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KJC3_001884-T1, KJC3_001884-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001884-T1
Unique NameKJC3_001884-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:954869..956476+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001884-T1 ID=KJC3_001884-T1|Name=KJC3_001884-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1608bp|location=Sequence derived from alignment at ch2:954869..956476+ (Aspergillus niger KJC3)
CGTGGAATCATGAGCTATTAATGTAAGATGACTCTAAACTCAGTAGGCTT
AGTAGTCCGTATAGAAGCTAGCCCTTCCCTGCAACTGATGCCGTCTCCGA
CCAAAAATACACGCCAGCTTACTCTCAGACAAACAATGACGGTCTACTCT
GCGAGCAGAAGTATATCCACCGAAGCCATCTGGCACAGCCTGATACTGTC
TTCCCATCCACCGGAGAGCCATCGAACTAACACTACATACTCTGTTCAGA
GTAGCAGCCATGTGCATGACGTCACGGAGATCTAGGCTTCAACCTTCAAC
ATATTCCTCCGTGGGGATTCAATCTCTCTTGTATTGGTAGCTCAGTTCCC
ACTGGATGCGATCCAAATTGTGCTATTCAAATGTCACCTGCAAAAAGTGG
GTTCGCCCTCGTGACCCCGGCTTCGAAAGGACTGGGATTCGCCTTTGCGC
GACAGCTGCTGTCCAACACGGACCTCCCCGTCCTTGCGACTGCGCGGAGA
GATACCGCACAACTCCGTAAAAGCTTACTGAAGCAACTCAATGATGGAAC
TGGAAAGGCGGAGGAGCGGCTCAGAGTCTTTGAAGTTGACGTGACTGGTA
CTGAGTAGCATCATCCCCTCATGCCTTCTGGTCCTGAACAATGTTTTAGA
TGAGGCGACCATACACGCCATGGCCGCACAGATACGAGAAGAGATTCCAC
AGGCTTCCCTGCGTATTGCAATCACCGTACCTGGCGTTCTGCACGTGGAG
AAGTCTCCGACACAGATCGATGCGGCCAACGCTCTGCACAGTTTCCAAGT
CAATGCTCTTGGTCCTATGCTTCTGATGAAGCACTTGGCACCCTTTTTGC
CAACAAAGACATCGGCAACCTTTGCGGATGATTCTCCATCTGCACATGTA
CAACGCCCGTGGAAGCTTCCATCGCATGCTATCTACGCGATGATGGCCGC
GCGAGTTGGGTCCATATCGGACAATGCAACAGGGGGCTGGTATTCATACC
GTGCTAGCAAAGCCTCCGTCTTTCAGCTGACCAAAACTTTCGATCTGTAT
TTGCGGTCACGGAGCAGAGACCGAGCCTTTGCGGTGGCGCTGCATCCCGG
GACAGTCCAGACTGATTTCACGAAAGATTACTGGGATGGCAGACACATGC
TGCAGCCAGAAGAATCCGCAGTGAAGCTATTACAGCACCTATGTGGTATG
CAGACCGGTGACTCCGATGGGCGGGGCCGCTGTTGGGATTGGAAAGGCGA
GGAGGTTCTACCTTGAAGGATGTGGATGGTAAAATAGGAAATGCATGCTT
TGAGTTTTGCATCGGACCGATTTCCTTGACGCTGGTGATTCCAATTGTTT
CTCTTTCCAAGTTCGTAAGTGGAGTTCTGGTGAGAGAGGTTTATGGGAGA
ATGGTTTGAAACGGGCATAATAATTCTTGAGAGTTGGTAAGTGCTGAAAC
CATACCAGATACAGGTTTTGATACGAGCCTCTTAGCTGATTTTCCGCCAC
AGCAATTCTGGAGACAGTGGGCCACGGAAAGCACCTTAATCATCTTAGTG
TGTATTTTGGTTTTTAAGGCAGCGACAGCAAGCTGCATGCAGGAAAGCCA
GTAAGGGG
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Coding sequence (CDS) from alignment at ch2:954869..956476+

>KJC3_001884-T1 ID=KJC3_001884-T1|Name=KJC3_001884-T1|organism=Aspergillus niger KJC3|type=CDS|length=1668bp|location=Sequence derived from alignment at ch2:954869..956476+ (Aspergillus niger KJC3)
