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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1006199..1010688- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001903-T2 ID=KJC3_001903-T2|Name=KJC3_001903-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4490bp|location=Sequence derived from alignment at ch2:1006199..1010688- (Aspergillus niger KJC3)
GTCCTGTAATGTATGTATTGTGGAGCACAAAAGAAAGTGCGCGGCTGGTT
GCTGCCGCGCGGCCGTATGTTTATGTTGATTGTTTCTTTCTCGTCCAAGT
TCCTTTCTTCGGCCTCGTCTTTTGCGACACATGGAAAGGCGGTGATCGGG
GCACGCTCGACTTGACATTTCTCGCCCCGATATTGCGACATCGTTCCTTG
CCTTTCCCCTACTATCGACTATTGACCTGATTCTCCTTTTACCAGAGACC
AAGTCGCTACAGTTACCGTCGTTCTTTCACCCCTCCTCCCCCTCCCCCCC
TACGGCCAGGGGATTACTTCACAATGCCCCGCGTCGCCAAACCCCAACAT
CGCCGCTCCACCGGCGGCGCATCGACCCCTCATAAGCACTCACCTATGAA
GTATGTCCTATACCATCATACCCTATCTATCCCATACAGCAGCCCATAGC
GCTGACCGCACTAGGATCCCGCTCAATGATGACATGGGCGAGAAGGCGGC
CCGTATGGAGGCCAGACAGGCGCGACATGACCGCCAGATGGATCAGATCA
AGGCCGCCGTGAAGACCCCCATGCCGCCTCGACGATACACCGGTCATGAC
TTCAATAACATGAGTCCCTCGACACCCCGAGGCTCGGGACATCGGGGCCG
CGACAGCGATGTCGATGGACGTCGTCGGGCAGTCACCCCGATGAAGCGCG
TGCCCATCTTGGCCAATTTTGAAGAATGGATGAAGATGGCGACTGACAAC
AAGATCAATGCCAATAACTCCTGGAACTTCGCCTTGATCGACTACTTCCA
CGACATGTCTCTCCTCAAGGAAGGAGATGGCGTGAACTTCCAAAAGGCCA
GTTGCACCTTGGATGGGTGCGTTAAAATCTACACCAGCAGAGTCGACAGT
GTGGCTACGGAGACGGGTAAGCTTCTGAGTGGTTTGGCGGATAGCCGGGA
TAAGAGAGCCCGCGAAGCTGGCGCAGACGGAGAGGATGCTGAGGATGACG
AGGACGGTGATGAGGGTGCGGCCAGGAAGGCGCGGAGAAAGGTTTGAACA
TTCCAAAAATGTAGACATCTTTCAGGGTAACTAACTTGGCAACTTGGCAC
TTTTAGGCACAGCGGACACATGAAGCGACCCTCGCTCCCTCCTTCGCTTC
GCTCCAGCTGAAGAAGTTTGAGCTGGAATTCTCAGTCGATCCCCTGTTCA
AGAAAGCATCAGCGGATTTTGATGAAGGCGGCGCTAAAGGCCTGCTCCTT
AACCACCTGTCAATCGATAGCCAAGGGCGCATCGTATTTGACAGCAGTGA
CGATGCCGCCGATGAGACCTCCAAGGATGCAGAGGATGCTAACCAAGAGT
CGGAAGAGTCAGAAGAACCCCAGCAGCCAGGCTCATCATCCGATCCCAGC
CAATCGGCGGATAATGTTTTTGACGATAACGCAAAAATAGACATAGCTCC
