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KJC3_001887-T1, KJC3_001887-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001887-T1
Unique NameKJC3_001887-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:962179..963320+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001887-T1 ID=KJC3_001887-T1|Name=KJC3_001887-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1142bp|location=Sequence derived from alignment at ch2:962179..963320+ (Aspergillus niger KJC3)
ATGGACTACAACGCAGCAGACTTGAGCTCTGTCCTCAGAACTCTCTCCGC
CTTATCCAACCAGCAACAACCACAACCACAACCACAACTACAACTACAAT
CACAATCACACCCTCCTTACTCCCACAGCCCAGAGCCAGCACCAACAGAA
GACAATGATCCTTACGAACCCACCGAATCCCTCCCCCAGCTCCCCATACC
CCCGAAACCCATCTCACGACCCCAACACCACCACCACCAACAACAACAAC
ACCCCTCCCTAGCACCACAACCACAACCACAACCACGACCAGCACCAACC
CCAGCCCCAGCAGGATCCATCGCAGAAGACACCTCCAGCATAACCAGCTG
GCCCAGCGCCCTCCGCTACGTGATGCGCACGGTCGCCCAAAACGAAGACA
TCCAACGACGCATCCGCTGGCTAATCCAACGACAACACGACCACGAGAAA
CAATGGTGGCAGGGACGAGAAGCGCTCTTGAAGAAACAATCCGCCCGGAC
GGAGAAGAAGAAGGAGCTGGATGCTGTATTGTGAGTCTTGCATTACCCTG
TTTACTTCCCGTCCTCAACCTACAGAGAACAAGAAAAGCAGCCAGGAAAG
AGATAGAGGAGTTATGTTAATCACTTATGGAATTATGATAATTAGACGAT
CCGTCGGCGCTCCCGTTGATGAGAATAAGCAAGTTTCTGTATGTATTCCC
ATGCATGCATACCATACGGATATACAGATACAAAAGAAGAAGAACAAAAC
ACGAAGAATATCCATCATGGTGCTGGTGATGATTAGCAATCCTTACCACC
ATAGAAAATCGAAACAAAAACGTTACCCCCAGAAGCCTACACAGCTAATG
ATTGATGATGAAACAGACAGCCGAAGAAGACCGCGCCGAGTTAACCAACT
ACGACGCAAAAGTATACAAAGCCTCGCGACAAATGTCCGATGCTATGATA
GCGGAGCTCAAGGCACTTAGGATCCCCTTTTTCACTATTAAGAAGGGTCT
TGTTTCGGACTCTGACCCCTCGAACCCGGGACGAACAACAACGAACCCGG
CAGTCAAGCAGCAGCAACAGCTTTCCCGAGAGGAATTATCGGCGCTTCAA
TTGAGAATGCTGGAGTTGTTACAGGACCTTTGTCGGGAGTAA
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Coding sequence (CDS) from alignment at ch2:962179..963320+

>KJC3_001887-T1 ID=KJC3_001887-T1|Name=KJC3_001887-T1|organism=Aspergillus niger KJC3|type=CDS|length=2547bp|location=Sequence derived from alignment at ch2:962179..963320+ (Aspergillus niger KJC3)
ATGGACTACAACGCAGCAGACTTGAGCTCTGTCCTCAGAACTCTCTCCGC
CTTATCCAACCAGCAACAACCACAACCACAACCACAACTACAACTACAAT
CACAATCACACCCTCCTTACTCCCACAGCCCAGAGCCAGCACCAACAGAA
GACAATGATCCTTACGAACCCACCGAATCCCTCCCCCAGCTCCCCATACC
CCCGAAACCCATCTCACGACCCCAACACCACCACCACCAACAACAACAAC
ACCCCTCCCTAGCACCACAACCACAACCACAACCACGACCAGCACCAACC
CCAGCCCCAGCAGGATCCATCGCAGAAGACACCTCCAGCATAACCAGCTG
GCCCAGCGCCCTCCGCTACGTGATGCGCACGGTCGCCCAAAACGAAGACA
TCCAACGACGCATCCGCTGGCTAATCCAACGACAACACGACCACGAGAAA
CAATGGTGGCAGGGACGAGAAGCGCTCTTGAAGAAACAATCCGCCCGGAC
GGAGAAGAAGAAGGAGCTGGATGCTGTATTACGATCCGTCGGCGCTCCCG
TTGATGAGAATAAGCAAGTTTCTACAGCCGAAGAAGACCGCGCCGAGTTA
