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KJC3_001897-T1, KJC3_001897-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001897-T1
Unique NameKJC3_001897-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:986434..988793-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001897-T1 ID=KJC3_001897-T1|Name=KJC3_001897-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2360bp|location=Sequence derived from alignment at ch2:986434..988793- (Aspergillus niger KJC3)
GACAAAACTGATAACTTGCTTTTCTTCTCTCAACTGCTGGTCTCTCCTTT
TCTTCCATGGATAGAATATACTGACCAAAGACTTTCTCTATCGTTTCCAC
TTAAATACACCACACCATCCTCCTTCAAACATCAAGAACTGACCTACTAC
CTCACTGACCGACAATGTCTCCCCCTCATCCACCACCACCTCCAGCGCAC
GGCTCGGCCTTCGAGTCCGCCATCAAAGTGACCCCCCTCAGCTCGCACCG
CTACTCTGCCCATCTCCGCGACGAATGGTGCATCGGAGCAGGTAGGATAC
TTATATACCTTTCCCCACTACATATTGCATACTCACTGTTTATTACAGTC
CCCCATGGTGGCTACACCACCTCCATCCTCTACCGCCTCGCCCTCGTGCA
CTTCGCGCACACCCACCCAGCTCTTTACAAGAACAGCCCCGCGACCCCGA
TCGCCATGCAACTGTCCTTCCTCCGCCGCACAGCGACAGGTCCCGCCGTG
CTGAAAGTCCAGGATACGAAGCTGGGACGGCGGACGAGTACGCTGCATGT
TATGTTGTTACAGAAGCCGGATAGCGGCAAAAGGAAGCAATCACAGTCGT
CTACTACTACTACGACTACCGGCACCGAAGCAGAAGACGAGGACTTGGAA
GTCAAAGTAGCAGGATACATTACCGTCAGTCCTGCGGACGCCGAAGAGGG
ACTGAGTGCTACGACAGGGTGGAAGATCAGCAGTCCTGCGCCGGCGGCCG
GGTCCAATGGAGATGGATCGGTGAACTTGGGAGCGTTAGGGAGGACAGGG
CGTGATGGGGCGTGGGGGAAGTTCGAACCGGAGCATTCGAAGTTCCGGAA
GGCGACGGGGCAGACAGAATTCTATGTACCTGTTGAGCTTAGTGAGAAGG
AGAGGAAGGAAAGGAAGATGAATGCGGAGCAATGGGCGAGGTTCCGGCCT
GGAGGGGATGTGAATGCCCGGTGGACCAACGAGGCGCTGGTGTATTTGAC
GGATATGTTTCCTACGGCGTTGGCTGGGTTTGATGATGCGGCGGAGGAGG
CGGCGGTGGGGGGTGGGAAGGGGTTGTTTTGGTTTCCCACGGTCACGTTG
AATATTGATCTGAAGACGAGGTTGCCGGAGGAAGGGGTGGAGTGGTTGTA
TAGTCGGGTGTATACGAAGAAGGTGCGGGATGGACGGACGGATTTGGATG
TGACGGTTGTGGATGATAAGGGGGACGTGGTGGCGCTGAGTACGCAGGTG
GGTTTGGTGTTGAGTGCCAGTCGCAATATCGGGTCTCGTGCGAAGTTGTA
GATACCTCTCTTTCTTTGTTTCTTTCTTTCTTTCTTCCTCCCTTTTCTTT
CTGTCTCATAATCGTTCTCGACCCTGTTCCTCTTCTCTTCTTGTCTCTTT
CTCCGAACGACTGGCTCTATCTACCGGTCGATGCAATATGTACATAGACT
ATATACACGGGTAATAGAATCTAGATCTATAGAACACACAGAAGAAAAAG
AAAAAGAAGGAAATTAGAGCGATGGTCCCGTCTGCATCCAAAACGCCATC