GCTGGCGAGCAAATTCTTTCCGGATTTGGACCGCCTCGAGACCCAGGATA
TCTGCCCGTCACTCAAGAACTTCGACCTCGGAGATCCAAGTGGCTCGTTA
GATATACCCTTCCTGAAAGCCCCTGAAGACTGGCGGAACGACAAGGAGGA
AAGTCAGCACCCCAACGATGCATCAGGCATCATGCTTGATGATGATAATG
CTGTGGGATTCGATGATGACGACGCTACGTTAGCCGGATTTGACCTGGGT
GGTGATGCTGGTTTTGGTGACGGTGGCGAGGCGTGGGCACGTGAGGCTGC
TCTTGAACCAATGCTCAAGGTGCACCGCGTCGATAGGGAAGGTGATGAGA
ATGCTGACGGCGAAGAGCTCGACAATGAAGATCCATATACTATCTCCCTC
AGCCACCAGCCGGAGAACCGAGACCATGAGAACATCCTCAGCTATTTCGA
TAACGCCTTGCAAAAGAATTGGGCTGGCCCCGAGCACTGGAAGATCCGGC
GGATTAAGGAGCAAACGGCCACAACCAATGCCAGCCTGGCACCAAAGCAG
CGCAAAGAGAAGGAGCCCTTCGAAATCGATTTTGGTGCTCCTCTGGATCC
TGCTATTGCTGAGATAATATACACTCCGGCCAGTTCTAACTCCACCATAT
CTCTGCCTAAGACACAGTGGAAGACTAAAGGACGCAACCTACTTCCGGAT
GACAAGCACTTCAATTCGCGCCAGCTACTTAGTCTGTTTTTGAAACCTAA
GGCTAGGATGGGCTCAAAGAAACTGGCAGGTCCTCGGCAATTCACTCAGC
GACGACAAGATCAGACTTCAGGTAACGGCGAGATGGACGAGGCATTCTGG
GCTAATCACAAAGTGGAAGATGCTGCAGCGTCTGAAGAAGGTGCTCAAGG
TGCTTATGACGCCAACTTCTTCGCAGATGATGATGGGCTAGCATTCCCCA
ACGGCTTCGGCTTGGATGATGACGACGACAACCTCCCCTTTGCGGATGCC
AGGGAAATGCTGTCTCCTCCTGCCGACGGACCTCCAGGCACACACGCAGC
CGATGCCGGTGGTGCAACAGGTCTTAGTGCCCTTCTCAATATGATGGGGT
CGGGTCCTGGGGCCACGCAGAACAGTGGTGGGTTTGGCTCGCAGCTGGTA
ACTCAGGGCGCGCGTAGGGCACGACCTGACTACGTGGCATATGCACGAGT
TGCCAAGAAGGTGGACGTTCGGCGACTGAAAGTGGAAATGTGGAAGGGCA
TGGGCGAGCGGCTAATATCAACTACACATTTCGAGCCTGCTCCTCCGGTT
GAAGACCCTACTAAATCCTCCGAAGAAGTGGAAAATCATGATGCTGAAAT
TGAAACGCAGCCGGAGCCGATGGATACCAGCCCAGACCATGGGCCTGAAG
ACGAGCAACAAGCAAACGAGAGCCTTCGATTTACTCAGATCATGAATTCA
TTGAAGACAGTGTACCCCCGAGATACACTACGCGACATAAGCACCTCCTT
CGGGTTTATTTGTCTGCTTCACCTGGCCAATGAGCAGGGCTTAGTTTTAC
GGAACGATGATGGCTCGGACGGCATCGGTGCCGGCAAGCTGGAGGAGATC
TTTGTTTCAAAGGATGCAAATGCCGTCCTCGAAGAAGGAGCCATATAATC
TAGAGCTTATGTGATAGTTCTGCCTTTGCGTGTGCAGACAGGCATGATTG
TACAGTCACGGTCTATGTGTGGGATGCCAAACGATGCGATACGAGGGATA
