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KJC3_001874-T2, KJC3_001874-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001874-T2
Unique NameKJC3_001874-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:930897..933477-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001874-T2 ID=KJC3_001874-T2|Name=KJC3_001874-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2581bp|location=Sequence derived from alignment at ch2:930897..933477- (Aspergillus niger KJC3)
CGAAAAGCTTCAATTCTCAGCTGCACCCGCGGATCTCTGGCTATTCCCCC
CTTCCATCCCCGCAGATGATCGGCCTCCAGAGACCTTGTCTCTAACTTTT
GGTCCCCCATCTTTCGTTGGGCCCGACCAGCATTTATTGTGTGTCTCTCG
CCCTTTTCCTTCTCCTCTCTCTTCTCCGCGTCTCACCGCCCGCAATGACC
TTGGATGCATATGACGTCTCTGTTGTTGGATGGCAGCTCTCGGTAGGTGA
TACAAACAAATGCACTTTCTGACTCTGACAACTCTCCACTTCTTACATCC
TTCGAATACCTGGTCCACGTGGACGAGCCACTCTCATCCCACTACCGCCC
CGAATACTAATGTCGCGACAGAAGATATTCCGTGGATAGATTCCATGGCC
CCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCCGACGGTCGC
TGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGAGACAGC
GCTCCAGCATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCCACGCCC
CCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTATTCTCCCCTT
GAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTTGGCAGA
GCTTCCTGCTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGCGACGTG
ATCGTTACTTGGACCGGGCCACTCCTTGTGGTCATTAGCCTTATTCTGGG
CATGTACTGGAGACGCTACTCCCCGCTGTCATCGAGGGCTCACTTGAGTG
AGAAGCAAGGCCATCAGAGGGCTGCTTCGGAGACATTTCCCCATCGGCAT
GAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTACCACACGTTG
CAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTATCCACGC
AGAGGACGGCGACTTCTGCCACTACCCGACCAGCTCTGACGACATTATTC
TTTCGAATCCTCTTCGTGACTCCAATTTGGATCGCCTTGACTCTTCCGCC
GTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTTGGCACCATCA
TTCTCACCTATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATTCTTTGG
CGATCGTTAACAATCCGCCGGGTGTGCTCTATAATTACGGGGCTATCCTT
CTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCC
ATGCAATGAGCATTGCGACAAGACGTCGAGGAGACTCCTCCGGTGTACGA
TTTACCTTTGTCATCTATGAAAACCAACGTCGTTGGCTTGGGATCGGCTG
GACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATT
TAAATCACGTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTCGCAAAC
GGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCGTATTGAAGG
GGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGG
TCTACTATGACAATAAGGTGGGACACATTGTTTCCCATTTTCTGACAAAT
GTCCAGGTGCCAGGGTTACTAACAGCATGGGAACAGTGGAATGACGGTCG
TCGTGGCCAGGATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTC
GTGACGCCGAACTAGTTGAGATTCCATCAGCGGGCGAGAGCACCTCAGTG
GAGACTAAATCGGGGATCGCTCAATCATTGGAGCAGGAAAAGGCAGCTAA
CGCCCACGAAAAAGAAATCTCATCTACGGTCGACGCCGACGCAGAAAGTC
TCGCCCCGTCAACCTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGT
ACGAAGAGTGTAAGCGACAAAGCCAGCAGCATCTCCTCTGCTCCACCAAC
GTCCACGAATAACTCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCC
CTACCGGCAGCTACACGCCAACTGGGAAGTCCACCGCAACTGCAACCCGA
CCCATCAGTATTCCGCACGCCCGGAAGATGTCCAATCACTCGGGAGGCAG
CGCCAGTCACAGCAGCAGCTTCGGTCGTGAGGGAAGTATCAGGGAGAAAG
AGATGTCTCTTGCTCAGGATCGTCTGGACCGCTGGGGCACTCGCGCCACG
GGGGGTACTGAACGAGCCGAGCGAGAGATGGGGCTAGGTGATGAGGTCAA
TATGGGATTGAGCTGAGCTACTGAGTCATGGAGCAGGAGGTGAAGCACAC
TGCGACTGGTGGCATCTCAAGAGAATGGCATTTTTTTTATTCAGAGCGGA
CTTGTTATTAATGATTTCGGGCTTTTATTTTGCGTCAGGCGGACGGGTGT
TTTGGGTACTTCCTTTCTTAGCTTATATTCTTATTCTGTGCAGTTTAACG
CCTTGACGAAACGGAGATACCCTTGTTTACCCAAGAGAAGATCGAACTTG
AAGGCTAAATGCTCGGAATAGTGTGCGGTAGTTGACGATTTCTAAGACTG
GTAACAGTAGTACCCGAAGTGTATTTCGGTG
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Coding sequence (CDS) from alignment at ch2:930897..933477-

>KJC3_001874-T2 ID=KJC3_001874-T2|Name=KJC3_001874-T2|organism=Aspergillus niger KJC3|type=CDS|length=3606bp|location=Sequence derived from alignment at ch2:930897..933477- (Aspergillus niger KJC3)
TGGAATGACGGTCGTCGTGGCCAGGATGGTTGGGATCGATACACCCGTCG
TCGGAAGTGGTGTCGTGACGCCGAACTAGTTGAGATTCCATCAGCGGGCG
AGAGCACCTCAGTGGAGACTAAATCGGGGATCGCTCAATCATTGGAGCAG
GAAAAGGCAGCTAACGCCCACGAAAAAGAAATCTCATCTACGGTCGACGC
CGACGCAGAAAGTCTCGCCCCGTCAACCTCATCCAAGTCCCGCAAACGAC
GTTGGTTTGGGAGTACGAAGAGTGTAAGCGACAAAGCCAGCAGCATCTCC
TCTGCTCCACCAACGTCCACGAATAACTCCTCCGTAGATCTCGGAAAATT
AAAGTCCGCCACCCCTACCGGCAGCTACACGCCAACTGGGAAGTCCACCG
CAACTGCAACCCGACCCATCAGTATTCCGCACGCCCGGAAGATGTCCAAT
CACTCGGGAGGCAGCGCCAGTCACAGCAGCAGCTTCGGTCGTGAGGGAAG
TATCAGGGAGAAAGAGATGTCTCTTGCTCAGGATCGTCTGGACCGCTGGG
GCACTCGCGCCACGGGGGGTACTGAACGAGCCGAGCGAGAGATGGGGCTA
GGTGATGAGGTCAATATGGGATTGAGCTGAATGGCCCCATCATCATCCAC
GCAGGACCATGCTGACTCTCAGCCTCCGACGGTCGCTGCTTTCTCCCCCA
CCACCATCTCAGGCTCGTCCGTGACATCGAGACAGCGCTCCAGCATCATC
GTGCATCGCAAATCGCCGCTACTGGTGGCCACGCCCCCTCAGATCACCCG
GGCATTGGCCTACTCGCATCCGTTTATTCTCCCCTTGAACAAGCTCGTTG
GATTGCTCACATGGACGACCGGAGACGGTTGGCAGAGCTTCCTGCTGGTA
GCGGGATTCTGGACGCTGGTTCTCTATGGCGACGTGATCGTTACTTGGAC
CGGGCCACTCCTTGTGGTCATTAGCCTTATTCTGGGCATGTACTGGAGAC
GCTACTCCCCGCTGTCATCGAGGGCTCACTTGAGTGAGAAGCAAGGCCAT
CAGAGGGCTGCTTCGGAGACATTTCCCCATCGGCATGAAACGTTGGACGA
AATAGTCGAGACGCTACGGACATTTACCACACGTTGCAATATTCTCCTGG
AGCCACTCGTTGAATTTACCGACTTCTTATCCACGCAGAGGACGGCGACT
TCTGCCACTACCCGACCAGCTCTGACGACATTATTCTTTCGAATCCTCTT
CGTGACTCCAATTTGGATCGCCTTGACTCTTCCGCCGTTGTATCTGATCA
CCACTCGCCGAGTCATCATGACACTTGGCACCATCATTCTCACCTATCAC
TCTCGCCCGGCAAGAGTATCTCGTGTCATTCTTTGGCGATCGTTAACAAT
CCGCCGGGTGTGCTCTATAATTACGGGGCTATCCTTCTCTTCTACTGTTG
ATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCCATGCAATGAGCATT
GCGACAAGACGTCGAGGAGACTCCTCCGGTGTACGATTTACCTTTGTCAT
CTATGAAAACCAACGTCGTTGGCTTGGGATCGGCTGGACGTACTCTCTGT
TCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATTTAAATCACGTCCCG
TCGAAGGAGGAATTCGAGTTACCCGGTGTCGCAAACGGCAATGCTCAGTG
