|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:887040..889230+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001857-T1 ID=KJC3_001857-T1|Name=KJC3_001857-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2191bp|location=Sequence derived from alignment at ch2:887040..889230+ (Aspergillus niger KJC3)
CGTGGATACTACTAAGTAGTGTTACCTCCACTCCAACTACTACGACTGCT
CTAACATTCTCCCCAATACCCGCTCCTTCCCTTCCATCATTGATCATCTA
TCTCCTTCTCATCTTATATAAGTCGGTTGCTCTTGCCAGTTACCATCGGA
CCTATCATATCATGGCTGCTTCGGTCCTCGGTAAGCGCCAGCGAGGTGCT
ATCGAACCGGAAGGTACGACTTCGGTCTCATCAAGTCCCTTTGCGATTCA
GTTCAGATCGTATAGCTAACATCCCACTCTATCAGTTCCATCATTACCAG
TGCGTCGAGCAAGCAGACGCCGGACACAACAACCTCGCGTCCGTGAAGGC
AGCGAGCCTCCTGCACCCCAACCGCGCCAACTTCGGTCACGGACGAGAAA
TGGCAATGGCACCACTATTCAAGAAGAGCCCCAGGAAGAACCAAAGAATG
ACTTGGTCGAAAGTGGACAGACAAAGCGTACAGTGCAGGTTGGCAAGACG
GCCATATCACCGGTTAAGCGCAGCCATGCTACAGATCCGGTCAATGGTTG
GAGTTCTCCCCTGATTTTGCTGTTGAACTAAGACTGATTGATCTAGACGA
AAACTCGACGCCAGTTGAGCTCAAGACACCTTCGAAATCAAGGTTCCGCG
ATGCACTTGATTCCCCTCCTCCGACAACACCGAAACACCGCGTTCAGATC
GGCGGGAAATCAATGACCCCGCGCACACCTCGACACATATCGACGCCAAC
CACCACGCAAACCATATACTCCGAAGCAAGGCAAATGTTTGCGCGCGGAG
CAACTTCGACTCGGATAGTGGGTCGGGATACCGAACGGGAGAAATTGACC
TCGTTTATACAAGATGGGGTTGATTCGGGCAAAGGTGGTTGTCTGTATGT
CAGTGGTCCCCCGGGTACTGGAAAGAGTGCCTTGGTTCAGGAAGTGTGTC
ACGACATGGACTTGAAGTCTCTCAAAATCGCACACCTCAATTGCGCGAGT
ATGCGAGGTGCTCGTGACGTCTACAGCAGGCTTATCGGCGATCTCTGCAA
CGACCATGATGTTTTCAAGAAGAGTGAACCAGATCGGCTACGACTGATGT
TCACATCCGACGAGAATGACGATCTGTTTCTAGTCACTCTGGACGAGATC
GATCACCTCCTCACCGCGGATTCCGGTATCCTTCAGTCTTTGTTTGAGTG
GTCGTTGCAGGAAAAGTCTAGACTCATGCTCATTGGTATTGCCAATGCGC
TAGACCTAACTGATCGATCACTCCCGCAATTGAAGGCCAAGAACTTGAAG
CCTCGTTTGCTTCCCTTTTTGCCCTACAATGCTGGCCAGATTGCCAGCGT
AATCACCAATCGTCTTCGCTCTTTACTTCCTGAAGGTCAAACTGTGGACC
CCAATTTTGTTCCTTTTGTTCAACCAGCAGCTATTCAACTGTGCTCGAAG
AAGGTGGCATCGCAGACTGGCGATCTACGGAAGGCGTTCGAATTGGTTAA
GCGTGCCATTGATCTTATTCAACAAGAAGCTCTCAAAAAGCTCGAGGCAC
AAAATGCCAACCCCGAGAGTCCATCCAAAACAATCCTTGTTGAGAACAAC
AATCTTTCCTCATCGTCAAAATCTTCTTCACCTAAACAGACCCCTGCATT
ATCTTATACAGCTATCACAGCGCCGCGAGCCAGCATTGCTCATGTTGCGC
GTATCACTTCGGCGGCATTCGGACAAGGGACAGTTCAGCGACTACAGGGG
CTCAACCTTCAGCAGAAGGCAGCCATCTGTGCCTTGATTGCCCTGGACCG
GAAGCGGCGGCAAGGTGAATTTCCAGGCACACCATCCAAGACCAAGCATT
TGCCGCCGACGATCAAGCAAGTGTACGACACATATTGTACCTTGTGTCGG
CAAGACAATATCCTACACCCTCTTACATCTACCGAATTCAAGGACGTGCT
