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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:978191..979843- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001892-T1 ID=KJC3_001892-T1|Name=KJC3_001892-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1653bp|location=Sequence derived from alignment at ch2:978191..979843- (Aspergillus niger KJC3)
CCTCTCTCTCTCACTTATTCCCTGTTTTACTCCATGTGCAGTTTCTTTGC
TGCTATTGGTCGCTGTCTTGTGACGGTTCATCAAGGCTGTGGAATGATAG
GATACTATACGTTTACCTCTTGACAACTCTTGCCAATATTCATCACCTCA
ATCTACACATCTACAGCATCTCATCAAGTGAACAATCTCTAGCTGCCACA
CTCTCTCAAGTGAACAGTGACTCGCTGGCACTACTTATTTTACATTATTC
TTGCATTTCTAACAATCATATCCCTTTGTCTTCTGGCTACCCCATTCATC
CTAATATCCTCGGCATCTCATAGCTTCTTCCCTGCTCCGTGCAGTCTCCC
CCAATAAGATGTTTCATCCTCACCCCCATGCTCCAAGAAACAATCGTGCG
CATGCAAGAGCACCCAGAGCGCTCAGAGGTCACTTCCAAGCAGCTATGCA
TACACAGCCTCTTGTACATCCTCAGCCTTCGTCCCGAGGCCAACAGCACC
ATCCTTCGAATGTGGGTGATCTGTCCCAACGTACAATGCACATACTAACA
CACCTAGTCCCGTGGGAGACAGTCACATACCCACCGAGGGCAGAGAGGTC
ATCCTAGAGGACAAGTACAGACAGCCAACTTTCAGCCATCACAAGGAAAG
TCAACTAGTAACGGAGCTCCCGGCCGCAGTCGTTCCAACTACAGAGGAAG
CAGATCTAGGAAGAACTTCCCTACCAATTCTAGATATCCAGTCATTAAAC
AGCATGTAATAATGTCCACAGCTCCATGTTTCATTCTCCCGCGCCAATCT
CCCGGTTCGGCTGAAGAGAAGGCAGCAGCACAGATACCCTCAACGTTCCA
GCGACTCCCACCCGAGATTCGAAGCCAAATTTATGGTTACATATTTGAAC
CTCACCGTGTTGAGCTCATACGAAGACGCGAGAAAGACCCGGCGAAGCAC
CCAAAAAGAGTGTACTACCGCCTGTATCATAATCAGCTTCGATCGCGCCA
TCCCATCACACAGCAAATCCAGGACCCTTATTTGAAAGGCCAACACCCTG
TGCCTATTGGGCTGGCTTTTACATGCCGCAGTATTTACTGCGAAACCCTT
TGGTGGCTGTACTCAACTACCCAATTTGTCTTCACCTCGACGAAGACTAT
GAACCGCTTCTTTAACATCATCCCCTCTGAAGTACAGCCTACCATACGGC
ACGTAGAGATTAACCAAGAAATGCATAGTGAACCCAGCCTAACTGAGCAC
CGTATTCACAAGGTTCGAAGTGACTGGGCTTTCACAATGGCATGCGAGAA
CTTGGTCAAGTGCTGTTCAGGACTGCGAGTCCTGTACATCTACTTCCGCA
TCCGTGATTGGCCCATGAACCTCGAGATCGGCGAGACATGGTCATTGCCA
ATGATGGCCTTTGCGGAGTACAAAGGTGGCTTGGACATCGTGAACATCAA
CCTCGACATGCCGAGGTTTGGGCTACAGAAGTTGAAAAACATGGCCAAAA
CCCTCGAAAAGAGGTTCATGAAACCTAGGGCGTTCCAGGTCAGGGAAGAT
GAGCAAATGGCCAGGGAATTAAGCTGCTCTTTCATGGAATTGCAGGTATA
TGGAACTAACTGATATCCCTTTTTCATTCATGTTCCTGGTCCCTTTGATG
GAG back to topCoding sequence (CDS) from alignment at ch2:978191..979843- >KJC3_001892-T1 ID=KJC3_001892-T1|Name=KJC3_001892-T1|organism=Aspergillus niger KJC3|type=CDS|length=2418bp|location=Sequence derived from alignment at ch2:978191..979843- (Aspergillus niger KJC3)
TCCCGTGGGAGACAGTCACATACCCACCGAGGGCAGAGAGGTCATCCTAG
AGGACAAGTACAGACAGCCAACTTTCAGCCATCACAAGGAAAGTCAACTA
GTAACGGAGCTCCCGGCCGCAGTCGTTCCAACTACAGAGGAAGCAGATCT
AGGAAGAACTTCCCTACCAATTCTAGATATCCAGTCATTAAACAGCATGT
