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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:915279..917672+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001868-T1 ID=KJC3_001868-T1|Name=KJC3_001868-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2394bp|location=Sequence derived from alignment at ch2:915279..917672+ (Aspergillus niger KJC3)
ACCGCCCCGAAAACATCTCGGTTGCGTGACGCTGCATCTAGAACCATGTC
GACAAGGTCCGCTCTCCTTCCTTCTGTGCTGACGCGCCGCTTCCAATACC
TTTAGCTCCGACCGCCAATACAATCTTACGCCAGTCGACTCTCTTTATCG
TTGAATGAGCCGTGTGAATACATAACTGCCACCATGTTGGCTGTACGCGA
CCAAGAAAACCTGGTCCACTCTCACCAGACCGTTGCCGCGTCGAAACCAC
TCAATCAAGGCGTGAGACATTTGCAACCCAAGACCCCCGGCGCTCGAGTA
CCAAAAACGCCATTTAAAGTGCCTTTGAGGAATGATGAGAACGATCCACT
GGCCTTTGGGAAGAAAACCGTGAAGGGGGGGAAACAGAAGGAGAATATCA
ACTTGACTACGAAAAATGCCTTTGTCACTCCGTCGGGTACGCAATGGAAA
TCCACGACCATGTCCAAGTCGCATGACTTGATCCTTGCCATCTGCTATTC
GTAAGGCTAACACGCGTTGCAGCAGATCCTCGTCAGCGTGCCCCTCTTGG
CATGAAGACGACAAATGCCAAAGCCAAGGGATTGCAGACGCCAGCACCTC
CTGGAGTGACGATGAAGCCAGAGAGAACCATCAAAAGAGGTTCCACCCAG
AGAGCGAAGAAATTCGCTCCCTTTGTACAGCCAAGCCAGCCGGAAGTCCA
GGCGAAACCGGTAGAAGATGATGTCCCTGACATTGAGTATATGCCGCCCA
AACCCAAAGGTTAGTAGTAGTTCCGCGGGATTTTCGCCTTTATCAAGAAG
TCCGTTGTCTCTGATTTCATCGCAGACCTTCCTGATATTCCGGATGATGT
CACTTATGATACTACATTTCCGCAATTCCTGCCGAAAAACCTCGCTAGAG
GGTTGGAAAGCGTGTATGGAGATAATGAGGTTGGACCCGATGGGCTCACG
AAGCGCGAGCGGAAATTTCAAGAAGACTCAGCTGCTTGCGACAGAATGGT
TGAGGAGATGATTCGGAAGCAAGTTGAGAGCATTGGCTTCGAGGAAACGT
ACGAGACCGTTCCAGCTGAGGAGCCGCCTGCAGCAGACGCTACGCAACGC
CGGATCGAAACGCGCTCGCGAACGAGAGCGGCCAACAACAAGAAGAAACA
TACCAGCAATATCTCCACAGTTCGAGCTCGTGATGCTGCTGCTGCTCTGT
CCGGGACACAGCGTTCTATCCCACGCACCAGACCCGCTGTTTCGGCCAAG
CCTAGGGTCACTTCTTCCTTGTTCCCGTCTAAGAGATCAAGAGAACCGAC
CAATCCGTCGAGTATGCGGCAAACGGCCGCTGCTGCAACTTCCCAGACGA
CAGTGGGATACAGTAGGGGTCGCGAAGTTTCGTCCAAGTTGCATGGCAGG
ACGGCCAGTCCAACAGAGCCGGACACAGTCCCCCAAGGAATACTATCACC
CGACACCTATCTGCAGCCCTGTGGGACTCCACCACTGATCGCCGACACCA
TCGGGCTAGACTTGGAGAATGCGGAGGAGGGTCTTCCAACATTTGACGAA
GATGAGGAAGCTCAAAACTTCCAGTTAACGCTGTGACGTGTGATGTGTGA
AGAACTAAGGCGAATACAGAGGTCTACTTCCGGCGTATCATATGGGGTTC
AATGGGTTCATGGTAGATGAGTGGTGTTATTTTTTTGCTTTTCCGGTCTA
CTTATTTTTGTGTCGTCCATGTTTCGTTGCGCCCGCCACTGTGTAGGTAT
TCTTTTTCAGAAGAAACCCGATAGTGTCAGCAAAACGGAGCAGTGGACCT
GAAAGGGGGGCGTTATACGGAGTAGTTATGATGTATCTACGATGGGTTAC
TGTGTTACTATCCTGTTATGACTTGACGAGTCCCACGGAAGACCCCGGCG
TGGGGCTTGTCCCTATTTGAGCAAGAAATTGGGCTGTATGATTAATGGAC
ACGTTATCCTCCCCGGCGGCCCTTGAGAGTCAAAACATTCGTAATGGACC
