You are here

Home

KJC3_001837-T1, KJC3_001837-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001837-T1
Unique NameKJC3_001837-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:833947..835699-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001837-T1 ID=KJC3_001837-T1|Name=KJC3_001837-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1753bp|location=Sequence derived from alignment at ch2:833947..835699- (Aspergillus niger KJC3)
CTTCTTCCTCTTCCTCTACGCTACTTATTCCCCCCTCTTACTCTCTCTTA
CCTCTGTTTAACTCTTTATTTCTGTTCGCAATACCCTGTTTTAGGATATT
CAATAGTCTCTTAGATCTTGGATTTATCTCCTAATCCTTCAATTGCTCTT
CTTTTTCTTCACTTGTCGTCTCCAATTTCCTTGCCGGTTTACCCCGCGCC
GTTGATCGTCAGAATGGATCTCGTCAACCAGTGAGTCAATTGCCCCGTAG
CAAGCATTGAACCCCACGATCACCACATGCTCGTCACCATTTGTATATAT
TGACTGACATTTTCCCTTACAGCCTCGAAGGAAGACTGCTCTTCGCTGTC
CCCAAAAGCAAGTTCCCGCCATGACTCACTCTCCCTGACCGCAAAGCACC
CCCCCAAATTGTCCAACCCACCAATGGCCCCTAAACCAAGCACCGGACTA
ACGCCTGCCTTGCCATGAACAGAGGGCCGTCTTCAACAAGCTACGCTGGA
CCTCCTGGCCGGCTGCGACATCCAGTTCCGTCGCGAAACCCGCCTGGACA
TCGCCCTGGTCAAGAACCTTCCTATCGCCCTCATCTTCCTTCCCGCCGCA
GATATCCCCACCTTTGTCGGTGAAGGCCGTGTTGATCTTGGTATCACCGG
ACGCGACCAGATTGCCGAGCACGATGCGCTGCTGCCCCGCGGCGAAGTCT
CGAACGTGGAGGAGGTCATGGACCTTGGCTTCGGCGCCTGCAAGCTCCAG
GTGCAGGTTCCGGAGAAGGGCGACATCACTGAGGCCAAGCAGCTGATTGG
CCGTAACATTGTCACCAGCTTCACTGCTCTCACTGAGCAGTTCTTTGCCA
AGCTCGAGGGCAAGAGCGAGGCTGACAAGAGCGAGCTCAGCACGAAGATC
AAGTACGTCGGCGGCAGTGTTGAGGCTGCTTGCGCTCTGGGCGTTGCTGA
CGGCATCGTTGATCTTGTTGGTAAGCTTAAAGATCCTCATTCGCAGCATT
ATCAGGCCAGTTAGCGACTAACTGAGTCCATAGAGTCCGGTGAGACCATG
AAGGCCGCTGGTCTCAAGGCCATCGACACCGTCGTCGAGACCATCTCCGT
CCTGGTCAAGTCCAAGAAGACCCAGAACCCTCTGGTTGACCTGATTGCTT
CCCGTATCCGCGGTGTCATCAGTAAGTTCCTGCTTCTGCCTTCCATATCA
TCCGATCGGTTCGGTTAATTCGTCTCCCCTTCTCTGCAGCTGCCCAAAAA
TACGTCCTGTGCCAGTACAACATCCCCCGCGGAGAGTTGGCCACCGCCTC
CAAGATCACCCCCGGCAAGCGCGCACCCACGGTGACCGCCCTGGAAGAAG
ACGGCTGGGTGGCCGTCAGCTCGATGGTCGAGAAGAAGAAGATCGCGACG
GTCATGGACGACCTGACCAAGGTTGGCGCAACGGATATTCTGGTCCTGAA
CATCGCCAACTCGAGAACGGGTTAAGTGTGAAAGCAAAGCCTCGTTATCT
TGCAGTTTTCCTTTTTCTTCTCTTCATGTATAGGGCGCGTTTCTTCCTTT
CTTTCTCGTTATATTTCTTGTGATCAAATATTATCGGCATTCTAGATGGT
TAGACGGGTATAATCGAGTCCATGAGATACGGTTCAATGATCAGAGTACG
