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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:986434..987745+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001896-T1 ID=KJC3_001896-T1|Name=KJC3_001896-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1312bp|location=Sequence derived from alignment at ch2:986434..987745+ (Aspergillus niger KJC3)
CTTACTTACTCTGAAACATCATATCATCCATCTCAATTCGACACCTCACA
CAACCATACCACCTCCTATCCCCAACTCTCACAACAAACATACAACATAC
TACCGACTTGTAAATATGTCCTCTTCAATCCTCGATACCCCCGACCCTGC
CTCCTTATCCCCTTTCCTCAACGCCTCCTCCCCATCCCTCCGATCTCTCC
TCCACCACCCAGACTACCTCCCCATCCGCACATACTCGCGCATCCCTAAA
CCCTCCACCGGCGAGGATGGCTACTTCGCAAACACCCTAGCCACCTCCCG
CACCATCCCCCACGTCCTGACGCTCCGTCGACGTCCGCACCTCCTCTCCC
TCCTCCCCAACTCCCCGCCCACCTGGCCCGCTCCCACCGGCTCTCCGACT
CCAATTGAAGACCCCGACTTGATCCTCATCCTCGACATCGCTGCCCCCGG
TGTCTCGGGACATCCGTCCACTGCTCATGGCGGAGTCCTGGCTACGTCCC
TGGATGAAGCCATGTCCTATGCCGTGGCACTGTATGCGCCGGAGACGGGC
CCGAAGCTGGTAGAGGATGAGCAACCGGATGGCCCGCATGTCCCGCCTAC
GCCGCGCGGAATGCTCTATACTGCCCAACTAGACATCCGCTACAAGAGTC
CGGTTGCTGCGCCGGGGTATCTAGTTGTTCGGACTAAGGTCCTCGCTCGT
GTGGGTCGCAAGTTCTGGGTGCGCGCGCAGGCCTTTCAGCCGCAGGATAC
AGAAGGTGCCGTTACCTCCCCCCAGGCGGAGGGAGAGCCAATGCGTCTTA
CCACGGATGCGATGGCGTTTTGGATGCAGACGGGACCATCGCTCTAATTT
CCTTCTTTTTCTTTTTCTTCTGTGTGTTCTATAGATCTAGATTCTATTAC
CCGTGTATATAGTCTATGTACATATTGCATCGACCGGTAGATAGAGCCAG
TCGTTCGGAGAAAGAGACAAGAAGAGAAGAGGAACAGGGTCGAGAACGAT
TATGAGACAGAAAGAAAAGGGAGGAAGAAAGAAAGAAAGAAACAAAGAAA
GAGAGGTATCTACAACTTCGCACGAGACCCGATATTGCGACTGGCACTCA
ACACCAAACCCACCTGCGTACTCAGCGCCACCACGTCCCCCTTATCATCC
ACAACCGTCACATCCAAATCCGTCCGTCCATCCCGCACCTTCTTCGTATA
CACCCGACTATACAACCACTCCACCCCTTCCTCCGGCAACCTCGTCTTCA
GATCAATATTCAACGTGACCGTGGGAAACCAAAACAACCCCTTCCCACCC
CCCACCGCCGCC back to topCoding sequence (CDS) from alignment at ch2:986434..987745+ >KJC3_001896-T1 ID=KJC3_001896-T1|Name=KJC3_001896-T1|organism=Aspergillus niger KJC3|type=CDS|length=732bp|location=Sequence derived from alignment at ch2:986434..987745+ (Aspergillus niger KJC3)
ATGTCCTCTTCAATCCTCGATACCCCCGACCCTGCCTCCTTATCCCCTTT
CCTCAACGCCTCCTCCCCATCCCTCCGATCTCTCCTCCACCACCCAGACT
ACCTCCCCATCCGCACATACTCGCGCATCCCTAAACCCTCCACCGGCGAG
GATGGCTACTTCGCAAACACCCTAGCCACCTCCCGCACCATCCCCCACGT
CCTGACGCTCCGTCGACGTCCGCACCTCCTCTCCCTCCTCCCCAACTCCC
CGCCCACCTGGCCCGCTCCCACCGGCTCTCCGACTCCAATTGAAGACCCC
GACTTGATCCTCATCCTCGACATCGCTGCCCCCGGTGTCTCGGGACATCC
GTCCACTGCTCATGGCGGAGTCCTGGCTACGTCCCTGGATGAAGCCATGT
CCTATGCCGTGGCACTGTATGCGCCGGAGACGGGCCCGAAGCTGGTAGAG
GATGAGCAACCGGATGGCCCGCATGTCCCGCCTACGCCGCGCGGAATGCT
CTATACTGCCCAACTAGACATCCGCTACAAGAGTCCGGTTGCTGCGCCGG
GGTATCTAGTTGTTCGGACTAAGGTCCTCGCTCGTGTGGGTCGCAAGTTC
TGGGTGCGCGCGCAGGCCTTTCAGCCGCAGGATACAGAAGGTGCCGTTAC
CTCCCCCCAGGCGGAGGGAGAGCCAATGCGTCTTACCACGGATGCGATGG
CGTTTTGGATGCAGACGGGACCATCGCTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001896-T1.utr5p1 | KJC3_001896-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001896-T1.utr3p1 | KJC3_001896-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029069 |
| DBxref | InterPro:IPR006683 |
| DBxref | PFAM:PF03061 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:986434..987745 + |
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