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KJC3_001871-T1, KJC3_001871-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001871-T1
Unique NameKJC3_001871-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:923424..924981-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001871-T1 ID=KJC3_001871-T1|Name=KJC3_001871-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1558bp|location=Sequence derived from alignment at ch2:923424..924981- (Aspergillus niger KJC3)
ATGGCATCCAACCAAGACCAAGACCTCGAAGCATGCCCCAAAACCCTCAC
CCCCAACCCTCCCATCAAGGCCGAAGCCTCCAAAGATCCCAACCTCGTCA
CCTGGAACAGCCCTAATGACCCAGGAAATCCCAAGAATTGGCCGAGAGGC
CTAAAGTGGCAGAATACGTGGTCGGTTTCGCTTTTCGTCTTCATCTCGCC
CGTGTCGTCATCAATGATCGCCCCGGCCATGAATGATCTCGCGCAGTCGC
TGGACATGCATGCGGAAATTGAGATATATCTTTCATTGAGTATCTTTATT
CTCGCGTATGCCATCGGCCCTGTTTTCTTTGGTCCGGCGTCGGAATTATA
CGGTCGAGTGCGTTTACTCCAACTCAGCAATGTGTGGTATCTGGCCTGGA
ATCTGGGATGCGGGTTCGCGAGGACGAAGGGACAGCTTTTTGCGTTTCGG
TTTTTGGCGGGGATTGGGGGGAGTGCGCCGCTGGCTATTGGAGGGGGGAC
TATTAGGTGAGTGAATTATATTCAAAGATGGATTTGAATATATATTTTCA
ATCGGCATTTGCACTCCACTGACTTCAACTGGTAGTGATATGTGGTCCGC
GGAAGAACGGGGGAAAGCTATGGGGGTGTATACTCTGGGGCCATTACTGG
GGCCTGTGATTGGACCGATTGCGGGCGGGTTCATTGCCGAGTATTCGACC
TGGCGATGGGTGTTTTGGGCTACTTCTGCTGCTGCTGTCGCAGTGCAGGT
AGTTGGGGTTTTCTGGTTGAGAGAGTGCCATCCGGGGACGATTTTACGGA
GGAGACGAGACGTTCTTGCTAAGGAAACAGGAAATGAGGAGCTTCATACC
GCGGAGAAAGTTGAGACACTCGGCTTCAAGCTCCTTCATGCGTTTGAGCG
GCCGGTGCGGATGTTCACGACTCAGCCCATTGTCTTCTGTATAGCGCTTT
ATATGGCCTATCTCTTCGGCGTGACGTACATGATGTTTGCGACCTTCCCG
GATATCTGGACCGACGTCTACCACGAGAGCTCTGGGATTGGGGGCCTCAA
TTATCTCTCCATCGCGATTGGAGCGTTCATCGGGCTCTTCTTTAACCTCA
AGCTCGTGGACCGTATCTACAGGACTCTCAAAGCCCGGAACAATAATATA
GGCAAACCCGAGTTTCGAATGCCGTCGTTGGCTGTGGGCTCGATCATCAG
TACTATCGGGCTCTTCTGGTATGGTTGGAGCATTGGGAATACCCATTGGA
TTATGCCGAATATCGGTGCGCTGATTTACACCATGGGCACCATCTCCTGC
CTGCAGGGCATGCAGACGTATATTGTTGACAGCTATCAAACCTACGCAGC
TAGCGCTATGGCTGCCTGTGCCGTGCTGAGGAGTTTGTGCGGCTTCGGAT
TCCCGCTGTTTGCTCCCTATATGTATAACGCCCTGGGGTATGGTTGGGGC
ACCAGTGTGTTGGCTTTTACGGCCATGATTTTCGGATGGGGAGGGCCGTT
TGTTTTCTGGAAATACGGGCCCCGGTTGCGTGCCATGTCTGAATATGCCT
CTGGTTGA
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Coding sequence (CDS) from alignment at ch2:923424..924981-

>KJC3_001871-T1 ID=KJC3_001871-T1|Name=KJC3_001871-T1|organism=Aspergillus niger KJC3|type=CDS|length=2958bp|location=Sequence derived from alignment at ch2:923424..924981- (Aspergillus niger KJC3)
TGATATGTGGTCCGCGGAAGAACGGGGGAAAGCTATGGGGGTGTATACTC
TGGGGCCATTACTGGGGCCTGTGATTGGACCGATTGCGGGCGGGTTCATT
GCCGAGTATTCGACCTGGCGATGGGTGTTTTGGGCTACTTCTGCTGCTGC
TGTCGCAGTGCAGGTAGTTGGGGTTTTCTGGTTGAGAGAGTGCCATCCGG
GGACGATTTTACGGAGGAGACGAGACGTTCTTGCTAAGGAAACAGGAAAT
GAGGAGCTTCATACCGCGGAGAAAGTTGAGACACTCGGCTTCAAGCTCCT
TCATGCGTTTGAGCGGCCGGTGCGGATGTTCACGACTCAGCCCATTGTCT
TCTGTATAGCGCTTTATATGGCCTATCTCTTCGGCGTGACGTACATGATG
TTTGCGACCTTCCCGGATATCTGGACCGACGTCTACCACGAGAGCTCTGG
GATTGGGGGCCTCAATTATCTCTCCATCGCGATTGGAGCGTTCATCGGGC
TCTTCTTTAACCTCAAGCTCGTGGACCGTATCTACAGGACTCTCAAAGCC