AATAATGTCCACAGCTCCATGTTTCATTCTCCCGCGCCAATCTCCCGGTT
CGGCTGAAGAGAAGGCAGCAGCACAGATACCCTCAACGTTCCAGCGACTC
CCACCCGAGATTCGAAGCCAAATTTATGGTTACATATTTGAACCTCACCG
TGTTGAGCTCATACGAAGACGCGAGAAAGACCCGGCGAAGCACCCAAAAA
GAGTGTACTACCGCCTGTATCATAATCAGCTTCGATCGCGCCATCCCATC
ACACAGCAAATCCAGGACCCTTATTTGAAAGGCCAACACCCTGTGCCTAT
TGGGCTGGCTTTTACATGCCGCAGTATTTACTGCGAAACCCTTTGGTGGC
TGTACTCAACTACCCAATTTGTCTTCACCTCGACGAAGACTATGAACCGC
TTCTTTAACATCATCCCCTCTGAAGTACAGCCTACCATACGGCACGTAGA
GATTAACCAAGAAATGCATAGTGAACCCAGCCTAACTGAGCACCGTATTC
ACAAGGTTCGAAGTGACTGGGCTTTCACAATGGCATGCGAGAACTTGGTC
AAGTGCTGTTCAGGACTGCGAGTCCTGTACATCTACTTCCGCATCCGTGA
TTGGCCCATGAACCTCGAGATCGGCGAGACATGGTCATTGCCAATGATGG
CCTTTGCGGAGTACAAAGGTGGCTTGGACATCGTGAACATCAACCTCGAC
ATGCCGAGGTTTGGGCTACAGAAGTTGAAAAACATGGCCAAAACCCTCGA
AAAGAGGTTCATGAAACCTAGGGCGTTCCAGGTCAGGGAAGATGAGCAAA
TGGCCAGGGAATTAAGCTGCTCTTTCATGGAATTGCAGGTATATGGAACT
AACTGAATGTTTCATCCTCACCCCCATGCTCCAAGAAACAATCGTGCGCA
TGCAAGAGCACCCAGAGCGCTCAGAGGTCACTTCCAAGCAGCTATGCATA
CACAGCCTCTTGTACATCCTCAGCCTTCGTCCCGAGGCCAACAGCACCAT
CCTTCGAATTCCCGTGGGAGACAGTCACATACCCACCGAGGGCAGAGAGG
TCATCCTAGAGGACAAGTACAGACAGCCAACTTTCAGCCATCACAAGGAA
AGTCAACTAGTAACGGAGCTCCCGGCCGCAGTCGTTCCAACTACAGAGGA
AGCAGATCTAGGAAGAACTTCCCTACCAATTCTAGATATCCAGTCATTAA
ACAGCATGTAATAATGTCCACAGCTCCATGTTTCATTCTCCCGCGCCAAT
CTCCCGGTTCGGCTGAAGAGAAGGCAGCAGCACAGATACCCTCAACGTTC
CAGCGACTCCCACCCGAGATTCGAAGCCAAATTTATGGTTACATATTTGA
ACCTCACCGTGTTGAGCTCATACGAAGACGCGAGAAAGACCCGGCGAAGC
ACCCAAAAAGAGTGTACTACCGCCTGTATCATAATCAGCTTCGATCGCGC
CATCCCATCACACAGCAAATCCAGGACCCTTATTTGAAAGGCCAACACCC
TGTGCCTATTGGGCTGGCTTTTACATGCCGCAGTATTTACTGCGAAACCC
TTTGGTGGCTGTACTCAACTACCCAATTTGTCTTCACCTCGACGAAGACT
ATGAACCGCTTCTTTAACATCATCCCCTCTGAAGTACAGCCTACCATACG
GCACGTAGAGATTAACCAAGAAATGCATAGTGAACCCAGCCTAACTGAGC
ACCGTATTCACAAGGTTCGAAGTGACTGGGCTTTCACAATGGCATGCGAG
AACTTGGTCAAGTGCTGTTCAGGACTGCGAGTCCTGTACATCTACTTCCG
CATCCGTGATTGGCCCATGAACCTCGAGATCGGCGAGACATGGTCATTGC
CAATGATGGCCTTTGCGGAGTACAAAGGTGGCTTGGACATCGTGAACATC
AACCTCGACATGCCGAGGTTTGGGCTACAGAAGTTGAAAAACATGGCCAA
AACCCTCGAAAAGAGGTTCATGAAACCTAGGGCGTTCCAGGTCAGGGAAG
ATGAGCAAATGGCCAGGGAATTAAGCTGCTCTTTCATGGAATTGCAGGTA
TATGGAACTAACTGAATGTTTCATCCTCACCCCCATGCTCCAAGAAACAA
TCGTGCGCATGCAAGAGCACCCAGAGCGCTCAGAGGTCACTTCCAAGCAG
CTATGCATACACAGCCTCTTGTACATCCTCAGCCTTCGTCCCGAGGCCAA
CAGCACCATCCTTCGAAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001892-T1.utr3p1 | KJC3_001892-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001892-T1.utr5p1 | KJC3_001892-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:978191..979843 - |
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