TTCTATTTTTCTTCCGGTTGGATATAGGCTTTGGGTTTCTATTGGGAGGG
AGTTCTAGTGGTCGGGTGGGTGGTATGCGACTTTCGAGTTCTTCGCGTTC
CTCTTGGGCAAATGACAGGCCTACATGTCAGGGTTTGTCACCGTTATGGT
TTCGTGATTCTTTCTACATGTTCATACGTTCCTGAATATATCAAGTACAC
CATGTCACTTCCTTGTTTACATAATAACGAAGAGATCTGGTTAACTACTC
TTTATTCGAAAAGATATCAATTGTCCAACTAATGCAACCCAATAACCTGG
CTGTTCGCAACCAAGGACAACAACACTAGGATTAACCATACCCGACCATT
ACTTGTAGTCTGCAATTACATGCCATGATATGCCAGTGTAGGCCACGGCA
AAAAGAAACAGAGGGAACAGTTAGACAAAAAGCCAACGTAGTTGAGTGTA
TCACTGGTATAAAAGCAAAAAAGACAACAAATTTGACACTTATATAGAAA
GTGGAGGGTTATCAATAGATGGAGGGAAATGGCCGTAAGGTAGTCCAGGA
ACAGGTGAGGGACCGCGTCATATCGATAACAAATCAATCATCATCAAAGA
GGACGAGAGCTATATGCAAACTTCAATATCAAGTACTTGAAGGCTAGACT
GGACTGACATGCCAGTGTTTGAACACTTTTTTTTTTTTTTTTTCTTCTTC
TTTTTTTTTCTCGATTTATCCACTCGTGTCGAGCCAGCAATGTGACGGTC
AGGGCTTTTTACTGGTGGGCTCCGTGGGGAAAACTAGGACTCATGGGGCC
GGAATAAGCACCGGGAATGGGCACAGATTCATAGGTTCGTTCGCCGGGTG
CTGCGCCCATGTGCTGGTTAGGGGCACTTGGAACCGGAGCTGGTGCGGGT
GGTGGTGGGAATTCACTCTGCTCTGGCTGCGGAGATGCCTGCTGCACCCG
AATTGGGGGTGGTTGAAGCTGGAACGCCGACTGCTTTTTGGAATCAGTCG
GGGGAGTGGCAAATTGGGTTGTGCACATCTGCCCGTTCTCAGCAGCAGAG
TACTGGTCTTGAGGAATCGAGGTTGACACGAAGGGAGCCTTGGGCATGGT
GGGAAATCCGGGCGTGTTAGGGACGGTGTTTTGGCGCAGCTGAGCGATGT
ACAGATCTGTTCGTGCTCTGTCTCGACGGTCCATCGACCTGGCCAGCTTT
CTCTTGCTCCAGAAGCGGTAGAAGATGACACCGTAGATAACGAGGACAAA
GACTTCAAGGACGATTTCAATGACGGCACAGACCAATCCC back to topCoding sequence (CDS) from alignment at ch2:1006199..1010688- >KJC3_001903-T2 ID=KJC3_001903-T2|Name=KJC3_001903-T2|organism=Aspergillus niger KJC3|type=CDS|length=5262bp|location=Sequence derived from alignment at ch2:1006199..1010688- (Aspergillus niger KJC3)
GCACAGCGGACACATGAAGCGACCCTCGCTCCCTCCTTCGCTTCGCTCCA
GCTGAAGAAGTTTGAGCTGGAATTCTCAGTCGATCCCCTGTTCAAGAAAG
CATCAGCGGATTTTGATGAAGGCGGCGCTAAAGGCCTGCTCCTTAACCAC
CTGTCAATCGATAGCCAAGGGCGCATCGTATTTGACAGCAGTGACGATGC
CGCCGATGAGACCTCCAAGGATGCAGAGGATGCTAACCAAGAGTCGGAAG
