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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:906955..909733+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001863-T1 ID=KJC3_001863-T1|Name=KJC3_001863-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2779bp|location=Sequence derived from alignment at ch2:906955..909733+ (Aspergillus niger KJC3)
TAAACTGCTTCGCTGGTCATGATTTGAGTGCCCTTTGTGGTCGTCAACCT
CACCCCCGAGTCGCTCCTTGATCTCCCCCCCTCCTCCCCCCTTCGCCCGA
TCAGTCACTGTCGCTACATACTCTTCACTACTGGCTCCGTGCCTCGAGCC
TCAACTCGAGTCACTCCGAACCCTCCCTCTCGGTCTCCCTCTGGTGCTGA
ATTACCGGCGCCGCCGTCTCTTCAATGGAATATGGGTGTCGATCAACATG
CTCAATTGGATCGCTTCAGTCTCTTCCTTCCCTTCCCCTATCGTGTGGCG
GTAATACTGCTGGCTGGTATGCTACCCCCCCTTGGATGATCCCCCCCTCC
TCTTATCCCCGGCATTTCATTCTGGCTAACATTCGTTATCGATAGGTTTC
TGGGGTTGGGGTGTTAATCTGCAGTACCTCCTAAAGGCAAATATTGTGGG
TGATGCCCCTCCTTCTCCCTCCTCATCCTCCTTCCCTCCGCCTTCTTTTT
TCTCTATAGTTATATACTTTCGCTGACTGGCATCTCTTAGGATGTCCCTT
CCCTGATTAAATACCCTGCTCGACAATCCTCCAGTCAACGCCCGCATTAT
GCCTCGACATACCAGCTGTCCACTCTCCTGACCATCCCGCTCGCCATCTC
CCTCCTTATCTTCTGGCCCGCCACCCATGGCTCCGCGGAACGCGTCGAGG
CGGTGGAATTTATTCCGCAATCATACTTCTTCATAGGACTGTTTATCCTC
ATCCTGCCCTTTCATCGAATCGCGCGCTCGGGCCGATATCGGTTCTTCAT
GACCCTGAAGCGCATCAGTCTTGGAGGTCTGGCGGAAGCGCAAGATGGCA
AATTCGGGGATATTCTGCTGGCAGATGCTCTGACAAGTTATTCTAGAGTC
TTCGCGGACTTGGTTGTTACCTTCTGCATGTTCTTTACCACGGACGTCTC
CAGCACGTCCAAGCCCACCCGCAAGTGTCGCACGAACGACTACGTCGTTC
CCTTGATCATCGCTTTCCCCAGTATCATTCGACTGCGCCAATGTCTCATT
GAATACTTGCGTGTGCGTCGGGCTACCCAGCGTAGCCAAGGCGCGGGCAG
CCAGGGTGGCCAGCACTTGGCTAACGCCCTGAAGTACGCCACCGCGTTTC
CAGTCATCATCCTGGCAGCCAAGTTGAAGAACTACAACCCTCTGGATTTT
TACGGCTACAGTGAGATGAGCCTTTCGCGGCTTTTGTACGTGCTTTACAT
CTGTTTCCCGTCTTCTGCCAGTGGCTCCTGCTAACCGCGCTCTTTCAACT
ACAGGTTCTTCTTCACATTCATCAACTCCGCATACTCCTTCTATTGGGAC
ATCACCAAGGATTGGGATTTGACCCTTTTTACTCCGGCACGCCGTAGCCA
CGAACACCCATACGGACTGCGCCGCCATCGCTACTTCACCAACCGACAGT
ACTACCTCGCGATCATCATTGATCTGGCCATCCGTTTCTCCTGGCTCTCT
AGATATGTGCCCGGATTTGTCTGGATGAGTGAGACCGAATTTGGAATTTT
TGTCCTCATGTTCTCCGAGGTCGCCCGTCGGTGGATGTGGGTTTTCCTCC