CAGCAACCTGGAGACGATGGGTCTTGTGGGTGAATATCAAGGCCGCGGTC
GTGGTGGCACAGTCGCTGGCGGGTCAGATCTGCGACGCAGTCCTTCCAAG
CTCCACGGGCCGATGACACCCAGCAAAGCCTTGGATGAGCAGAGCCTGGT
TTGTTTCGTGTCTCAAAAGGAGATTGAGACACAACTTACCGGAGCGGGAG
AGGGTATCCTCAGAAGGCTGCTCACCGGCCAAGGGTTGTAA back to topCoding sequence (CDS) from alignment at ch2:887040..889230+ >KJC3_001857-T1 ID=KJC3_001857-T1|Name=KJC3_001857-T1|organism=Aspergillus niger KJC3|type=CDS|length=5724bp|location=Sequence derived from alignment at ch2:887040..889230+ (Aspergillus niger KJC3)
ATGGCTGCTTCGGTCCTCGGTAAGCGCCAGCGAGGTGCTATCGAACCGGA
AGTTCCATCATTACCAGTGCGTCGAGCAAGCAGACGCCGGACACAACAAC
CTCGCGTCCGTGAAGGCAGCGAGCCTCCTGCACCCCAACCGCGCCAACTT
CGGTCACGGACGAGAAATGGCAATGGCACCACTATTCAAGAAGAGCCCCA
GGAAGAACCAAAGAATGACTTGGTCGAAAGTGGACAGACAAAGCGTACAG
TGCAGGTTGGCAAGACGGCCATATCACCGGTTAAGCGCAGCCATGCTACA
GATCCGGTCAATGACGAAAACTCGACGCCAGTTGAGCTCAAGACACCTTC
GAAATCAAGGTTCCGCGATGCACTTGATTCCCCTCCTCCGACAACACCGA
AACACCGCGTTCAGATCGGCGGGAAATCAATGACCCCGCGCACACCTCGA
CACATATCGACGCCAACCACCACGCAAACCATATACTCCGAAGCAAGGCA
AATGTTTGCGCGCGGAGCAACTTCGACTCGGATAGTGGGTCGGGATACCG
AACGGGAGAAATTGACCTCGTTTATACAAGATGGGGTTGATTCGGGCAAA
GGTGGTTGTCTGTATGTCAGTGGTCCCCCGGGTACTGGAAAGAGTGCCTT
GGTTCAGGAAGTGTGTCACGACATGGACTTGAAGTCTCTCAAAATCGCAC
ACCTCAATTGCGCGAGTATGCGAGGTGCTCGTGACGTCTACAGCAGGCTT
ATCGGCGATCTCTGCAACGACCATGATGTTTTCAAGAAGAGTGAACCAGA
TCGGCTACGACTGATGTTCACATCCGACGAGAATGACGATCTGTTTCTAG
TCACTCTGGACGAGATCGATCACCTCCTCACCGCGGATTCCGGTATCCTT
CAGTCTTTGTTTGAGTGGTCGTTGCAGGAAAAGTCTAGACTCATGCTCAT
TGGTATTGCCAATGCGCTAGACCTAACTGATCGATCACTCCCGCAATTGA
AGGCCAAGAACTTGAAGCCTCGTTTGCTTCCCTTTTTGCCCTACAATGCT
GGCCAGATTGCCAGCGTAATCACCAATCGTCTTCGCTCTTTACTTCCTGA
AGGTCAAACTGTGGACCCCAATTTTGTTCCTTTTGTTCAACCAGCAGCTA
TTCAACTGTGCTCGAAGAAGGTGGCATCGCAGACTGGCGATCTACGGAAG
GCGTTCGAATTGGTTAAGCGTGCCATTGATCTTATTCAACAAGAAGCTCT
CAAAAAGCTCGAGGCACAAAATGCCAACCCCGAGAGTCCATCCAAAACAA
TCCTTGTTGAGAACAACAATCTTTCCTCATCGTCAAAATCTTCTTCACCT
AAACAGACCCCTGCATTATCTTATACAGCTATCACAGCGCCGCGAGCCAG
CATTGCTCATGTTGCGCGTATCACTTCGGCGGCATTCGGACAAGGGACAG
TTCAGCGACTACAGGGGCTCAACCTTCAGCAGAAGGCAGCCATCTGTGCC
TTGATTGCCCTGGACCGGAAGCGGCGGCAAGGTGAATTTCCAGGCACACC
ATCCAAGACCAAGCATTTGCCGCCGACGATCAAGCAAGTGTACGACACAT
ATTGTACCTTGTGTCGGCAAGACAATATCCTACACCCTCTTACATCTACC
GAATTCAAGGACGTGCTCAGCAACCTGGAGACGATGGGTCTTGTGGGTGA
ATATCAAGGCCGCGGTCGTGGTGGCACAGTCGCTGGCGGGTCAGATCTGC