GCATCCGTGGTAAGACGCATTGGCTCTCCCTCCGCCTGGGGGGAGGTAAC
GGCACCTTCTGTATCCTGCGGCTGAAAGGCCTGCGCGCGCACCCAGAACT
TGCGACCCACACGAGCGAGGACCTTAGTCCGAACAACTAGATACCCCGGC
GCAGCAACCGGACTCTTGTAGCGGATGTCTAGTTGGGCAGTATAGAGCAT
TCCGCGCGGCGTAGGCGGGACATGCGGGCCATCCGGTTGCTCATCCTCTA
CCAGCTTCGGGCCCGTCTCCGGCGCATACAGTGCCACGGCATAGGACATG
GCTTCATCCAGGGACGTAGCCAGGACTCCGCCATGAGCAGTGGACGGATG
TCCCGAGACACCGGGGGCAGCGATGTCGAGGATGAGGATCAAGTCGGGGT
CTTCAATTGGAGTCGGAGAGCCGGTGGGAGCGGGCCAGGTGGGCGGGGAG
TTGGGGAGGAGGGAGAGGAGGTGCGGACGTCGACGGAGCGTCAGGACGTG
GGGGATGGTGCGGGAGGTGGCTAGGGTGTTTGCGAAGTAGCCATCCTCGC
CGGTGGAGGGTTTAGGGATGCGCGAGTATGTGCGGATGGGGAGGTAGTCT
GGGTGGTGGAGGAGAGATCGGAGGGATGGGGAGGAGGCGTTGAGGAAAGG
GGATAAGGAGGCAGGGTCGGGGGTATCGAGGATTGAAGAGGACATATTTA
CAAGTCGGTAGTATGTTGTATGTTTGTTGTGAGAGTTGGGGATAGGAGGT
GGTATGGTTGTGTGAGGTGTCGAATTGAGATGGATGATATGATGTTTCAG
AGTAAGTAAG
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Coding sequence (CDS) from alignment at ch2:986434..988793-

>KJC3_001897-T1 ID=KJC3_001897-T1|Name=KJC3_001897-T1|organism=Aspergillus niger KJC3|type=CDS|length=2160bp|location=Sequence derived from alignment at ch2:986434..988793- (Aspergillus niger KJC3)
TCCCCCATGGTGGCTACACCACCTCCATCCTCTACCGCCTCGCCCTCGTG
CACTTCGCGCACACCCACCCAGCTCTTTACAAGAACAGCCCCGCGACCCC
GATCGCCATGCAACTGTCCTTCCTCCGCCGCACAGCGACAGGTCCCGCCG
TGCTGAAAGTCCAGGATACGAAGCTGGGACGGCGGACGAGTACGCTGCAT
GTTATGTTGTTACAGAAGCCGGATAGCGGCAAAAGGAAGCAATCACAGTC
GTCTACTACTACTACGACTACCGGCACCGAAGCAGAAGACGAGGACTTGG
AAGTCAAAGTAGCAGGATACATTACCGTCAGTCCTGCGGACGCCGAAGAG
GGACTGAGTGCTACGACAGGGTGGAAGATCAGCAGTCCTGCGCCGGCGGC
CGGGTCCAATGGAGATGGATCGGTGAACTTGGGAGCGTTAGGGAGGACAG
GGCGTGATGGGGCGTGGGGGAAGTTCGAACCGGAGCATTCGAAGTTCCGG
AAGGCGACGGGGCAGACAGAATTCTATGTACCTGTTGAGCTTAGTGAGAA
GGAGAGGAAGGAAAGGAAGATGAATGCGGAGCAATGGGCGAGGTTCCGGC
CTGGAGGGGATGTGAATGCCCGGTGGACCAACGAGGCGCTGGTGTATTTG
ACGGATATGTTTCCTACGGCGTTGGCTGGGTTTGATGATGCGGCGGAGGA
GGCGGCGGTGGGGGGTGGGAAGGGGTTGTTTTGGTTTCCCACGGTCACGT
TGAATATTGATCTGAAGACGAGGTTGCCGGAGGAAGGGGTGGAGTGGTTG
TATAGTCGGGTGTATACGAAGAAGGTGCGGGATGGACGGACGGATTTGGA
TGTGACGGTTGTGGATGATAAGGGGGACGTGGTGGCGCTGAGTACGCAGG