GCGTCGAGGCCGAGTGGAGTAAGTCACCCATCCATCTCACAAGCACGTTA
CCGTGGCACCTTTCAACTGACTCGTGGCAATCAACAACAGTACGGAACAG
CCGCGGTCCTGCCCCAGACGATATCCTCCTTGGCGAGTTTGGCGGCAAAT
TGGACGCAGACTGAAATCATGCCGCCTTGCCGCACCTTTCTCCTTGTCAA
GGGGGCTTCTCACCCAATTCTCTATAAACTGACATGATTTTTGTGTATCC
AACATTGTAGCCAGCATTCATTGTTATTGTGATTACGTATGTGAGAACAT
CTTTCTTCCTTCTGCCTCTTTCTCCTGCCTTTTTCCCACTTCTTGGCTTG
GTTTGCGGCGTCTTGGACCCATCCGGCCCTTTCACTTCTTCCAATTTGAC
TTGACTTGATTTGGATTAGCTTGGCTCCGTTCCTACTATACACTTGTCTG
TTTTATACACACCTATATTTACATTCTTCTTTTCCTTTTTCTATTGGGCG
GCGGAGAGGCGTCTGTATCATATTATATTGGGCAAGAATAAGGGAAGGGA
GTGTTGCGGAGCAGTTCTTGTGTTGTTTCGTATACGCTAAACGTATAGTA
TAAATCCTCAGTCTGCTTTTTTTGTTTATCCCATTTCATTATTTCCTATA
TCTTATTCTTTTTTTCCTTTCTTACCATTCTCTTCGGGCTCTTCATTTCT
TTCGCTGTAATGACTTTCCTTTATTATTGGGTACCTAATACTCATTCTGG
AACTCGCTAGGGTAAGGAAGGACTGCGGGTTGGTCAAAGTGCTGGCTGGT
GCGATAATCGGGACTGTCGTGGGACAGTGCGCTCGCTTAACTGGTAATAC
TAATGGTAATCATTAATAAGATGCGTGCTTTTCTTTCCACTGATGGAGGT
TACAGTAATAGCATGGACGCCAAATGGAAGGAAGAGAAGCAAAACATACT
AGATAATGATAGAAGGGCGGAACAATAAATAACTAGACAGACACTCGTTG
ATCGTGAAAGGGGATTAGCCAACATTATGGAACTGGAAATGAACAATATA
CAATACAGTAATAAACATATGACAGGAAGGGAAGTGGAAAGGATGAACAA
ACAAGGGATCTGCATAATGGAGAAAATGCCAAACTATACAACACAGCAAA
GGAGATAATAGGAATGGGAAAAAGAAAAA back to topCoding sequence (CDS) from alignment at ch2:906955..909733+ >KJC3_001863-T1 ID=KJC3_001863-T1|Name=KJC3_001863-T1|organism=Aspergillus niger KJC3|type=CDS|length=6090bp|location=Sequence derived from alignment at ch2:906955..909733+ (Aspergillus niger KJC3)
ATGGGTGTCGATCAACATGCTCAATTGGATCGCTTCAGTCTCTTCCTTCC
CTTCCCCTATCGTGTGGCGGTAATACTGCTGGCTGGTTTCTGGGGTTGGG
GTGTTAATCTGCAGTACCTCCTAAAGGCAAATATTGATGTCCCTTCCCTG
ATTAAATACCCTGCTCGACAATCCTCCAGTCAACGCCCGCATTATGCCTC
GACATACCAGCTGTCCACTCTCCTGACCATCCCGCTCGCCATCTCCCTCC
TTATCTTCTGGCCCGCCACCCATGGCTCCGCGGAACGCGTCGAGGCGGTG
GAATTTATTCCGCAATCATACTTCTTCATAGGACTGTTTATCCTCATCCT
GCCCTTTCATCGAATCGCGCGCTCGGGCCGATATCGGTTCTTCATGACCC
TGAAGCGCATCAGTCTTGGAGGTCTGGCGGAAGCGCAAGATGGCAAATTC
GGGGATATTCTGCTGGCAGATGCTCTGACAAGTTATTCTAGAGTCTTCGC
GGACTTGGTTGTTACCTTCTGCATGTTCTTTACCACGGACGTCTCCAGCA