GACGCAGTCCTTCCAAGCTCCACGGGCCGATGACACCCAGCAAAGCCTTG
GATGAGCAGAGCCTGGTTTGTTTCGTGTCTCAAAAGGAGATTGAGACACA
ACTTACCGGAGCGGGAGAGGGTATCCTCAGAAGGCTGCTCACCGGCCAAG
GGTTGTAAATGGCTGCTTCGGTCCTCGGTAAGCGCCAGCGAGGTGCTATC
GAACCGGAAGTTCCATCATTACCAGTGCGTCGAGCAAGCAGACGCCGGAC
ACAACAACCTCGCGTCCGTGAAGGCAGCGAGCCTCCTGCACCCCAACCGC
GCCAACTTCGGTCACGGACGAGAAATGGCAATGGCACCACTATTCAAGAA
GAGCCCCAGGAAGAACCAAAGAATGACTTGGTCGAAAGTGGACAGACAAA
GCGTACAGTGCAGGTTGGCAAGACGGCCATATCACCGGTTAAGCGCAGCC
ATGCTACAGATCCGGTCAATGACGAAAACTCGACGCCAGTTGAGCTCAAG
ACACCTTCGAAATCAAGGTTCCGCGATGCACTTGATTCCCCTCCTCCGAC
AACACCGAAACACCGCGTTCAGATCGGCGGGAAATCAATGACCCCGCGCA
CACCTCGACACATATCGACGCCAACCACCACGCAAACCATATACTCCGAA
GCAAGGCAAATGTTTGCGCGCGGAGCAACTTCGACTCGGATAGTGGGTCG
GGATACCGAACGGGAGAAATTGACCTCGTTTATACAAGATGGGGTTGATT
CGGGCAAAGGTGGTTGTCTGTATGTCAGTGGTCCCCCGGGTACTGGAAAG
AGTGCCTTGGTTCAGGAAGTGTGTCACGACATGGACTTGAAGTCTCTCAA
AATCGCACACCTCAATTGCGCGAGTATGCGAGGTGCTCGTGACGTCTACA
GCAGGCTTATCGGCGATCTCTGCAACGACCATGATGTTTTCAAGAAGAGT
GAACCAGATCGGCTACGACTGATGTTCACATCCGACGAGAATGACGATCT
GTTTCTAGTCACTCTGGACGAGATCGATCACCTCCTCACCGCGGATTCCG
GTATCCTTCAGTCTTTGTTTGAGTGGTCGTTGCAGGAAAAGTCTAGACTC
ATGCTCATTGGTATTGCCAATGCGCTAGACCTAACTGATCGATCACTCCC
GCAATTGAAGGCCAAGAACTTGAAGCCTCGTTTGCTTCCCTTTTTGCCCT
ACAATGCTGGCCAGATTGCCAGCGTAATCACCAATCGTCTTCGCTCTTTA
CTTCCTGAAGGTCAAACTGTGGACCCCAATTTTGTTCCTTTTGTTCAACC
AGCAGCTATTCAACTGTGCTCGAAGAAGGTGGCATCGCAGACTGGCGATC
TACGGAAGGCGTTCGAATTGGTTAAGCGTGCCATTGATCTTATTCAACAA
GAAGCTCTCAAAAAGCTCGAGGCACAAAATGCCAACCCCGAGAGTCCATC
CAAAACAATCCTTGTTGAGAACAACAATCTTTCCTCATCGTCAAAATCTT
CTTCACCTAAACAGACCCCTGCATTATCTTATACAGCTATCACAGCGCCG
CGAGCCAGCATTGCTCATGTTGCGCGTATCACTTCGGCGGCATTCGGACA
AGGGACAGTTCAGCGACTACAGGGGCTCAACCTTCAGCAGAAGGCAGCCA
TCTGTGCCTTGATTGCCCTGGACCGGAAGCGGCGGCAAGGTGAATTTCCA
GGCACACCATCCAAGACCAAGCATTTGCCGCCGACGATCAAGCAAGTGTA
CGACACATATTGTACCTTGTGTCGGCAAGACAATATCCTACACCCTCTTA
CATCTACCGAATTCAAGGACGTGCTCAGCAACCTGGAGACGATGGGTCTT
GTGGGTGAATATCAAGGCCGCGGTCGTGGTGGCACAGTCGCTGGCGGGTC
AGATCTGCGACGCAGTCCTTCCAAGCTCCACGGGCCGATGACACCCAGCA
AAGCCTTGGATGAGCAGAGCCTGGTTTGTTTCGTGTCTCAAAAGGAGATT
GAGACACAACTTACCGGAGCGGGAGAGGGTATCCTCAGAAGGCTGCTCAC
CGGCCAAGGGTTGTAAATGGCTGCTTCGGTCCTCGGTAAGCGCCAGCGAG
GTGCTATCGAACCGGAAGTTCCATCATTACCAGTGCGTCGAGCAAGCAGA
CGCCGGACACAACAACCTCGCGTCCGTGAAGGCAGCGAGCCTCCTGCACC
CCAACCGCGCCAACTTCGGTCACGGACGAGAAATGGCAATGGCACCACTA