ATGTCACCTGCAAAAAGTGGGTTCGCCCTCGTGACCCCGGCTTCGAAAGG
ACTGGGATTCGCCTTTGCGCGACAGCTGCTGTCCAACACGGACCTCCCCG
TCCTTGCGACTGCGCGGAGAGATACCGCACAACTCCGTAAAAGCTTACTG
AAGCAACTCAATGATGGAACTGGAAAGGCGGAGGAGCGGCTCAGAGTCTT
TGAAGTTGACGTGACTGATGAGGCGACCATACACGCCATGGCCGCACAGA
TACGAGAAGAGATTCCACAGGCTTCCCTGCGTATTGCAATCACCGTACCT
GGCGTTCTGCACGTGGAGAAGTCTCCGACACAGATCGATGCGGCCAACGC
TCTGCACAGTTTCCAAGTCAATGCTCTTGGTCCTATGCTTCTGATGAAGC
ACTTGGCACCCTTTTTGCCAACAAAGACATCGGCAACCTTTGCGGATGAT
TCTCCATCTGCACATGTACAACGCCCGTGGAAGCTTCCATCGCATGCTAT
CTACGCGATGATGGCCGCGCGAGTTGGGTCCATATCGGACAATGCAACAG
GGGGCTGGTATTCATACCGTGCTAGCAAAGCCTCCGTCTTTCAGCTGACC
AAAACTTTCGATCTGTATTTGCGGTCACGGAGCAGAGACCGAGCCTTTGC
GGTGGCGCTGCATCCCGGGACAGTCCAGACTGATTTCACGAAAGATTACT
GGGATGGCAGACACATGCTGCAGCCAGAAGAATCCGCAGTGAAGCTATTA
CAGCACCTATGTGGTATGCAGACCGGTGACTCCGATGGGCGGGGCCGCTG
TTGGGATTGGAAAGGCGAGGAGGTTCTACCTTGAATGTCACCTGCAAAAA
GTGGGTTCGCCCTCGTGACCCCGGCTTCGAAAGGACTGGGATTCGCCTTT
GCGCGACAGCTGCTGTCCAACACGGACCTCCCCGTCCTTGCGACTGCGCG
GAGAGATACCGCACAACTCCGTAAAAGCTTACTGAAGCAACTCAATGATG
GAACTGGAAAGGCGGAGGAGCGGCTCAGAGTCTTTGAAGTTGACGTGACT
GATGAGGCGACCATACACGCCATGGCCGCACAGATACGAGAAGAGATTCC
ACAGGCTTCCCTGCGTATTGCAATCACCGTACCTGGCGTTCTGCACGTGG
AGAAGTCTCCGACACAGATCGATGCGGCCAACGCTCTGCACAGTTTCCAA
GTCAATGCTCTTGGTCCTATGCTTCTGATGAAGCACTTGGCACCCTTTTT
GCCAACAAAGACATCGGCAACCTTTGCGGATGATTCTCCATCTGCACATG
TACAACGCCCGTGGAAGCTTCCATCGCATGCTATCTACGCGATGATGGCC
GCGCGAGTTGGGTCCATATCGGACAATGCAACAGGGGGCTGGTATTCATA
CCGTGCTAGCAAAGCCTCCGTCTTTCAGCTGACCAAAACTTTCGATCTGT
ATTTGCGGTCACGGAGCAGAGACCGAGCCTTTGCGGTGGCGCTGCATCCC
GGGACAGTCCAGACTGATTTCACGAAAGATTACTGGGATGGCAGACACAT
GCTGCAGCCAGAAGAATCCGCAGTGAAGCTATTACAGCACCTATGTGGTA
TGCAGACCGGTGACTCCGATGGGCGGGGCCGCTGTTGGGATTGGAAAGGC
GAGGAGGTTCTACCTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001884KJC3_001884Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001884-T1.utr5p1KJC3_001884-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001884-T1.exon1KJC3_001884-T1.exon1Aspergillus niger KJC3exon
KJC3_001884-T1.exon2KJC3_001884-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001884-T1.cdsKJC3_001884-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001884-T1.utr3p1KJC3_001884-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001884-T1KJC3_001884-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:954869..956476 +
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