CGTCCAAGCCCACCCGCAAGTGTCGCACGAACGACTACGTCGTTCCCTTG
ATCATCGCTTTCCCCAGTATCATTCGACTGCGCCAATGTCTCATTGAATA
CTTGCGTGTGCGTCGGGCTACCCAGCGTAGCCAAGGCGCGGGCAGCCAGG
GTGGCCAGCACTTGGCTAACGCCCTGAAGTACGCCACCGCGTTTCCAGTC
ATCATCCTGGCAGCCAAGTTGAAGAACTACAACCCTCTGGATTTTTACGG
CTACAGTGAGATGAGCCTTTCGCGGCTTTTGTTCTTCTTCACATTCATCA
ACTCCGCATACTCCTTCTATTGGGACATCACCAAGGATTGGGATTTGACC
CTTTTTACTCCGGCACGCCGTAGCCACGAACACCCATACGGACTGCGCCG
CCATCGCTACTTCACCAACCGACAGTACTACCTCGCGATCATCATTGATC
TGGCCATCCGTTTCTCCTGGCTCTCTAGATATGTGCCCGGATTTGTCTGG
ATGAGTGAGACCGAATTTGGAATTTTTGTCCTCATGTTCTCCGAGGTCGC
CCGTCGGTGGATGTGGGTTTTCCTCCGCGTCGAGGCCGAGTGGATACGGA
ACAGCCGCGGTCCTGCCCCAGACGATATCCTCCTTGGCGAGTTTGGCGGC
AAATTGGACGCAGACTGAATGGGTGTCGATCAACATGCTCAATTGGATCG
CTTCAGTCTCTTCCTTCCCTTCCCCTATCGTGTGGCGGTAATACTGCTGG
CTGGTTTCTGGGGTTGGGGTGTTAATCTGCAGTACCTCCTAAAGGCAAAT
ATTGATGTCCCTTCCCTGATTAAATACCCTGCTCGACAATCCTCCAGTCA
ACGCCCGCATTATGCCTCGACATACCAGCTGTCCACTCTCCTGACCATCC
CGCTCGCCATCTCCCTCCTTATCTTCTGGCCCGCCACCCATGGCTCCGCG
GAACGCGTCGAGGCGGTGGAATTTATTCCGCAATCATACTTCTTCATAGG
ACTGTTTATCCTCATCCTGCCCTTTCATCGAATCGCGCGCTCGGGCCGAT
ATCGGTTCTTCATGACCCTGAAGCGCATCAGTCTTGGAGGTCTGGCGGAA
GCGCAAGATGGCAAATTCGGGGATATTCTGCTGGCAGATGCTCTGACAAG
TTATTCTAGAGTCTTCGCGGACTTGGTTGTTACCTTCTGCATGTTCTTTA
CCACGGACGTCTCCAGCACGTCCAAGCCCACCCGCAAGTGTCGCACGAAC
GACTACGTCGTTCCCTTGATCATCGCTTTCCCCAGTATCATTCGACTGCG
CCAATGTCTCATTGAATACTTGCGTGTGCGTCGGGCTACCCAGCGTAGCC
AAGGCGCGGGCAGCCAGGGTGGCCAGCACTTGGCTAACGCCCTGAAGTAC
GCCACCGCGTTTCCAGTCATCATCCTGGCAGCCAAGTTGAAGAACTACAA
CCCTCTGGATTTTTACGGCTACAGTGAGATGAGCCTTTCGCGGCTTTTGT
TCTTCTTCACATTCATCAACTCCGCATACTCCTTCTATTGGGACATCACC
AAGGATTGGGATTTGACCCTTTTTACTCCGGCACGCCGTAGCCACGAACA
CCCATACGGACTGCGCCGCCATCGCTACTTCACCAACCGACAGTACTACC
TCGCGATCATCATTGATCTGGCCATCCGTTTCTCCTGGCTCTCTAGATAT
GTGCCCGGATTTGTCTGGATGAGTGAGACCGAATTTGGAATTTTTGTCCT
CATGTTCTCCGAGGTCGCCCGTCGGTGGATGTGGGTTTTCCTCCGCGTCG
AGGCCGAGTGGATACGGAACAGCCGCGGTCCTGCCCCAGACGATATCCTC
CTTGGCGAGTTTGGCGGCAAATTGGACGCAGACTGAATGGGTGTCGATCA
ACATGCTCAATTGGATCGCTTCAGTCTCTTCCTTCCCTTCCCCTATCGTG