GCGCTGGGTCGAAGGGAGTGACTGGCGTATTGAAGGGGCCGACGAGTCAG
GAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGGTCTACTATGACAAT
AAGTGGAATGACGGTCGTCGTGGCCAGGATGGTTGGGATCGATACACCCG
TCGTCGGAAGTGGTGTCGTGACGCCGAACTAGTTGAGATTCCATCAGCGG
GCGAGAGCACCTCAGTGGAGACTAAATCGGGGATCGCTCAATCATTGGAG
CAGGAAAAGGCAGCTAACGCCCACGAAAAAGAAATCTCATCTACGGTCGA
CGCCGACGCAGAAAGTCTCGCCCCGTCAACCTCATCCAAGTCCCGCAAAC
GACGTTGGTTTGGGAGTACGAAGAGTGTAAGCGACAAAGCCAGCAGCATC
TCCTCTGCTCCACCAACGTCCACGAATAACTCCTCCGTAGATCTCGGAAA
ATTAAAGTCCGCCACCCCTACCGGCAGCTACACGCCAACTGGGAAGTCCA
CCGCAACTGCAACCCGACCCATCAGTATTCCGCACGCCCGGAAGATGTCC
AATCACTCGGGAGGCAGCGCCAGTCACAGCAGCAGCTTCGGTCGTGAGGG
AAGTATCAGGGAGAAAGAGATGTCTCTTGCTCAGGATCGTCTGGACCGCT
GGGGCACTCGCGCCACGGGGGGTACTGAACGAGCCGAGCGAGAGATGGGG
CTAGGTGATGAGGTCAATATGGGATTGAGCTGAATGGCCCCATCATCATC
CACGCAGGACCATGCTGACTCTCAGCCTCCGACGGTCGCTGCTTTCTCCC
CCACCACCATCTCAGGCTCGTCCGTGACATCGAGACAGCGCTCCAGCATC
ATCGTGCATCGCAAATCGCCGCTACTGGTGGCCACGCCCCCTCAGATCAC
CCGGGCATTGGCCTACTCGCATCCGTTTATTCTCCCCTTGAACAAGCTCG
TTGGATTGCTCACATGGACGACCGGAGACGGTTGGCAGAGCTTCCTGCTG
GTAGCGGGATTCTGGACGCTGGTTCTCTATGGCGACGTGATCGTTACTTG
GACCGGGCCACTCCTTGTGGTCATTAGCCTTATTCTGGGCATGTACTGGA
GACGCTACTCCCCGCTGTCATCGAGGGCTCACTTGAGTGAGAAGCAAGGC
CATCAGAGGGCTGCTTCGGAGACATTTCCCCATCGGCATGAAACGTTGGA
CGAAATAGTCGAGACGCTACGGACATTTACCACACGTTGCAATATTCTCC
TGGAGCCACTCGTTGAATTTACCGACTTCTTATCCACGCAGAGGACGGCG
ACTTCTGCCACTACCCGACCAGCTCTGACGACATTATTCTTTCGAATCCT
CTTCGTGACTCCAATTTGGATCGCCTTGACTCTTCCGCCGTTGTATCTGA
TCACCACTCGCCGAGTCATCATGACACTTGGCACCATCATTCTCACCTAT
CACTCTCGCCCGGCAAGAGTATCTCGTGTCATTCTTTGGCGATCGTTAAC
AATCCGCCGGGTGTGCTCTATAATTACGGGGCTATCCTTCTCTTCTACTG
TTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCCATGCAATGAGC
ATTGCGACAAGACGTCGAGGAGACTCCTCCGGTGTACGATTTACCTTTGT
CATCTATGAAAACCAACGTCGTTGGCTTGGGATCGGCTGGACGTACTCTC
TGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATTTAAATCACGTC
CCGTCGAAGGAGGAATTCGAGTTACCCGGTGTCGCAAACGGCAATGCTCA
GTGGCGCTGGGTCGAAGGGAGTGACTGGCGTATTGAAGGGGCCGACGAGT
CAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGGTCTACTATGAC
AATAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001874KJC3_001874Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001874-T2KJC3_001874-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001874-T2.cdsKJC3_001874-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001874-T2.utr3p1KJC3_001874-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001874-T2.exon2KJC3_001874-T2.exon2Aspergillus niger KJC3exon
KJC3_001874-T2.exon1KJC3_001874-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001874-T2.utr5p1KJC3_001874-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010482
DBxrefInterPro:IPR006614
DBxrefPFAM:PF06398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:930897..933477 -
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