AGTCAGAAGAACCCCAGCAGCCAGGCTCATCATCCGATCCCAGCCAATCG
GCGGATAATGTTTTTGACGATAACGCAAAAATAGACATAGCTCCGCTGGC
GAGCAAATTCTTTCCGGATTTGGACCGCCTCGAGACCCAGGATATCTGCC
CGTCACTCAAGAACTTCGACCTCGGAGATCCAAGTGGCTCGTTAGATATA
CCCTTCCTGAAAGCCCCTGAAGACTGGCGGAACGACAAGGAGGAAAGTCA
GCACCCCAACGATGCATCAGGCATCATGCTTGATGATGATAATGCTGTGG
GATTCGATGATGACGACGCTACGTTAGCCGGATTTGACCTGGGTGGTGAT
GCTGGTTTTGGTGACGGTGGCGAGGCGTGGGCACGTGAGGCTGCTCTTGA
ACCAATGCTCAAGGTGCACCGCGTCGATAGGGAAGGTGATGAGAATGCTG
ACGGCGAAGAGCTCGACAATGAAGATCCATATACTATCTCCCTCAGCCAC
CAGCCGGAGAACCGAGACCATGAGAACATCCTCAGCTATTTCGATAACGC
CTTGCAAAAGAATTGGGCTGGCCCCGAGCACTGGAAGATCCGGCGGATTA
AGGAGCAAACGGCCACAACCAATGCCAGCCTGGCACCAAAGCAGCGCAAA
GAGAAGGAGCCCTTCGAAATCGATTTTGGTGCTCCTCTGGATCCTGCTAT
TGCTGAGATAATATACACTCCGGCCAGTTCTAACTCCACCATATCTCTGC
CTAAGACACAGTGGAAGACTAAAGGACGCAACCTACTTCCGGATGACAAG
CACTTCAATTCGCGCCAGCTACTTAGTCTGTTTTTGAAACCTAAGGCTAG
GATGGGCTCAAAGAAACTGGCAGGTCCTCGGCAATTCACTCAGCGACGAC
AAGATCAGACTTCAGGTAACGGCGAGATGGACGAGGCATTCTGGGCTAAT
CACAAAGTGGAAGATGCTGCAGCGTCTGAAGAAGGTGCTCAAGGTGCTTA
TGACGCCAACTTCTTCGCAGATGATGATGGGCTAGCATTCCCCAACGGCT
TCGGCTTGGATGATGACGACGACAACCTCCCCTTTGCGGATGCCAGGGAA
ATGCTGTCTCCTCCTGCCGACGGACCTCCAGGCACACACGCAGCCGATGC
CGGTGGTGCAACAGGTCTTAGTGCCCTTCTCAATATGATGGGGTCGGGTC
CTGGGGCCACGCAGAACAGTGGTGGGTTTGGCTCGCAGCTGGTAACTCAG
GGCGCGCGTAGGGCACGACCTGACTACGTGGCATATGCACGAGTTGCCAA
GAAGGTGGACGTTCGGCGACTGAAAGTGGAAATGTGGAAGGGCATGGGCG
AGCGGCTAATATCAACTACACATTTCGAGCCTGCTCCTCCGGTTGAAGAC
CCTACTAAATCCTCCGAAGAAGTGGAAAATCATGATGCTGAAATTGAAAC
GCAGCCGGAGCCGATGGATACCAGCCCAGACCATGGGCCTGAAGACGAGC
AACAAGCAAACGAGAGCCTTCGATTTACTCAGATCATGAATTCATTGAAG
ACAGTGTACCCCCGAGATACACTACGCGACATAAGCACCTCCTTCGGGTT
TATTTGTCTGCTTCACCTGGCCAATGAGCAGGGCTTAGTTTTACGGAACG
ATGATGGCTCGGACGGCATCGGTGCCGGCAAGCTGGAGGAGATCTTTGTT
TCAAAGGATGCAAATGCCGTCCTCGAAGAAGGAGCCATATAAATGTCCTA
TACCATCATACCCTATCTATCCCATACAGCAGCCCATAGCGCTGACCGCA