TGGCGGTAATACTGCTGGCTGGTTTCTGGGGTTGGGGTGTTAATCTGCAG
TACCTCCTAAAGGCAAATATTGATGTCCCTTCCCTGATTAAATACCCTGC
TCGACAATCCTCCAGTCAACGCCCGCATTATGCCTCGACATACCAGCTGT
CCACTCTCCTGACCATCCCGCTCGCCATCTCCCTCCTTATCTTCTGGCCC
GCCACCCATGGCTCCGCGGAACGCGTCGAGGCGGTGGAATTTATTCCGCA
ATCATACTTCTTCATAGGACTGTTTATCCTCATCCTGCCCTTTCATCGAA
TCGCGCGCTCGGGCCGATATCGGTTCTTCATGACCCTGAAGCGCATCAGT
CTTGGAGGTCTGGCGGAAGCGCAAGATGGCAAATTCGGGGATATTCTGCT
GGCAGATGCTCTGACAAGTTATTCTAGAGTCTTCGCGGACTTGGTTGTTA
CCTTCTGCATGTTCTTTACCACGGACGTCTCCAGCACGTCCAAGCCCACC
CGCAAGTGTCGCACGAACGACTACGTCGTTCCCTTGATCATCGCTTTCCC
CAGTATCATTCGACTGCGCCAATGTCTCATTGAATACTTGCGTGTGCGTC
GGGCTACCCAGCGTAGCCAAGGCGCGGGCAGCCAGGGTGGCCAGCACTTG
GCTAACGCCCTGAAGTACGCCACCGCGTTTCCAGTCATCATCCTGGCAGC
CAAGTTGAAGAACTACAACCCTCTGGATTTTTACGGCTACAGTGAGATGA
GCCTTTCGCGGCTTTTGTTCTTCTTCACATTCATCAACTCCGCATACTCC
TTCTATTGGGACATCACCAAGGATTGGGATTTGACCCTTTTTACTCCGGC
ACGCCGTAGCCACGAACACCCATACGGACTGCGCCGCCATCGCTACTTCA
CCAACCGACAGTACTACCTCGCGATCATCATTGATCTGGCCATCCGTTTC
TCCTGGCTCTCTAGATATGTGCCCGGATTTGTCTGGATGAGTGAGACCGA
ATTTGGAATTTTTGTCCTCATGTTCTCCGAGGTCGCCCGTCGGTGGATGT
GGGTTTTCCTCCGCGTCGAGGCCGAGTGGATACGGAACAGCCGCGGTCCT
GCCCCAGACGATATCCTCCTTGGCGAGTTTGGCGGCAAATTGGACGCAGA
CTGAATGGGTGTCGATCAACATGCTCAATTGGATCGCTTCAGTCTCTTCC
TTCCCTTCCCCTATCGTGTGGCGGTAATACTGCTGGCTGGTTTCTGGGGT
TGGGGTGTTAATCTGCAGTACCTCCTAAAGGCAAATATTGATGTCCCTTC
CCTGATTAAATACCCTGCTCGACAATCCTCCAGTCAACGCCCGCATTATG
CCTCGACATACCAGCTGTCCACTCTCCTGACCATCCCGCTCGCCATCTCC
CTCCTTATCTTCTGGCCCGCCACCCATGGCTCCGCGGAACGCGTCGAGGC
GGTGGAATTTATTCCGCAATCATACTTCTTCATAGGACTGTTTATCCTCA
TCCTGCCCTTTCATCGAATCGCGCGCTCGGGCCGATATCGGTTCTTCATG
ACCCTGAAGCGCATCAGTCTTGGAGGTCTGGCGGAAGCGCAAGATGGCAA
ATTCGGGGATATTCTGCTGGCAGATGCTCTGACAAGTTATTCTAGAGTCT
TCGCGGACTTGGTTGTTACCTTCTGCATGTTCTTTACCACGGACGTCTCC
AGCACGTCCAAGCCCACCCGCAAGTGTCGCACGAACGACTACGTCGTTCC
CTTGATCATCGCTTTCCCCAGTATCATTCGACTGCGCCAATGTCTCATTG
AATACTTGCGTGTGCGTCGGGCTACCCAGCGTAGCCAAGGCGCGGGCAGC
CAGGGTGGCCAGCACTTGGCTAACGCCCTGAAGTACGCCACCGCGTTTCC
AGTCATCATCCTGGCAGCCAAGTTGAAGAACTACAACCCTCTGGATTTTT
ACGGCTACAGTGAGATGAGCCTTTCGCGGCTTTTGTTCTTCTTCACATTC