TTCAAGAAGAGCCCCAGGAAGAACCAAAGAATGACTTGGTCGAAAGTGGA
CAGACAAAGCGTACAGTGCAGGTTGGCAAGACGGCCATATCACCGGTTAA
GCGCAGCCATGCTACAGATCCGGTCAATGACGAAAACTCGACGCCAGTTG
AGCTCAAGACACCTTCGAAATCAAGGTTCCGCGATGCACTTGATTCCCCT
CCTCCGACAACACCGAAACACCGCGTTCAGATCGGCGGGAAATCAATGAC
CCCGCGCACACCTCGACACATATCGACGCCAACCACCACGCAAACCATAT
ACTCCGAAGCAAGGCAAATGTTTGCGCGCGGAGCAACTTCGACTCGGATA
GTGGGTCGGGATACCGAACGGGAGAAATTGACCTCGTTTATACAAGATGG
GGTTGATTCGGGCAAAGGTGGTTGTCTGTATGTCAGTGGTCCCCCGGGTA
CTGGAAAGAGTGCCTTGGTTCAGGAAGTGTGTCACGACATGGACTTGAAG
TCTCTCAAAATCGCACACCTCAATTGCGCGAGTATGCGAGGTGCTCGTGA
CGTCTACAGCAGGCTTATCGGCGATCTCTGCAACGACCATGATGTTTTCA
AGAAGAGTGAACCAGATCGGCTACGACTGATGTTCACATCCGACGAGAAT
GACGATCTGTTTCTAGTCACTCTGGACGAGATCGATCACCTCCTCACCGC
GGATTCCGGTATCCTTCAGTCTTTGTTTGAGTGGTCGTTGCAGGAAAAGT
CTAGACTCATGCTCATTGGTATTGCCAATGCGCTAGACCTAACTGATCGA
TCACTCCCGCAATTGAAGGCCAAGAACTTGAAGCCTCGTTTGCTTCCCTT
TTTGCCCTACAATGCTGGCCAGATTGCCAGCGTAATCACCAATCGTCTTC
GCTCTTTACTTCCTGAAGGTCAAACTGTGGACCCCAATTTTGTTCCTTTT
GTTCAACCAGCAGCTATTCAACTGTGCTCGAAGAAGGTGGCATCGCAGAC
TGGCGATCTACGGAAGGCGTTCGAATTGGTTAAGCGTGCCATTGATCTTA
TTCAACAAGAAGCTCTCAAAAAGCTCGAGGCACAAAATGCCAACCCCGAG
AGTCCATCCAAAACAATCCTTGTTGAGAACAACAATCTTTCCTCATCGTC
AAAATCTTCTTCACCTAAACAGACCCCTGCATTATCTTATACAGCTATCA
CAGCGCCGCGAGCCAGCATTGCTCATGTTGCGCGTATCACTTCGGCGGCA
TTCGGACAAGGGACAGTTCAGCGACTACAGGGGCTCAACCTTCAGCAGAA
GGCAGCCATCTGTGCCTTGATTGCCCTGGACCGGAAGCGGCGGCAAGGTG
AATTTCCAGGCACACCATCCAAGACCAAGCATTTGCCGCCGACGATCAAG
CAAGTGTACGACACATATTGTACCTTGTGTCGGCAAGACAATATCCTACA
CCCTCTTACATCTACCGAATTCAAGGACGTGCTCAGCAACCTGGAGACGA
TGGGTCTTGTGGGTGAATATCAAGGCCGCGGTCGTGGTGGCACAGTCGCT
GGCGGGTCAGATCTGCGACGCAGTCCTTCCAAGCTCCACGGGCCGATGAC
ACCCAGCAAAGCCTTGGATGAGCAGAGCCTGGTTTGTTTCGTGTCTCAAA
AGGAGATTGAGACACAACTTACCGGAGCGGGAGAGGGTATCCTCAGAAGG
CTGCTCACCGGCCAAGGGTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006270 | DNA replication initiation |
| GO:0051301 | cell division |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001857-T1.utr5p1 | KJC3_001857-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR003959 |
| DBxref | InterPro:IPR016314 |
| DBxref | InterPro:IPR015163 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF09079 |
| DBxref | PFAM:PF13401 |
| DBxref | PFAM:PF00004 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:887040..889230 + |
|
