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KJC3_001856-T1, KJC3_001856-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001856-T1
Unique NameKJC3_001856-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:884510..886783-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001856-T1 ID=KJC3_001856-T1|Name=KJC3_001856-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2274bp|location=Sequence derived from alignment at ch2:884510..886783- (Aspergillus niger KJC3)
CCCGAGTATTGACACCACGCATCCTGGTTGTTTGTGCTGCATTCCCTTGC
ACAACTTTCTGGTTTACCGGTGCGGAGTCTTCCCAAAGATCTCCCCTCTA
TTGTTCTTCCACTCATACTCATCTATTTGGATCTATCTCAACTTCATTCC
TCCATCTTCATTAATCACCGCCTAGCACTGACATTACTGTTTGCAGCTGT
TTGCATCACATTGCCTGCCAGCGACCTTTCTGTTGGGATTCTTGCTGCAT
ACACCCTCCTCCCATCACGGCGATCTCTTGTTTCCCCTCATATTTCTTTC
TTCGTCTCATCCTTAGACCCACCCCAGTGCCGTGCGCCCGCCATGGAAGG
CGACGTGGTAGCACAGTTCACTGAAATCACCGGCTCAAAGCCAGAGCTGG
CTACCCAGTATCTGCAGCTGACTGATTTCAATATTGAGCAGGCCGTACAG
CTTTTCTTCGAGAATGGCGGTGCGCCACTGACTGATGATCCCTTACCGTC
GGCCTCCACGCCACAGCGAGCTTCTCATGCTGGCGGCTATGGAAATGAGT
CTGGGGTAGTCAATGTTGACTCCGATGACGACGTCACAATAGATGAGTCT
CGCTCTGCGCCTCGGAATCACCCATCGCACGACGCTGTGTTTGAAGACGA
TGCAGCTATGGCCCGTCGCCTCCAAGAAGAGATGTACGGCGGAGGAGATG
CTGAAGAGAACGTGCGTGCGCCGATGGCCCGTACAACAGAAACCTTGGTG
GGGCCTGAAGCGGACTTTGACGACGGCGATATGCATGCCAGCATATTGGG
TCAACTGCGCGCGCGCCAGCAGCGAACCAGTCAGCACTTCACCTTGCCCT
TCCATTTCTAGTCTTGTCCAGTCACAGCTGACTTTGCTTCTTCTTAGACC
GACCGGGAATTTTCAACCAACGAGACACATCGATATGGTCTGGAGAGGAC
GATACCTCGGAACGTGAACGTTTGGCCGCAGCGACTGGAGGAGCTTCCGA
GGCGTCGAATAAATCTAATATGTTGGCTGAGATGTACCGCCCCCCTTTCG
AGATCATGTCCAGACTTCCGTGGGATGTCGCTCGTCAGGAAGGTCGCGAC
AATGAGAAGTGGTTGATGGTCAATATCCAGGACCCTTCAGTCTTTGATTG
CCAGGTTCTGAACAGAGACCTCTGGAAGGATGCGGGTGTGAGAGACACCG
TTAAGGAGCATTTTATTTTCATGCAATATTCCAAGGACGACCCTCGCGCG
GGACCGTATCTGCAGTACTACTTTCAGGCGAGCGACGTCTCAGATAATTA
TCCCCACATCGCGATTGTTGACCCCCGGACTGGAGAGCAGATGAAGGTCT
GGTCGGGGCCTCCCGTGATCAAGGCATCGGACTTTCTGATGCAACTCCAC
GAGTTCCTCGATCGATACAGTCTGAAGCACAACGTGAGAAATCCCGTGGC
GAAGCGGAAGCCGGAGAAGAAGGAGAAGAGTATCGATGCGATGACCGAAG
AAGAGATGATGGAGATGGCAATGAGAAACAGTCTAGGGGATGAGGCGTCG
CAAGGCCCGAAGATGGAGGATCCCGACGATCTCACCCGCAGCACCGACGA
TGTGAAGGGTAAGGGACGGGCTGAAGATGTTGGAATGGAAGAGGCCGAAC
AACCTGAACAGAGCGCCTTCTTGTCCATTCCGGACAATCGACCCCACACA
GAGCCCCCTGCCGATCCTGCCACAACCACGCGCATTCAGTTCCGACACCC
GTCGGGGCGAGTGATTCGGCGTTTCGCTTTGACGGATCCTGTCCAGCGGA
TCTACGAATGGCTCAAGGCTGATCCTCCCTTGGCTGATAAAGCTGGCGTG