ATCAACTCCGCATACTCCTTCTATTGGGACATCACCAAGGATTGGGATTT
GACCCTTTTTACTCCGGCACGCCGTAGCCACGAACACCCATACGGACTGC
GCCGCCATCGCTACTTCACCAACCGACAGTACTACCTCGCGATCATCATT
GATCTGGCCATCCGTTTCTCCTGGCTCTCTAGATATGTGCCCGGATTTGT
CTGGATGAGTGAGACCGAATTTGGAATTTTTGTCCTCATGTTCTCCGAGG
TCGCCCGTCGGTGGATGTGGGTTTTCCTCCGCGTCGAGGCCGAGTGGATA
CGGAACAGCCGCGGTCCTGCCCCAGACGATATCCTCCTTGGCGAGTTTGG
CGGCAAATTGGACGCAGACTGAATGGGTGTCGATCAACATGCTCAATTGG
ATCGCTTCAGTCTCTTCCTTCCCTTCCCCTATCGTGTGGCGGTAATACTG
CTGGCTGGTTTCTGGGGTTGGGGTGTTAATCTGCAGTACCTCCTAAAGGC
AAATATTGATGTCCCTTCCCTGATTAAATACCCTGCTCGACAATCCTCCA
GTCAACGCCCGCATTATGCCTCGACATACCAGCTGTCCACTCTCCTGACC
ATCCCGCTCGCCATCTCCCTCCTTATCTTCTGGCCCGCCACCCATGGCTC
CGCGGAACGCGTCGAGGCGGTGGAATTTATTCCGCAATCATACTTCTTCA
TAGGACTGTTTATCCTCATCCTGCCCTTTCATCGAATCGCGCGCTCGGGC
CGATATCGGTTCTTCATGACCCTGAAGCGCATCAGTCTTGGAGGTCTGGC
GGAAGCGCAAGATGGCAAATTCGGGGATATTCTGCTGGCAGATGCTCTGA
CAAGTTATTCTAGAGTCTTCGCGGACTTGGTTGTTACCTTCTGCATGTTC
TTTACCACGGACGTCTCCAGCACGTCCAAGCCCACCCGCAAGTGTCGCAC
GAACGACTACGTCGTTCCCTTGATCATCGCTTTCCCCAGTATCATTCGAC
TGCGCCAATGTCTCATTGAATACTTGCGTGTGCGTCGGGCTACCCAGCGT
AGCCAAGGCGCGGGCAGCCAGGGTGGCCAGCACTTGGCTAACGCCCTGAA
GTACGCCACCGCGTTTCCAGTCATCATCCTGGCAGCCAAGTTGAAGAACT
ACAACCCTCTGGATTTTTACGGCTACAGTGAGATGAGCCTTTCGCGGCTT
TTGTTCTTCTTCACATTCATCAACTCCGCATACTCCTTCTATTGGGACAT
CACCAAGGATTGGGATTTGACCCTTTTTACTCCGGCACGCCGTAGCCACG
AACACCCATACGGACTGCGCCGCCATCGCTACTTCACCAACCGACAGTAC
TACCTCGCGATCATCATTGATCTGGCCATCCGTTTCTCCTGGCTCTCTAG
ATATGTGCCCGGATTTGTCTGGATGAGTGAGACCGAATTTGGAATTTTTG
TCCTCATGTTCTCCGAGGTCGCCCGTCGGTGGATGTGGGTTTTCCTCCGC
GTCGAGGCCGAGTGGATACGGAACAGCCGCGGTCCTGCCCCAGACGATAT
CCTCCTTGGCGAGTTTGGCGGCAAATTGGACGCAGACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001863-T1.utr5p1 | KJC3_001863-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001863-T1.utr3p1 | KJC3_001863-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004342 |
| DBxref | PFAM:PF03124 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:906955..909733 + |
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