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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:856913..860151- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001846-T1 ID=KJC3_001846-T1|Name=KJC3_001846-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3239bp|location=Sequence derived from alignment at ch2:856913..860151- (Aspergillus niger KJC3)
GTTTTCCCGCACTTGCTCCACCATCATGAACAGCCATGATCCCAGTGTCC
ACCAGCACCTCAAGCAACTTAGGTATACTATCTATATCATTAGAATGCTC
GACGGGGCTAATTCTGGGTTGCTTGAATAATAGCCACTATTGCCCGTTAA
CCTAGATAAGTACACTGATGACACCACAACAGATCATCCTGTTCAGCGAT
AGTACTACTATATTTATTACTATTCATATCATCAATCATTCCGGTGGGGA
TATAATACCCTACTATAAGATACTCTCCTATAGTTCTAGTACCGTCTACA
CTCACCCTGTGAACAAAATGCCCTGAACCATCTATTATCAACGCCCTCAA
AGCAATGTCCACGATCACAATATGCTGATAGTACTTCTCCCTCTGACTTG
GGTAGTACAAAGAACTTATGACCCTGTGGAACAACCCCCTCTTTGTGGGC
ATCTTTCATCAGGCGGATATTTCCTCTTCTATTTATAACCTCTCAAAGAA
GGTGTTTAAAGAGATTCGGTCAAACAAGCTCACGTTATAAAGCCCGACTT
CTTCTTCCTTTGCATTATTTGCCCCGAGTATCCCTTCATTTCCAAGCTTT
CTGCGTTCTCCCTCCCTTGCAAGACAACTGAAAGCAGCACACACTAGGAG
CGATATCCTTGGTTACTCAGCAGTACTTGTATTAGTACAATATTGAAGAG
ACTCGCCTGGACACTAATCCAATCTACTGCGAACCACTTCTCGAAATCTT
GGTTAGGTGTTTCGGCTGTCAGAATCATGTCCAAACGTCCATACGATGAC
GATGACGATGACGATGGCGATGACCCATTTGCCTTTCCCCCCAAACCTAA
TCTCTTTGATCAAACAAAATGGGCACCGCATGTGAGCATAGAAGATGCAA
GGATCGCGCATCGTTTCTGGTCACTTCCAGATACTGTACTAGGTGACAGC
CTGGGAGAGCAGCCCCGTTATACCCGGCCCAGGGGTGCGGATGATAATCC
TGCAGCACATGCACTTGCAAGAAATGTCTATGACCACTTGATGCACAACG
AAAGATTCCTAATGCCAGTCAACCCCACAAATTGGCAAAGGGAATGGACC
AATTCCGGGCTGAATAACAGGGTCTGGTCATTCAACGACATCTTTGAAGG
GCAGGGTCTTGATCTTGGGGATACCACGGAAGGTCTTAACGAGGTGGACG
GGCAGCTTATCAGGGATATGAAGGCCCTCCAGCTAAGAGCCGCCCTTGGG
AGCCGGAGCCTCTCAACAGAAGGCACGGTTCCCGTATTACGCCGGCGACT
TCAGGACTATAAACGCCAAGTGTATCATCAATACCGCGCCTTGCCTCGAA
GTGATCTGTCACATTGGGGTATCCAAAGAGATAACGCGCGAAAGTACGCT
ATCGAGATTACCGACGATGATGGCATAGGAGCACTGGATATGTACACTTG
TGCTATTCTTGCCAGCCCATATAACCCAGCTTATTGGCTGAGCCGGGCTT
ACTGCCATTACCAACAGGCGTTTTTTGACCTTGCTATCGGGGATGCTTAT
CGAGCGGAATATCTCTGTGACGTGCTTTATGATACACACCGGCGGAGTCT
TCAACATGGACTCTATACGCGGATATGCCACGCTCTGGAGCAGCATATCA
TGGTTCAACCCCGAGATTCTATCACGGGTAACCTATCCGCGGAAGCTACA
TTACTTCGCAGGTTCAATGGGGTTAATTTTTTCACACCCACTATTCGGAA
GGCCACCCAGCACGTTCTCGCTCTTAGTCTCATGGCGCTCCAGTGTTGGG
