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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:930897..933477- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001874-T4 ID=KJC3_001874-T4|Name=KJC3_001874-T4|organism=Aspergillus niger KJC3|type=mRNA|length=2581bp|location=Sequence derived from alignment at ch2:930897..933477- (Aspergillus niger KJC3)
CGAAAAGCTTCAATTCTCAGCTGCACCCGCGGATCTCTGGCTATTCCCCC
CTTCCATCCCCGCAGATGATCGGCCTCCAGAGACCTTGTCTCTAACTTTT
GGTCCCCCATCTTTCGTTGGGCCCGACCAGCATTTATTGTGTGTCTCTCG
CCCTTTTCCTTCTCCTCTCTCTTCTCCGCGTCTCACCGCCCGCAATGACC
TTGGATGCATATGACGTCTCTGTTGTTGGATGGCAGCTCTCGGTAGGTGA
TACAAACAAATGCACTTTCTGACTCTGACAACTCTCCACTTCTTACATCC
TTCGAATACCTGGTCCACGTGGACGAGCCACTCTCATCCCACTACCGCCC
CGAATACTAATGTCGCGACAGAAGATATTCCGTGGATAGATTCCATGGCC
CCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCCGACGGTCGC
TGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGAGACAGC
GCTCCAGCATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCCACGCCC
CCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTATTCTCCCCTT
GAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTTGGCAGA
GCTTCCTGCTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGCGACGTG
ATCGTTACTTGGACCGGGCCACTCCTTGTGGTCATTAGCCTTATTCTGGG
CATGTACTGGAGACGCTACTCCCCGCTGTCATCGAGGGCTCACTTGAGTG
AGAAGCAAGGCCATCAGAGGGCTGCTTCGGAGACATTTCCCCATCGGCAT
GAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTACCACACGTTG
CAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTATCCACGC
AGAGGACGGCGACTTCTGCCACTACCCGACCAGCTCTGACGACATTATTC
TTTCGAATCCTCTTCGTGACTCCAATTTGGATCGCCTTGACTCTTCCGCC
GTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTTGGCACCATCA
TTCTCACCTATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATTCTTTGG
CGATCGTTAACAATCCGCCGGGTGTGCTCTATAATTACGGGGCTATCCTT
CTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCC
ATGCAATGAGCATTGCGACAAGACGTCGAGGAGACTCCTCCGGTGTACGA
TTTACCTTTGTCATCTATGAAAACCAACGTCGTTGGCTTGGGATCGGCTG
GACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATT
TAAATCACGTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTCGCAAAC
GGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCGTATTGAAGG
GGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGG
TCTACTATGACAATAAGGTGGGACACATTGTTTCCCATTTTCTGACAAAT
GTCCAGGTGCCAGGGTTACTAACAGCATGGGAACAGTGGAATGACGGTCG
TCGTGGCCAGGATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTC
GTGACGCCGAACTAGTTGAGATTCCATCAGCGGGCGAGAGCACCTCAGTG
GAGACTAAATCGGGGATCGCTCAATCATTGGAGCAGGAAAAGGCAGCTAA
CGCCCACGAAAAAGAAATCTCATCTACGGTCGACGCCGACGCAGAAAGTC
TCGCCCCGTCAACCTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGT
ACGAAGAGTGTAAGCGACAAAGCCAGCAGCATCTCCTCTGCTCCACCAAC
GTCCACGAATAACTCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCC
CTACCGGCAGCTACACGCCAACTGGGAAGTCCACCGCAACTGCAACCCGA
CCCATCAGTATTCCGCACGCCCGGAAGATGTCCAATCACTCGGGAGGCAG
CGCCAGTCACAGCAGCAGCTTCGGTCGTGAGGGAAGTATCAGGGAGAAAG
AGATGTCTCTTGCTCAGGATCGTCTGGACCGCTGGGGCACTCGCGCCACG
GGGGGTACTGAACGAGCCGAGCGAGAGATGGGGCTAGGTGATGAGGTCAA
TATGGGATTGAGCTGAGCTACTGAGTCATGGAGCAGGAGGTGAAGCACAC