GTAACTCTTTCCAAGAGTACTAATCAGTGTGGAGATACATTCATTGATAT
GATTTAATGAAAGGGTTGGTAGTGGATGACCTCAGAATCGAATGGTAGCT
GAG
back to top

Coding sequence (CDS) from alignment at ch2:833947..835699-

>KJC3_001837-T1 ID=KJC3_001837-T1|Name=KJC3_001837-T1|organism=Aspergillus niger KJC3|type=CDS|length=4620bp|location=Sequence derived from alignment at ch2:833947..835699- (Aspergillus niger KJC3)
CTGCCCAAAAATACGTCCTGTGCCAGTACAACATCCCCCGCGGAGAGTTG
GCCACCGCCTCCAAGATCACCCCCGGCAAGCGCGCACCCACGGTGACCGC
CCTGGAAGAAGACGGCTGGGTGGCCGTCAGCTCGATGGTCGAGAAGAAGA
AGATCGCGACGGTCATGGACGACCTGACCAAGGTTGGCGCAACGGATATT
CTGGTCCTGAACATCGCCAACTCGAGAACGGGTTAAAGTCCGGTGAGACC
ATGAAGGCCGCTGGTCTCAAGGCCATCGACACCGTCGTCGAGACCATCTC
CGTCCTGGTCAAGTCCAAGAAGACCCAGAACCCTCTGGTTGACCTGATTG
CTTCCCGTATCCGCGGTGTCATCAAGGGCCGTCTTCAACAAGCTACGCTG
GACCTCCTGGCCGGCTGCGACATCCAGTTCCGTCGCGAAACCCGCCTGGA
CATCGCCCTGGTCAAGAACCTTCCTATCGCCCTCATCTTCCTTCCCGCCG
CAGATATCCCCACCTTTGTCGGTGAAGGCCGTGTTGATCTTGGTATCACC
GGACGCGACCAGATTGCCGAGCACGATGCGCTGCTGCCCCGCGGCGAAGT
CTCGAACGTGGAGGAGGTCATGGACCTTGGCTTCGGCGCCTGCAAGCTCC
AGGTGCAGGTTCCGGAGAAGGGCGACATCACTGAGGCCAAGCAGCTGATT
GGCCGTAACATTGTCACCAGCTTCACTGCTCTCACTGAGCAGTTCTTTGC
CAAGCTCGAGGGCAAGAGCGAGGCTGACAAGAGCGAGCTCAGCACGAAGA
TCAAGTACGTCGGCGGCAGTGTTGAGGCTGCTTGCGCTCTGGGCGTTGCT
GACGGCATCGTTGATCTTGTTGCCTCGAAGGAAGACTGCTCTTCGCTGTC
CCCAAAAATGGATCTCGTCAACCACTGCCCAAAAATACGTCCTGTGCCAG
TACAACATCCCCCGCGGAGAGTTGGCCACCGCCTCCAAGATCACCCCCGG
CAAGCGCGCACCCACGGTGACCGCCCTGGAAGAAGACGGCTGGGTGGCCG
TCAGCTCGATGGTCGAGAAGAAGAAGATCGCGACGGTCATGGACGACCTG
ACCAAGGTTGGCGCAACGGATATTCTGGTCCTGAACATCGCCAACTCGAG
AACGGGTTAAAGTCCGGTGAGACCATGAAGGCCGCTGGTCTCAAGGCCAT
CGACACCGTCGTCGAGACCATCTCCGTCCTGGTCAAGTCCAAGAAGACCC
AGAACCCTCTGGTTGACCTGATTGCTTCCCGTATCCGCGGTGTCATCAAG
GGCCGTCTTCAACAAGCTACGCTGGACCTCCTGGCCGGCTGCGACATCCA
GTTCCGTCGCGAAACCCGCCTGGACATCGCCCTGGTCAAGAACCTTCCTA
TCGCCCTCATCTTCCTTCCCGCCGCAGATATCCCCACCTTTGTCGGTGAA
GGCCGTGTTGATCTTGGTATCACCGGACGCGACCAGATTGCCGAGCACGA
TGCGCTGCTGCCCCGCGGCGAAGTCTCGAACGTGGAGGAGGTCATGGACC
TTGGCTTCGGCGCCTGCAAGCTCCAGGTGCAGGTTCCGGAGAAGGGCGAC
ATCACTGAGGCCAAGCAGCTGATTGGCCGTAACATTGTCACCAGCTTCAC
TGCTCTCACTGAGCAGTTCTTTGCCAAGCTCGAGGGCAAGAGCGAGGCTG