ACGACTATAAAACAAAGGAACGTCTTCTTAGAGCAAGGATGATAAATGTG
GACCGGGACTTGATGCCATTCCAAGAGCGCAGAAGGGTCATGGAAGTCGT
TGCGGCCAAAGCCAAGACGACCAAGGAAAACACTGATTACTATTACCATG
AATCACGAGCTGGGAACGCCCCAGGAGACCGGATATATCCCCATGACGCA
GACGACATCGATCGTGCTGCAGTCGCCTTTACGGATAAGGCGACAGATAT
CTTTATCACCCAGAATGAAAGCATCCCTTGGAAGAAATGCAAGATTGCCG
TCAGCGACGATCCAAGCAACACGCAACTGAAAGTGATTGCAACAGAGGAT
ATTACGAAGAACGAGATCATTTTTGTCGAAAATCCCCCCATCAGAGGTCA
CCTCGAGCTGCCAAAGCTGCCAATCAGAGGGTTAGAATTAAGATGTGACA
ACTGCCAAAGAGGCCTGCCCGGTGGGCAGTTGGAAAAGCACGCTCGTGAA
TTTGAACAAGGGAATCTCCGCGAAGCATGCAAATGTATCACACAGCCAGT
CCCCATTCTATTCTGCCCTGCGCCAAATGATAGTGATCCAACTTGCGCCG
AGAATGCTCAAGCACGGTATCACTTTCAAGTCTGTGGTGAAGACTGGGCA
TGGCTACACGACGCCATGCGGCCCATAAAGGTTCTGGACTCCGAAGAACG
TCCTTGTTACAAGTACTCGTGTGAAACACAGTCAACTTTACTGAGTCTCC
TCCTGCGTGAAATATTTGACATCACCCTTCACCGAAGAGAAACCCACGAT
CCCAACCTCATGGCACACGAAATCGACGAACTTGTTGCTCTCGAAGGCCC
CCGAAATTGGACCAATCGAAGATTTCCCTTTAGCTTGACTGCCAATGTCC
ATATTCCCTTCAATATCCTCTTACAACTCGGCGTCGACATCTTCCGCGAC
CTCAGCTTCGACACTTGGGTTATTCAACTGGTTCTGAGGAAGCTCACCGT
CAACGCCATTCCCTGTAGGAGTGACCGTTTCAAATACACGACGATAATCA
AGCATAAAACCTTTCCAAAATGGGAAGACGAGCTGAAGATCGAGGATTTA
CCGTACTTTGATCCCTCTTTCCCCAAGCTATATTTATATCCTGGGCACAG
TCTTTTCAATCATGCGTGTCGTACCAATTTCAACGCCAGCTGGGCCCCCT
ACGGTGACGAGAACCCTAATCTGATGATTCTGTGGTCATTCAAAGACATC
AAGAAAGGTGATGAGATTCGCATCCCGTATTTTTACCCTCTCGATACAGG
CGTCTCCACTAGCATTTTGGAGCGTGCTCTCGGAAGACCTTGCAACTGTG
GCGGACCTCATCTTGATGCAGAATATGTGCCTCCACCAGCACCAGCAAAA
AACAAGCAATCAATAGGAAAGAAAGGGAAACGATCATGA back to topCoding sequence (CDS) from alignment at ch2:856913..860151- >KJC3_001846-T1 ID=KJC3_001846-T1|Name=KJC3_001846-T1|organism=Aspergillus niger KJC3|type=CDS|length=2463bp|location=Sequence derived from alignment at ch2:856913..860151- (Aspergillus niger KJC3)
ATGTCCAAACGTCCATACGATGACGATGACGATGACGATGGCGATGACCC
ATTTGCCTTTCCCCCCAAACCTAATCTCTTTGATCAAACAAAATGGGCAC
CGCATGTGAGCATAGAAGATGCAAGGATCGCGCATCGTTTCTGGTCACTT
CCAGATACTGTACTAGGTGACAGCCTGGGAGAGCAGCCCCGTTATACCCG
GCCCAGGGGTGCGGATGATAATCCTGCAGCACATGCACTTGCAAGAAATG
TCTATGACCACTTGATGCACAACGAAAGATTCCTAATGCCAGTCAACCCC
ACAAATTGGCAAAGGGAATGGACCAATTCCGGGCTGAATAACAGGGTCTG
GTCATTCAACGACATCTTTGAAGGGCAGGGTCTTGATCTTGGGGATACCA
CGGAAGGTCTTAACGAGGTGGACGGGCAGCTTATCAGGGATATGAAGGCC