TGCGACTGGTGGCATCTCAAGAGAATGGCATTTTTTTTATTCAGAGCGGA
CTTGTTATTAATGATTTCGGGCTTTTATTTTGCGTCAGGCGGACGGGTGT
TTTGGGTACTTCCTTTCTTAGCTTATATTCTTATTCTGTGCAGTTTAACG
CCTTGACGAAACGGAGATACCCTTGTTTACCCAAGAGAAGATCGAACTTG
AAGGCTAAATGCTCGGAATAGTGTGCGGTAGTTGACGATTTCTAAGACTG
GTAACAGTAGTACCCGAAGTGTATTTCGGTG back to topCoding sequence (CDS) from alignment at ch2:930897..933477- >KJC3_001874-T4 ID=KJC3_001874-T4|Name=KJC3_001874-T4|organism=Aspergillus niger KJC3|type=CDS|length=4383bp|location=Sequence derived from alignment at ch2:930897..933477- (Aspergillus niger KJC3)
ATCTCGGAAAATTAATGGAATGACGGTCGTCGTGGCCAGGATGGTTGGGA
TCGATACACCCGTCGTCGGAAGTGGTGTCGTGACGCCGAACTAGTTGAGA
TTCCATCAGCGGGCGAGAGCACCTCAGTGGAGACTAAATCGGGGATCGCT
CAATCATTGGAGCAGGAAAAGGCAGCTAACGCCCACGAAAAAGAAATCTC
ATCTACGGTCGACGCCGACGCAGAAAGTCTCGCCCCGTCAACCTCATCCA
AGTCCCGCAAACGACGTTGGTTTGGGAGTACGAAGAGTATGGCCCCATCA
TCATCCACGCAGGACCATGCTGACTCTCAGCCTCCGACGGTCGCTGCTTT
CTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGAGACAGCGCTCCA
GCATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCCACGCCCCCTCAG
ATCACCCGGGCATTGGCCTACTCGCATCCGTTTATTCTCCCCTTGAACAA
GCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTTGGCAGAGCTTCC
TGCTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGCGACGTGATCGTT
ACTTGGACCGGGCCACTCCTTGTGGTCATTAGCCTTATTCTGGGCATGTA
CTGGAGACGCTACTCCCCGCTGTCATCGAGGGCTCACTTGAGTGAGAAGC
AAGGCCATCAGAGGGCTGCTTCGGAGACATTTCCCCATCGGCATGAAACG
TTGGACGAAATAGTCGAGACGCTACGGACATTTACCACACGTTGCAATAT
TCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTATCCACGCAGAGGA
CGGCGACTTCTGCCACTACCCGACCAGCTCTGACGACATTATTCTTTCGA
ATCCTCTTCGTGACTCCAATTTGGATCGCCTTGACTCTTCCGCCGTTGTA
TCTGATCACCACTCGCCGAGTCATCATGACACTTGGCACCATCATTCTCA
CCTATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATTCTTTGGCGATCG
TTAACAATCCGCCGGGTGTGCTCTATAATTACGGGGCTATCCTTCTCTTC
TACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCCATGCAA
TGAGCATTGCGACAAGACGTCGAGGAGACTCCTCCGGTGTACGATTTACC
TTTGTCATCTATGAAAACCAACGTCGTTGGCTTGGGATCGGCTGGACGTA
CTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATTTAAATC
ACGTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTCGCAAACGGCAAT
GCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCGTATTGAAGGGGCCGA
CGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGGTCTACT
ATGACAATAAGATCTCGGAAAATTAATGGAATGACGGTCGTCGTGGCCAG
GATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGTGACGCCGA
ACTAGTTGAGATTCCATCAGCGGGCGAGAGCACCTCAGTGGAGACTAAAT
CGGGGATCGCTCAATCATTGGAGCAGGAAAAGGCAGCTAACGCCCACGAA
AAAGAAATCTCATCTACGGTCGACGCCGACGCAGAAAGTCTCGCCCCGTC
AACCTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGTACGAAGAGTA
TGGCCCCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCCGACG
GTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGAG
ACAGCGCTCCAGCATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCCA
CGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTATTCTC
CCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTTG
GCAGAGCTTCCTGCTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGCG
ACGTGATCGTTACTTGGACCGGGCCACTCCTTGTGGTCATTAGCCTTATT
CTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCATCGAGGGCTCACTT
GAGTGAGAAGCAAGGCCATCAGAGGGCTGCTTCGGAGACATTTCCCCATC
GGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTACCACA
CGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTATC
CACGCAGAGGACGGCGACTTCTGCCACTACCCGACCAGCTCTGACGACAT
TATTCTTTCGAATCCTCTTCGTGACTCCAATTTGGATCGCCTTGACTCTT
CCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTTGGCAC
CATCATTCTCACCTATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATTC
TTTGGCGATCGTTAACAATCCGCCGGGTGTGCTCTATAATTACGGGGCTA
TCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCA
GGGCCATGCAATGAGCATTGCGACAAGACGTCGAGGAGACTCCTCCGGTG
TACGATTTACCTTTGTCATCTATGAAAACCAACGTCGTTGGCTTGGGATC
GGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGA
GCATTTAAATCACGTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTCG
CAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCGTATT
GAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGG
CTGGGTCTACTATGACAATAAGATCTCGGAAAATTAATGGAATGACGGTC
GTCGTGGCCAGGATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGT
CGTGACGCCGAACTAGTTGAGATTCCATCAGCGGGCGAGAGCACCTCAGT
GGAGACTAAATCGGGGATCGCTCAATCATTGGAGCAGGAAAAGGCAGCTA
ACGCCCACGAAAAAGAAATCTCATCTACGGTCGACGCCGACGCAGAAAGT
CTCGCCCCGTCAACCTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAG
TACGAAGAGTATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCTC
AGCCTCCGACGGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCC
GTGACATCGAGACAGCGCTCCAGCATCATCGTGCATCGCAAATCGCCGCT
ACTGGTGGCCACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCATC
CGTTTATTCTCCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACC
GGAGACGGTTGGCAGAGCTTCCTGCTGGTAGCGGGATTCTGGACGCTGGT
TCTCTATGGCGACGTGATCGTTACTTGGACCGGGCCACTCCTTGTGGTCA
TTAGCCTTATTCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCATCG
AGGGCTCACTTGAGTGAGAAGCAAGGCCATCAGAGGGCTGCTTCGGAGAC
ATTTCCCCATCGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGGA
CATTTACCACACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACC
GACTTCTTATCCACGCAGAGGACGGCGACTTCTGCCACTACCCGACCAGC
TCTGACGACATTATTCTTTCGAATCCTCTTCGTGACTCCAATTTGGATCG
CCTTGACTCTTCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATG
ACACTTGGCACCATCATTCTCACCTATCACTCTCGCCCGGCAAGAGTATC
TCGTGTCATTCTTTGGCGATCGTTAACAATCCGCCGGGTGTGCTCTATAA
TTACGGGGCTATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTA
ATGCAGAGCCAGGGCCATGCAATGAGCATTGCGACAAGACGTCGAGGAGA
CTCCTCCGGTGTACGATTTACCTTTGTCATCTATGAAAACCAACGTCGTT
GGCTTGGGATCGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCT
TGGACAGACGAGCATTTAAATCACGTCCCGTCGAAGGAGGAATTCGAGTT
ACCCGGTGTCGCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTG
ACTGGCGTATTGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCC
GATGGCGGAGGCTGGGTCTACTATGACAATAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001874-T4.utr3p1 | KJC3_001874-T4.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010482 |
| DBxref | InterPro:IPR006614 |
| DBxref | PFAM:PF06398 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:930897..933477 - |
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