GAGTTTGAGCTGAATGCCATGGGCCGCAATCTGATTGACTTGTTGGATCA
GACCGTCGCCGATGCTGGACTGAAGAATGGAACGGTCATGATAGGCTATG
TTGAGGAATAGACTGGGATCTGACACTTGAGGAGAGAGTCGGAGATGTCC
AGGACGGGGACCTAAGGAGCAGTCAGGACTGGGGCCTCTTGCTCTTGGGG
TCAATTTGCTGCTCTGCGGGATGGATGTTTGTTTAACACGGATGAGCATC
TCCCTGGGAAGCAAATCGCCGACATCAGGACACCTGAATGGCTCTTTCCA
ATCATGTACATCCGGTCATACTTGATCGAGTAATTGTCCTCTATATCTGC
GAGTCTGCATAAAGAGGAGATCTAATGGCTTCATGAGAAAGAAATCTAAG
AAGAATCACACAATCACCCTTGAT
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Coding sequence (CDS) from alignment at ch2:884510..886783-

>KJC3_001856-T1 ID=KJC3_001856-T1|Name=KJC3_001856-T1|organism=Aspergillus niger KJC3|type=CDS|length=3102bp|location=Sequence derived from alignment at ch2:884510..886783- (Aspergillus niger KJC3)
ACCGACCGGGAATTTTCAACCAACGAGACACATCGATATGGTCTGGAGAG
GACGATACCTCGGAACGTGAACGTTTGGCCGCAGCGACTGGAGGAGCTTC
CGAGGCGTCGAATAAATCTAATATGTTGGCTGAGATGTACCGCCCCCCTT
TCGAGATCATGTCCAGACTTCCGTGGGATGTCGCTCGTCAGGAAGGTCGC
GACAATGAGAAGTGGTTGATGGTCAATATCCAGGACCCTTCAGTCTTTGA
TTGCCAGGTTCTGAACAGAGACCTCTGGAAGGATGCGGGTGTGAGAGACA
CCGTTAAGGAGCATTTTATTTTCATGCAATATTCCAAGGACGACCCTCGC
GCGGGACCGTATCTGCAGTACTACTTTCAGGCGAGCGACGTCTCAGATAA
TTATCCCCACATCGCGATTGTTGACCCCCGGACTGGAGAGCAGATGAAGG
TCTGGTCGGGGCCTCCCGTGATCAAGGCATCGGACTTTCTGATGCAACTC
CACGAGTTCCTCGATCGATACAGTCTGAAGCACAACGTGAGAAATCCCGT
GGCGAAGCGGAAGCCGGAGAAGAAGGAGAAGAGTATCGATGCGATGACCG
AAGAAGAGATGATGGAGATGGCAATGAGAAACAGTCTAGGGGATGAGGCG
TCGCAAGGCCCGAAGATGGAGGATCCCGACGATCTCACCCGCAGCACCGA
CGATGTGAAGGGTAAGGGACGGGCTGAAGATGTTGGAATGGAAGAGGCCG
AACAACCTGAACAGAGCGCCTTCTTGTCCATTCCGGACAATCGACCCCAC
ACAGAGCCCCCTGCCGATCCTGCCACAACCACGCGCATTCAGTTCCGACA
CCCGTCGGGGCGAGTGATTCGGCGTTTCGCTTTGACGGATCCTGTCCAGC
GGATCTACGAATGGCTCAAGGCTGATCCTCCCTTGGCTGATAAAGCTGGC
GTGGAGTTTGAGCTGAATGCCATGGGCCGCAATCTGATTGACTTGTTGGA
TCAGACCGTCGCCGATGCTGGACTGAAGAATGGAACGGTCATGATAGGCT
ATGTTGAGGAATAGATGGAAGGCGACGTGGTAGCACAGTTCACTGAAATC
ACCGGCTCAAAGCCAGAGCTGGCTACCCAGTATCTGCAGCTGACTGATTT
CAATATTGAGCAGGCCGTACAGCTTTTCTTCGAGAATGGCGGTGCGCCAC
TGACTGATGATCCCTTACCGTCGGCCTCCACGCCACAGCGAGCTTCTCAT
GCTGGCGGCTATGGAAATGAGTCTGGGGTAGTCAATGTTGACTCCGATGA
CGACGTCACAATAGATGAGTCTCGCTCTGCGCCTCGGAATCACCCATCGC
ACGACGCTGTGTTTGAAGACGATGCAGCTATGGCCCGTCGCCTCCAAGAA
GAGATGTACGGCGGAGGAGATGCTGAAGAGAACGTGCGTGCGCCGATGGC
CCGTACAACAGAAACCTTGGTGGGGCCTGAAGCGGACTTTGACGACGGCG
ATATGCATGCCAGCATATTGGGTCAACTGCGCGCGCGCCAGCAGCGAACC