TGGGTTTGGTGTTGAGTGCCAGTCGCAATATCGGGTCTCGTGCGAAGTTG
TAGATGTCTCCCCCTCATCCACCACCACCTCCAGCGCACGGCTCGGCCTT
CGAGTCCGCCATCAAAGTGACCCCCCTCAGCTCGCACCGCTACTCTGCCC
ATCTCCGCGACGAATGGTGCATCGGAGCAGTCCCCCATGGTGGCTACACC
ACCTCCATCCTCTACCGCCTCGCCCTCGTGCACTTCGCGCACACCCACCC
AGCTCTTTACAAGAACAGCCCCGCGACCCCGATCGCCATGCAACTGTCCT
TCCTCCGCCGCACAGCGACAGGTCCCGCCGTGCTGAAAGTCCAGGATACG
AAGCTGGGACGGCGGACGAGTACGCTGCATGTTATGTTGTTACAGAAGCC
GGATAGCGGCAAAAGGAAGCAATCACAGTCGTCTACTACTACTACGACTA
CCGGCACCGAAGCAGAAGACGAGGACTTGGAAGTCAAAGTAGCAGGATAC
ATTACCGTCAGTCCTGCGGACGCCGAAGAGGGACTGAGTGCTACGACAGG
GTGGAAGATCAGCAGTCCTGCGCCGGCGGCCGGGTCCAATGGAGATGGAT
CGGTGAACTTGGGAGCGTTAGGGAGGACAGGGCGTGATGGGGCGTGGGGG
AAGTTCGAACCGGAGCATTCGAAGTTCCGGAAGGCGACGGGGCAGACAGA
ATTCTATGTACCTGTTGAGCTTAGTGAGAAGGAGAGGAAGGAAAGGAAGA
TGAATGCGGAGCAATGGGCGAGGTTCCGGCCTGGAGGGGATGTGAATGCC
CGGTGGACCAACGAGGCGCTGGTGTATTTGACGGATATGTTTCCTACGGC
GTTGGCTGGGTTTGATGATGCGGCGGAGGAGGCGGCGGTGGGGGGTGGGA
AGGGGTTGTTTTGGTTTCCCACGGTCACGTTGAATATTGATCTGAAGACG
AGGTTGCCGGAGGAAGGGGTGGAGTGGTTGTATAGTCGGGTGTATACGAA
GAAGGTGCGGGATGGACGGACGGATTTGGATGTGACGGTTGTGGATGATA
AGGGGGACGTGGTGGCGCTGAGTACGCAGGTGGGTTTGGTGTTGAGTGCC
AGTCGCAATATCGGGTCTCGTGCGAAGTTGTAGATGTCTCCCCCTCATCC
ACCACCACCTCCAGCGCACGGCTCGGCCTTCGAGTCCGCCATCAAAGTGA
CCCCCCTCAGCTCGCACCGCTACTCTGCCCATCTCCGCGACGAATGGTGC
ATCGGAGCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001897KJC3_001897Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001897-T1KJC3_001897-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001897-T1.cdsKJC3_001897-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001897-T1.utr3p1KJC3_001897-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001897-T1.exon2KJC3_001897-T1.exon2Aspergillus niger KJC3exon
KJC3_001897-T1.exon1KJC3_001897-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001897-T1.utr5p1KJC3_001897-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029069
DBxrefInterPro:IPR042171
DBxrefPFAM:PF13622
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:986434..988793 -
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