CTCCAGCTAAGAGCCGCCCTTGGGAGCCGGAGCCTCTCAACAGAAGGCAC
GGTTCCCGTATTACGCCGGCGACTTCAGGACTATAAACGCCAAGTGTATC
ATCAATACCGCGCCTTGCCTCGAAGTGATCTGTCACATTGGGGTATCCAA
AGAGATAACGCGCGAAAGTACGCTATCGAGATTACCGACGATGATGGCAT
AGGAGCACTGGATATGTACACTTGTGCTATTCTTGCCAGCCCATATAACC
CAGCTTATTGGCTGAGCCGGGCTTACTGCCATTACCAACAGGCGTTTTTT
GACCTTGCTATCGGGGATGCTTATCGAGCGGAATATCTCTGTGACGTGCT
TTATGATACACACCGGCGGAGTCTTCAACATGGACTCTATACGCGGATAT
GCCACGCTCTGGAGCAGCATATCATGGTTCAACCCCGAGATTCTATCACG
GGTAACCTATCCGCGGAAGCTACATTACTTCGCAGGTTCAATGGGGTTAA
TTTTTTCACACCCACTATTCGGAAGGCCACCCAGCACGTTCTCGCTCTTA
GTCTCATGGCGCTCCAGTGTTGGGACGACTATAAAACAAAGGAACGTCTT
CTTAGAGCAAGGATGATAAATGTGGACCGGGACTTGATGCCATTCCAAGA
GCGCAGAAGGGTCATGGAAGTCGTTGCGGCCAAAGCCAAGACGACCAAGG
AAAACACTGATTACTATTACCATGAATCACGAGCTGGGAACGCCCCAGGA
GACCGGATATATCCCCATGACGCAGACGACATCGATCGTGCTGCAGTCGC
CTTTACGGATAAGGCGACAGATATCTTTATCACCCAGAATGAAAGCATCC
CTTGGAAGAAATGCAAGATTGCCGTCAGCGACGATCCAAGCAACACGCAA
CTGAAAGTGATTGCAACAGAGGATATTACGAAGAACGAGATCATTTTTGT
CGAAAATCCCCCCATCAGAGGTCACCTCGAGCTGCCAAAGCTGCCAATCA
GAGGGTTAGAATTAAGATGTGACAACTGCCAAAGAGGCCTGCCCGGTGGG
CAGTTGGAAAAGCACGCTCGTGAATTTGAACAAGGGAATCTCCGCGAAGC
ATGCAAATGTATCACACAGCCAGTCCCCATTCTATTCTGCCCTGCGCCAA
ATGATAGTGATCCAACTTGCGCCGAGAATGCTCAAGCACGGTATCACTTT
CAAGTCTGTGGTGAAGACTGGGCATGGCTACACGACGCCATGCGGCCCAT
AAAGGTTCTGGACTCCGAAGAACGTCCTTGTTACAAGTACTCGTGTGAAA
CACAGTCAACTTTACTGAGTCTCCTCCTGCGTGAAATATTTGACATCACC
CTTCACCGAAGAGAAACCCACGATCCCAACCTCATGGCACACGAAATCGA
CGAACTTGTTGCTCTCGAAGGCCCCCGAAATTGGACCAATCGAAGATTTC
CCTTTAGCTTGACTGCCAATGTCCATATTCCCTTCAATATCCTCTTACAA
CTCGGCGTCGACATCTTCCGCGACCTCAGCTTCGACACTTGGGTTATTCA
ACTGGTTCTGAGGAAGCTCACCGTCAACGCCATTCCCTGTAGGAGTGACC
GTTTCAAATACACGACGATAATCAAGCATAAAACCTTTCCAAAATGGGAA
GACGAGCTGAAGATCGAGGATTTACCGTACTTTGATCCCTCTTTCCCCAA
GCTATATTTATATCCTGGGCACAGTCTTTTCAATCATGCGTGTCGTACCA
ATTTCAACGCCAGCTGGGCCCCCTACGGTGACGAGAACCCTAATCTGATG
ATTCTGTGGTCATTCAAAGACATCAAGAAAGGTGATGAGATTCGCATCCC
GTATTTTTACCCTCTCGATACAGGCGTCTCCACTAGCATTTTGGAGCGTG
CTCTCGGAAGACCTTGCAACTGTGGCGGACCTCATCTTGATGCAGAATAT
GTGCCTCCACCAGCACCAGCAAAAAACAAGCAATCAATAGGAAAGAAAGG
GAAACGATCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:856913..860151 - |
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