ACAAGAGCGAGCTCAGCACGAAGATCAAGTACGTCGGCGGCAGTGTTGAG
GCTGCTTGCGCTCTGGGCGTTGCTGACGGCATCGTTGATCTTGTTGCCTC
GAAGGAAGACTGCTCTTCGCTGTCCCCAAAAATGGATCTCGTCAACCACT
GCCCAAAAATACGTCCTGTGCCAGTACAACATCCCCCGCGGAGAGTTGGC
CACCGCCTCCAAGATCACCCCCGGCAAGCGCGCACCCACGGTGACCGCCC
TGGAAGAAGACGGCTGGGTGGCCGTCAGCTCGATGGTCGAGAAGAAGAAG
ATCGCGACGGTCATGGACGACCTGACCAAGGTTGGCGCAACGGATATTCT
GGTCCTGAACATCGCCAACTCGAGAACGGGTTAAAGTCCGGTGAGACCAT
GAAGGCCGCTGGTCTCAAGGCCATCGACACCGTCGTCGAGACCATCTCCG
TCCTGGTCAAGTCCAAGAAGACCCAGAACCCTCTGGTTGACCTGATTGCT
TCCCGTATCCGCGGTGTCATCAAGGGCCGTCTTCAACAAGCTACGCTGGA
CCTCCTGGCCGGCTGCGACATCCAGTTCCGTCGCGAAACCCGCCTGGACA
TCGCCCTGGTCAAGAACCTTCCTATCGCCCTCATCTTCCTTCCCGCCGCA
GATATCCCCACCTTTGTCGGTGAAGGCCGTGTTGATCTTGGTATCACCGG
ACGCGACCAGATTGCCGAGCACGATGCGCTGCTGCCCCGCGGCGAAGTCT
CGAACGTGGAGGAGGTCATGGACCTTGGCTTCGGCGCCTGCAAGCTCCAG
GTGCAGGTTCCGGAGAAGGGCGACATCACTGAGGCCAAGCAGCTGATTGG
CCGTAACATTGTCACCAGCTTCACTGCTCTCACTGAGCAGTTCTTTGCCA
AGCTCGAGGGCAAGAGCGAGGCTGACAAGAGCGAGCTCAGCACGAAGATC
AAGTACGTCGGCGGCAGTGTTGAGGCTGCTTGCGCTCTGGGCGTTGCTGA
CGGCATCGTTGATCTTGTTGCCTCGAAGGAAGACTGCTCTTCGCTGTCCC
CAAAAATGGATCTCGTCAACCACTGCCCAAAAATACGTCCTGTGCCAGTA
CAACATCCCCCGCGGAGAGTTGGCCACCGCCTCCAAGATCACCCCCGGCA
AGCGCGCACCCACGGTGACCGCCCTGGAAGAAGACGGCTGGGTGGCCGTC
AGCTCGATGGTCGAGAAGAAGAAGATCGCGACGGTCATGGACGACCTGAC
CAAGGTTGGCGCAACGGATATTCTGGTCCTGAACATCGCCAACTCGAGAA
CGGGTTAAAGTCCGGTGAGACCATGAAGGCCGCTGGTCTCAAGGCCATCG
ACACCGTCGTCGAGACCATCTCCGTCCTGGTCAAGTCCAAGAAGACCCAG
AACCCTCTGGTTGACCTGATTGCTTCCCGTATCCGCGGTGTCATCAAGGG
CCGTCTTCAACAAGCTACGCTGGACCTCCTGGCCGGCTGCGACATCCAGT
TCCGTCGCGAAACCCGCCTGGACATCGCCCTGGTCAAGAACCTTCCTATC
GCCCTCATCTTCCTTCCCGCCGCAGATATCCCCACCTTTGTCGGTGAAGG
CCGTGTTGATCTTGGTATCACCGGACGCGACCAGATTGCCGAGCACGATG
CGCTGCTGCCCCGCGGCGAAGTCTCGAACGTGGAGGAGGTCATGGACCTT
GGCTTCGGCGCCTGCAAGCTCCAGGTGCAGGTTCCGGAGAAGGGCGACAT
CACTGAGGCCAAGCAGCTGATTGGCCGTAACATTGTCACCAGCTTCACTG
CTCTCACTGAGCAGTTCTTTGCCAAGCTCGAGGGCAAGAGCGAGGCTGAC
AAGAGCGAGCTCAGCACGAAGATCAAGTACGTCGGCGGCAGTGTTGAGGC
TGCTTGCGCTCTGGGCGTTGCTGACGGCATCGTTGATCTTGTTGCCTCGA
AGGAAGACTGCTCTTCGCTGTCCCCAAAAATGGATCTCGTCAACCACTGC
CCAAAAATACGTCCTGTGCCAGTACAACATCCCCCGCGGAGAGTTGGCCA
CCGCCTCCAAGATCACCCCCGGCAAGCGCGCACCCACGGTGACCGCCCTG
