTACGAAACAGCAAATCCTTCCAGTGAGACCACCGGCAAATCTGCG
CCGGTCGCTCCCCCGAACCTGGAGAGCGCGGTAGGACCAACCCCCAACTT
CAAGGGTTCAGCCAACACTAAGGCTACCACAACTACGACCATACCCCGTG
CGACAGCCGTGACTTATCTGGAGCGTACTCTAGCAGAGGTCCTTCGGTTC
AAACAAGAGCTTGCATTCAACTCCTCATATCAGTCTCAAAACCAATACCC
ACCCTTTGCCGTGCTATACGGCAAGTCCGTACCCACCGTCTACGGAGCTC
GCGTCGAATCGCGCGAGCGTATCCCATACCAAGACGCCTACGACGATCTG
GCTTTCGCAGCCGGTGACGGCGTCTGTCTTGCCTCCGCGGCCATGCTGCC
GCCGGGATACCGGATCATCAAGGGTGGTCTGGTAAAGAGCGATCGTGGAC
ACGTCGGGCTTCTCGGCGACCTGGAAGGCGTGGGTCAATGTCTTCTGGCG
TTAGTCAGAGGCCGACAAGAGGGTGTTGGACTGGGCGGTTCTTCCCAGCA
ACAGTCGTCTTCGTCATCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001836-T1.utr5p1 | KJC3_001836-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001836-T1.utr3p1 | KJC3_001836-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:829560..833588 + |
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