CGGAACAATAATATAGGCAAACCCGAGTTTCGAATGCCGTCGTTGGCTGT
GGGCTCGATCATCAGTACTATCGGGCTCTTCTGGTATGGTTGGAGCATTG
GGAATACCCATTGGATTATGCCGAATATCGGTGCGCTGATTTACACCATG
GGCACCATCTCCTGCCTGCAGGGCATGCAGACGTATATTGTTGACAGCTA
TCAAACCTACGCAGCTAGCGCTATGGCTGCCTGTGCCGTGCTGAGGAGTT
TGTGCGGCTTCGGATTCCCGCTGTTTGCTCCCTATATGTATAACGCCCTG
GGGTATGGTTGGGGCACCAGTGTGTTGGCTTTTACGGCCATGATTTTCGG
ATGGGGAGGGCCGTTTGTTTTCTGGAAATACGGGCCCCGGTTGCGTGCCA
TGTCTGAATATGCCTCTGGTTGAATGGCATCCAACCAAGACCAAGACCTC
GAAGCATGCCCCAAAACCCTCACCCCCAACCCTCCCATCAAGGCCGAAGC
CTCCAAAGATCCCAACCTCGTCACCTGGAACAGCCCTAATGACCCAGGAA
ATCCCAAGAATTGGCCGAGAGGCCTAAAGTGGCAGAATACGTGGTCGGTT
TCGCTTTTCGTCTTCATCTCGCCCGTGTCGTCATCAATGATCGCCCCGGC
CATGAATGATCTCGCGCAGTCGCTGGACATGCATGCGGAAATTGAGATAT
ATCTTTCATTGAGTATCTTTATTCTCGCGTATGCCATCGGCCCTGTTTTC
TTTGGTCCGGCGTCGGAATTATACGGTCGAGTGCGTTTACTCCAACTCAG
CAATGTGTGGTATCTGGCCTGGAATCTGGGATGCGGGTTCGCGAGGACGA
AGGGACAGCTTTTTGCGTTTCGGTTTTTGGCGGGGATTGGGGGGAGTGCG
CCGCTGGCTATTGGAGGGGGGACTATTAGTGATATGTGGTCCGCGGAAGA
ACGGGGGAAAGCTATGGGGGTGTATACTCTGGGGCCATTACTGGGGCCTG
TGATTGGACCGATTGCGGGCGGGTTCATTGCCGAGTATTCGACCTGGCGA
TGGGTGTTTTGGGCTACTTCTGCTGCTGCTGTCGCAGTGCAGGTAGTTGG
GGTTTTCTGGTTGAGAGAGTGCCATCCGGGGACGATTTTACGGAGGAGAC
GAGACGTTCTTGCTAAGGAAACAGGAAATGAGGAGCTTCATACCGCGGAG
AAAGTTGAGACACTCGGCTTCAAGCTCCTTCATGCGTTTGAGCGGCCGGT
GCGGATGTTCACGACTCAGCCCATTGTCTTCTGTATAGCGCTTTATATGG
CCTATCTCTTCGGCGTGACGTACATGATGTTTGCGACCTTCCCGGATATC
TGGACCGACGTCTACCACGAGAGCTCTGGGATTGGGGGCCTCAATTATCT
CTCCATCGCGATTGGAGCGTTCATCGGGCTCTTCTTTAACCTCAAGCTCG
TGGACCGTATCTACAGGACTCTCAAAGCCCGGAACAATAATATAGGCAAA
CCCGAGTTTCGAATGCCGTCGTTGGCTGTGGGCTCGATCATCAGTACTAT
CGGGCTCTTCTGGTATGGTTGGAGCATTGGGAATACCCATTGGATTATGC
CGAATATCGGTGCGCTGATTTACACCATGGGCACCATCTCCTGCCTGCAG
GGCATGCAGACGTATATTGTTGACAGCTATCAAACCTACGCAGCTAGCGC
TATGGCTGCCTGTGCCGTGCTGAGGAGTTTGTGCGGCTTCGGATTCCCGC
TGTTTGCTCCCTATATGTATAACGCCCTGGGGTATGGTTGGGGCACCAGT
GTGTTGGCTTTTACGGCCATGATTTTCGGATGGGGAGGGCCGTTTGTTTT
CTGGAAATACGGGCCCCGGTTGCGTGCCATGTCTGAATATGCCTCTGGTT
GAATGGCATCCAACCAAGACCAAGACCTCGAAGCATGCCCCAAAACCCTC
ACCCCCAACCCTCCCATCAAGGCCGAAGCCTCCAAAGATCCCAACCTCGT
CACCTGGAACAGCCCTAATGACCCAGGAAATCCCAAGAATTGGCCGAGAG
GCCTAAAGTGGCAGAATACGTGGTCGGTTTCGCTTTTCGTCTTCATCTCG
CCCGTGTCGTCATCAATGATCGCCCCGGCCATGAATGATCTCGCGCAGTC
GCTGGACATGCATGCGGAAATTGAGATATATCTTTCATTGAGTATCTTTA
TTCTCGCGTATGCCATCGGCCCTGTTTTCTTTGGTCCGGCGTCGGAATTA
TACGGTCGAGTGCGTTTACTCCAACTCAGCAATGTGTGGTATCTGGCCTG
GAATCTGGGATGCGGGTTCGCGAGGACGAAGGGACAGCTTTTTGCGTTTC
GGTTTTTGGCGGGGATTGGGGGGAGTGCGCCGCTGGCTATTGGAGGGGGG
ACTATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001871KJC3_001871Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001871-T1KJC3_001871-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001871-T1.cdsKJC3_001871-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001871-T1.exon2KJC3_001871-T1.exon2Aspergillus niger KJC3exon
KJC3_001871-T1.exon1KJC3_001871-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:923424..924981 -
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