CTCCTGTAGTGGATGTTGCCGGCCCTCAAACAGTGGTTCACTCCCAAGCT
AACCGTTTGATGGCTCAGTTGGTTAAGCTGGTTAAGGGGCACCTTCACTT
GCCAGGCCCATGACTAAGCCCACTGGACCAAGCAAAAGGGGCCACGCACC
GCAGTTGGGTTTCAGACCCGATGAATAGACCAAATGCCAACCTTGGATAG
GGAAATTGAGATCGGTGATAAAGATAGTAACTCATTAGGAGGTGTCCTGG
TTCCCGACCGCGGAACCTGAGAAGGTTGTACCTGTTCTGGGTTGTTTATT
AAAGGCATCCTCGGTCCCGAATAGTACTTTTGCCAACTCTTCGCAAGACA
GAGAGAAGTGAGAGAGAGCCCCAATATACTAAATCGATACTAAC back to topCoding sequence (CDS) from alignment at ch2:915279..917672+ >KJC3_001868-T1 ID=KJC3_001868-T1|Name=KJC3_001868-T1|organism=Aspergillus niger KJC3|type=CDS|length=3753bp|location=Sequence derived from alignment at ch2:915279..917672+ (Aspergillus niger KJC3)
ATGTTGGCTGTACGCGACCAAGAAAACCTGGTCCACTCTCACCAGACCGT
TGCCGCGTCGAAACCACTCAATCAAGGCGTGAGACATTTGCAACCCAAGA
CCCCCGGCGCTCGAGTACCAAAAACGCCATTTAAAGTGCCTTTGAGGAAT
GATGAGAACGATCCACTGGCCTTTGGGAAGAAAACCGTGAAGGGGGGGAA
ACAGAAGGAGAATATCAACTTGACTACGAAAAATGCCTTTGTCACTCCGT
CGGCAGATCCTCGTCAGCGTGCCCCTCTTGGCATGAAGACGACAAATGCC
AAAGCCAAGGGATTGCAGACGCCAGCACCTCCTGGAGTGACGATGAAGCC
AGAGAGAACCATCAAAAGAGGTTCCACCCAGAGAGCGAAGAAATTCGCTC
CCTTTGTACAGCCAAGCCAGCCGGAAGTCCAGGCGAAACCGGTAGAAGAT
GATGTCCCTGACATTGAGTATATGCCGCCCAAACCCAAAGACCTTCCTGA
TATTCCGGATGATGTCACTTATGATACTACATTTCCGCAATTCCTGCCGA
AAAACCTCGCTAGAGGGTTGGAAAGCGTGTATGGAGATAATGAGGTTGGA
CCCGATGGGCTCACGAAGCGCGAGCGGAAATTTCAAGAAGACTCAGCTGC
TTGCGACAGAATGGTTGAGGAGATGATTCGGAAGCAAGTTGAGAGCATTG
GCTTCGAGGAAACGTACGAGACCGTTCCAGCTGAGGAGCCGCCTGCAGCA
GACGCTACGCAACGCCGGATCGAAACGCGCTCGCGAACGAGAGCGGCCAA
CAACAAGAAGAAACATACCAGCAATATCTCCACAGTTCGAGCTCGTGATG
CTGCTGCTGCTCTGTCCGGGACACAGCGTTCTATCCCACGCACCAGACCC
GCTGTTTCGGCCAAGCCTAGGGTCACTTCTTCCTTGTTCCCGTCTAAGAG
ATCAAGAGAACCGACCAATCCGTCGAGTATGCGGCAAACGGCCGCTGCTG
CAACTTCCCAGACGACAGTGGGATACAGTAGGGGTCGCGAAGTTTCGTCC
AAGTTGCATGGCAGGACGGCCAGTCCAACAGAGCCGGACACAGTCCCCCA
AGGAATACTATCACCCGACACCTATCTGCAGCCCTGTGGGACTCCACCAC
TGATCGCCGACACCATCGGGCTAGACTTGGAGAATGCGGAGGAGGGTCTT
CCAACATTTGACGAAGATGAGGAAGCTCAAAACTTCCAGTTAACGCTGTG
AATGTTGGCTGTACGCGACCAAGAAAACCTGGTCCACTCTCACCAGACCG
TTGCCGCGTCGAAACCACTCAATCAAGGCGTGAGACATTTGCAACCCAAG
ACCCCCGGCGCTCGAGTACCAAAAACGCCATTTAAAGTGCCTTTGAGGAA
TGATGAGAACGATCCACTGGCCTTTGGGAAGAAAACCGTGAAGGGGGGGA
AACAGAAGGAGAATATCAACTTGACTACGAAAAATGCCTTTGTCACTCCG
TCGGCAGATCCTCGTCAGCGTGCCCCTCTTGGCATGAAGACGACAAATGC
CAAAGCCAAGGGATTGCAGACGCCAGCACCTCCTGGAGTGACGATGAAGC
CAGAGAGAACCATCAAAAGAGGTTCCACCCAGAGAGCGAAGAAATTCGCT
CCCTTTGTACAGCCAAGCCAGCCGGAAGTCCAGGCGAAACCGGTAGAAGA