GAAGAAGACGGCTGGGTGGCCGTCAGCTCGATGGTCGAGAAGAAGAAGAT
CGCGACGGTCATGGACGACCTGACCAAGGTTGGCGCAACGGATATTCTGG
TCCTGAACATCGCCAACTCGAGAACGGGTTAAAGTCCGGTGAGACCATGA
AGGCCGCTGGTCTCAAGGCCATCGACACCGTCGTCGAGACCATCTCCGTC
CTGGTCAAGTCCAAGAAGACCCAGAACCCTCTGGTTGACCTGATTGCTTC
CCGTATCCGCGGTGTCATCAAGGGCCGTCTTCAACAAGCTACGCTGGACC
TCCTGGCCGGCTGCGACATCCAGTTCCGTCGCGAAACCCGCCTGGACATC
GCCCTGGTCAAGAACCTTCCTATCGCCCTCATCTTCCTTCCCGCCGCAGA
TATCCCCACCTTTGTCGGTGAAGGCCGTGTTGATCTTGGTATCACCGGAC
GCGACCAGATTGCCGAGCACGATGCGCTGCTGCCCCGCGGCGAAGTCTCG
AACGTGGAGGAGGTCATGGACCTTGGCTTCGGCGCCTGCAAGCTCCAGGT
GCAGGTTCCGGAGAAGGGCGACATCACTGAGGCCAAGCAGCTGATTGGCC
GTAACATTGTCACCAGCTTCACTGCTCTCACTGAGCAGTTCTTTGCCAAG
CTCGAGGGCAAGAGCGAGGCTGACAAGAGCGAGCTCAGCACGAAGATCAA
GTACGTCGGCGGCAGTGTTGAGGCTGCTTGCGCTCTGGGCGTTGCTGACG
GCATCGTTGATCTTGTTGCCTCGAAGGAAGACTGCTCTTCGCTGTCCCCA
AAAATGGATCTCGTCAACCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0000105histidine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003879ATP phosphoribosyltransferase activity
GO:0000287magnesium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HIS1KJC3_001837Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001837-T1KJC3_001837-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001837-T1.cdsKJC3_001837-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001837-T1.utr3p1KJC3_001837-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001837-T1.exon5KJC3_001837-T1.exon5Aspergillus niger KJC3exon
KJC3_001837-T1.exon4KJC3_001837-T1.exon4Aspergillus niger KJC3exon
KJC3_001837-T1.exon3KJC3_001837-T1.exon3Aspergillus niger KJC3exon
KJC3_001837-T1.exon2KJC3_001837-T1.exon2Aspergillus niger KJC3exon
KJC3_001837-T1.exon1KJC3_001837-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001837-T1.utr5p1KJC3_001837-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263LP3
DBxrefInterPro:IPR011322
DBxrefInterPro:IPR020621
DBxrefInterPro:IPR018198
DBxrefInterPro:IPR015867
DBxrefInterPro:IPR013820
DBxrefInterPro:IPR013115
DBxrefPFAM:PF08029
DBxrefPFAM:PF01634
ProductATP phosphoribosyltransferase (ATP-PRTase) (ATP-PRT)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:833947..835699 -
Powered by Drupal