AACCGACCGGGAATTTTCAACCAACGAGACACATCGATATGGTCTGGAGA
GGACGATACCTCGGAACGTGAACGTTTGGCCGCAGCGACTGGAGGAGCTT
CCGAGGCGTCGAATAAATCTAATATGTTGGCTGAGATGTACCGCCCCCCT
TTCGAGATCATGTCCAGACTTCCGTGGGATGTCGCTCGTCAGGAAGGTCG
CGACAATGAGAAGTGGTTGATGGTCAATATCCAGGACCCTTCAGTCTTTG
ATTGCCAGGTTCTGAACAGAGACCTCTGGAAGGATGCGGGTGTGAGAGAC
ACCGTTAAGGAGCATTTTATTTTCATGCAATATTCCAAGGACGACCCTCG
CGCGGGACCGTATCTGCAGTACTACTTTCAGGCGAGCGACGTCTCAGATA
ATTATCCCCACATCGCGATTGTTGACCCCCGGACTGGAGAGCAGATGAAG
GTCTGGTCGGGGCCTCCCGTGATCAAGGCATCGGACTTTCTGATGCAACT
CCACGAGTTCCTCGATCGATACAGTCTGAAGCACAACGTGAGAAATCCCG
TGGCGAAGCGGAAGCCGGAGAAGAAGGAGAAGAGTATCGATGCGATGACC
GAAGAAGAGATGATGGAGATGGCAATGAGAAACAGTCTAGGGGATGAGGC
GTCGCAAGGCCCGAAGATGGAGGATCCCGACGATCTCACCCGCAGCACCG
ACGATGTGAAGGGTAAGGGACGGGCTGAAGATGTTGGAATGGAAGAGGCC
GAACAACCTGAACAGAGCGCCTTCTTGTCCATTCCGGACAATCGACCCCA
CACAGAGCCCCCTGCCGATCCTGCCACAACCACGCGCATTCAGTTCCGAC
ACCCGTCGGGGCGAGTGATTCGGCGTTTCGCTTTGACGGATCCTGTCCAG
CGGATCTACGAATGGCTCAAGGCTGATCCTCCCTTGGCTGATAAAGCTGG
CGTGGAGTTTGAGCTGAATGCCATGGGCCGCAATCTGATTGACTTGTTGG
ATCAGACCGTCGCCGATGCTGGACTGAAGAATGGAACGGTCATGATAGGC
TATGTTGAGGAATAGATGGAAGGCGACGTGGTAGCACAGTTCACTGAAAT
CACCGGCTCAAAGCCAGAGCTGGCTACCCAGTATCTGCAGCTGACTGATT
TCAATATTGAGCAGGCCGTACAGCTTTTCTTCGAGAATGGCGGTGCGCCA
CTGACTGATGATCCCTTACCGTCGGCCTCCACGCCACAGCGAGCTTCTCA
TGCTGGCGGCTATGGAAATGAGTCTGGGGTAGTCAATGTTGACTCCGATG
ACGACGTCACAATAGATGAGTCTCGCTCTGCGCCTCGGAATCACCCATCG
CACGACGCTGTGTTTGAAGACGATGCAGCTATGGCCCGTCGCCTCCAAGA
AGAGATGTACGGCGGAGGAGATGCTGAAGAGAACGTGCGTGCGCCGATGG
CCCGTACAACAGAAACCTTGGTGGGGCCTGAAGCGGACTTTGACGACGGC
GATATGCATGCCAGCATATTGGGTCAACTGCGCGCGCGCCAGCAGCGAAC
CA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001856KJC3_001856Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001856-T1KJC3_001856-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001856-T1.cdsKJC3_001856-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001856-T1.utr3p1KJC3_001856-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001856-T1.exon2KJC3_001856-T1.exon2Aspergillus niger KJC3exon
KJC3_001856-T1.exon1KJC3_001856-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001856-T1.utr5p1KJC3_001856-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR001012
DBxrefInterPro:IPR006577
DBxrefPFAM:PF00789
DBxrefPFAM:PF14555
DBxrefPFAM:PF13899
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:884510..886783 -
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