TGATGTCCCTGACATTGAGTATATGCCGCCCAAACCCAAAGACCTTCCTG
ATATTCCGGATGATGTCACTTATGATACTACATTTCCGCAATTCCTGCCG
AAAAACCTCGCTAGAGGGTTGGAAAGCGTGTATGGAGATAATGAGGTTGG
ACCCGATGGGCTCACGAAGCGCGAGCGGAAATTTCAAGAAGACTCAGCTG
CTTGCGACAGAATGGTTGAGGAGATGATTCGGAAGCAAGTTGAGAGCATT
GGCTTCGAGGAAACGTACGAGACCGTTCCAGCTGAGGAGCCGCCTGCAGC
AGACGCTACGCAACGCCGGATCGAAACGCGCTCGCGAACGAGAGCGGCCA
ACAACAAGAAGAAACATACCAGCAATATCTCCACAGTTCGAGCTCGTGAT
GCTGCTGCTGCTCTGTCCGGGACACAGCGTTCTATCCCACGCACCAGACC
CGCTGTTTCGGCCAAGCCTAGGGTCACTTCTTCCTTGTTCCCGTCTAAGA
GATCAAGAGAACCGACCAATCCGTCGAGTATGCGGCAAACGGCCGCTGCT
GCAACTTCCCAGACGACAGTGGGATACAGTAGGGGTCGCGAAGTTTCGTC
CAAGTTGCATGGCAGGACGGCCAGTCCAACAGAGCCGGACACAGTCCCCC
AAGGAATACTATCACCCGACACCTATCTGCAGCCCTGTGGGACTCCACCA
CTGATCGCCGACACCATCGGGCTAGACTTGGAGAATGCGGAGGAGGGTCT
TCCAACATTTGACGAAGATGAGGAAGCTCAAAACTTCCAGTTAACGCTGT
GAATGTTGGCTGTACGCGACCAAGAAAACCTGGTCCACTCTCACCAGACC
GTTGCCGCGTCGAAACCACTCAATCAAGGCGTGAGACATTTGCAACCCAA
GACCCCCGGCGCTCGAGTACCAAAAACGCCATTTAAAGTGCCTTTGAGGA
ATGATGAGAACGATCCACTGGCCTTTGGGAAGAAAACCGTGAAGGGGGGG
AAACAGAAGGAGAATATCAACTTGACTACGAAAAATGCCTTTGTCACTCC
GTCGGCAGATCCTCGTCAGCGTGCCCCTCTTGGCATGAAGACGACAAATG
CCAAAGCCAAGGGATTGCAGACGCCAGCACCTCCTGGAGTGACGATGAAG
CCAGAGAGAACCATCAAAAGAGGTTCCACCCAGAGAGCGAAGAAATTCGC
TCCCTTTGTACAGCCAAGCCAGCCGGAAGTCCAGGCGAAACCGGTAGAAG
ATGATGTCCCTGACATTGAGTATATGCCGCCCAAACCCAAAGACCTTCCT
GATATTCCGGATGATGTCACTTATGATACTACATTTCCGCAATTCCTGCC
GAAAAACCTCGCTAGAGGGTTGGAAAGCGTGTATGGAGATAATGAGGTTG
GACCCGATGGGCTCACGAAGCGCGAGCGGAAATTTCAAGAAGACTCAGCT
GCTTGCGACAGAATGGTTGAGGAGATGATTCGGAAGCAAGTTGAGAGCAT
TGGCTTCGAGGAAACGTACGAGACCGTTCCAGCTGAGGAGCCGCCTGCAG
CAGACGCTACGCAACGCCGGATCGAAACGCGCTCGCGAACGAGAGCGGCC
AACAACAAGAAGAAACATACCAGCAATATCTCCACAGTTCGAGCTCGTGA
TGCTGCTGCTGCTCTGTCCGGGACACAGCGTTCTATCCCACGCACCAGAC
CCGCTGTTTCGGCCAAGCCTAGGGTCACTTCTTCCTTGTTCCCGTCTAAG
AGATCAAGAGAACCGACCAATCCGTCGAGTATGCGGCAAACGGCCGCTGC
TGCAACTTCCCAGACGACAGTGGGATACAGTAGGGGTCGCGAAGTTTCGT
CCAAGTTGCATGGCAGGACGGCCAGTCCAACAGAGCCGGACACAGTCCCC
CAAGGAATACTATCACCCGACACCTATCTGCAGCCCTGTGGGACTCCACC
ACTGATCGCCGACACCATCGGGCTAGACTTGGAGAATGCGGAGGAGGGTC
TTCCAACATTTGACGAAGATGAGGAAGCTCAAAACTTCCAGTTAACGCTG
TGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001868-T1.utr5p1 | KJC3_001868-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001868-T1.utr3p1 | KJC3_001868-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:915279..917672 + |
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