ACCAACTACGACGCAAAAGTATACAAAGCCTCGCGACAAATGTCCGATGC
TATGATAGCGGAGCTCAAGGCACTTAGGATCCCCTTTTTCACTATTAAGA
AGGGTCTTGTTTCGGACTCTGACCCCTCGAACCCGGGACGAACAACAACG
AACCCGGCAGTCAAGCAGCAGCAACAGCTTTCCCGAGAGGAATTATCGGC
GCTTCAATTGAGAATGCTGGAGTTGTTACAGGACCTTTGTCGGGAGTAAA
TGGACTACAACGCAGCAGACTTGAGCTCTGTCCTCAGAACTCTCTCCGCC
TTATCCAACCAGCAACAACCACAACCACAACCACAACTACAACTACAATC
ACAATCACACCCTCCTTACTCCCACAGCCCAGAGCCAGCACCAACAGAAG
ACAATGATCCTTACGAACCCACCGAATCCCTCCCCCAGCTCCCCATACCC
CCGAAACCCATCTCACGACCCCAACACCACCACCACCAACAACAACAACA
CCCCTCCCTAGCACCACAACCACAACCACAACCACGACCAGCACCAACCC
CAGCCCCAGCAGGATCCATCGCAGAAGACACCTCCAGCATAACCAGCTGG
CCCAGCGCCCTCCGCTACGTGATGCGCACGGTCGCCCAAAACGAAGACAT
CCAACGACGCATCCGCTGGCTAATCCAACGACAACACGACCACGAGAAAC
AATGGTGGCAGGGACGAGAAGCGCTCTTGAAGAAACAATCCGCCCGGACG
GAGAAGAAGAAGGAGCTGGATGCTGTATTACGATCCGTCGGCGCTCCCGT
TGATGAGAATAAGCAAGTTTCTACAGCCGAAGAAGACCGCGCCGAGTTAA
CCAACTACGACGCAAAAGTATACAAAGCCTCGCGACAAATGTCCGATGCT
ATGATAGCGGAGCTCAAGGCACTTAGGATCCCCTTTTTCACTATTAAGAA
GGGTCTTGTTTCGGACTCTGACCCCTCGAACCCGGGACGAACAACAACGA
ACCCGGCAGTCAAGCAGCAGCAACAGCTTTCCCGAGAGGAATTATCGGCG
CTTCAATTGAGAATGCTGGAGTTGTTACAGGACCTTTGTCGGGAGTAAAT
GGACTACAACGCAGCAGACTTGAGCTCTGTCCTCAGAACTCTCTCCGCCT
TATCCAACCAGCAACAACCACAACCACAACCACAACTACAACTACAATCA
CAATCACACCCTCCTTACTCCCACAGCCCAGAGCCAGCACCAACAGAAGA
CAATGATCCTTACGAACCCACCGAATCCCTCCCCCAGCTCCCCATACCCC
CGAAACCCATCTCACGACCCCAACACCACCACCACCAACAACAACAACAC
CCCTCCCTAGCACCACAACCACAACCACAACCACGACCAGCACCAACCCC
AGCCCCAGCAGGATCCATCGCAGAAGACACCTCCAGCATAACCAGCTGGC
CCAGCGCCCTCCGCTACGTGATGCGCACGGTCGCCCAAAACGAAGACATC
CAACGACGCATCCGCTGGCTAATCCAACGACAACACGACCACGAGAAACA
ATGGTGGCAGGGACGAGAAGCGCTCTTGAAGAAACAATCCGCCCGGACGG
AGAAGAAGAAGGAGCTGGATGCTGTATTACGATCCGTCGGCGCTCCCGTT
GATGAGAATAAGCAAGTTTCTACAGCCGAAGAAGACCGCGCCGAGTTAAC
CAACTACGACGCAAAAGTATACAAAGCCTCGCGACAAATGTCCGATGCTA
TGATAGCGGAGCTCAAGGCACTTAGGATCCCCTTTTTCACTATTAAGAAG
GGTCTTGTTTCGGACTCTGACCCCTCGAACCCGGGACGAACAACAACGAA
CCCGGCAGTCAAGCAGCAGCAACAGCTTTCCCGAGAGGAATTATCGGCGC
TTCAATTGAGAATGCTGGAGTTGTTACAGGACCTTTGTCGGGAGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001887KJC3_001887Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001887-T1.exon1KJC3_001887-T1.exon1Aspergillus niger KJC3exon
KJC3_001887-T1.exon2KJC3_001887-T1.exon2Aspergillus niger KJC3exon
KJC3_001887-T1.exon3KJC3_001887-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001887-T1.cdsKJC3_001887-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001887-T1KJC3_001887-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018858
DBxrefPFAM:PF10454
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:962179..963320 +
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