CTAGGATCCCGCTCAATGATGACATGGGCGAGAAGGCGGCCCGTATGGAG
GCCAGACAGGCGCGACATGACCGCCAGATGGATCAGATCAAGGCCGCCGT
GAAGACCCCCATGCCGCCTCGACGATACACCGGTCATGACTTCAATAACA
TGAGTCCCTCGACACCCCGAGGCTCGGGACATCGGGGCCGCGACAGCGAT
GTCGATGGACGTCGTCGGGCAGTCACCCCGATGAAGCGCGTGCCCATCTT
GGCCAATTTTGAAGAATGGATGAAGATGGCGACTGACAACAAGATCAATG
CCAATAACTCCTGGAACTTCGCCTTGATCGACTACTTCCACGACATGTCT
CTCCTCAAGGAAGGAGATGGCGTGAACTTCCAAAAGGCCAGTTGCACCTT
GGATGGGTGCGTTAAAATCTACACCAGCAGAGTCGACAGTGTGGCTACGG
AGACGGGTAAGCTTCTGAGTGGTTTGGCGGATAGCCGGGATAAGAGAGCC
CGCGAAGCTGGCGCAGACGGAGAGGATGCTGAGGATGACGAGGACGGTGA
TGAGGGTGCGGCCAGGAAGGCGCGGAGAAAGGCACAGCGGACACATGAAG
CGACCCTCGCTCCCTCCTTCGCTTCGCTCCAGCTGAAGAAGTTTGAGCTG
GAATTCTCAGTCGATCCCCTGTTCAAGAAAGCATCAGCGGATTTTGATGA
AGGCGGCGCTAAAGGCCTGCTCCTTAACCACCTGTCAATCGATAGCCAAG
GGCGCATCGTATTTGACAGCAGTGACGATGCCGCCGATGAGACCTCCAAG
GATGCAGAGGATGCTAACCAAGAGTCGGAAGAGTCAGAAGAACCCCAGCA
GCCAGGCTCATCATCCGATCCCAGCCAATCGGCGGATAATGTTTTTGACG
ATAACGCAAAAATAGACATAGCTCCGCTGGCGAGCAAATTCTTTCCGGAT
TTGGACCGCCTCGAGACCCAGGATATCTGCCCGTCACTCAAGAACTTCGA
CCTCGGAGATCCAAGTGGCTCGTTAGATATACCCTTCCTGAAAGCCCCTG
AAGACTGGCGGAACGACAAGGAGGAAAGTCAGCACCCCAACGATGCATCA
GGCATCATGCTTGATGATGATAATGCTGTGGGATTCGATGATGACGACGC
TACGTTAGCCGGATTTGACCTGGGTGGTGATGCTGGTTTTGGTGACGGTG
GCGAGGCGTGGGCACGTGAGGCTGCTCTTGAACCAATGCTCAAGGTGCAC
CGCGTCGATAGGGAAGGTGATGAGAATGCTGACGGCGAAGAGCTCGACAA
TGAAGATCCATATACTATCTCCCTCAGCCACCAGCCGGAGAACCGAGACC
ATGAGAACATCCTCAGCTATTTCGATAACGCCTTGCAAAAGAATTGGGCT
GGCCCCGAGCACTGGAAGATCCGGCGGATTAAGGAGCAAACGGCCACAAC
CAATGCCAGCCTGGCACCAAAGCAGCGCAAAGAGAAGGAGCCCTTCGAAA
TCGATTTTGGTGCTCCTCTGGATCCTGCTATTGCTGAGATAATATACACT
CCGGCCAGTTCTAACTCCACCATATCTCTGCCTAAGACACAGTGGAAGAC
TAAAGGACGCAACCTACTTCCGGATGACAAGCACTTCAATTCGCGCCAGC
TACTTAGTCTGTTTTTGAAACCTAAGGCTAGGATGGGCTCAAAGAAACTG
GCAGGTCCTCGGCAATTCACTCAGCGACGACAAGATCAGACTTCAGGTAA
CGGCGAGATGGACGAGGCATTCTGGGCTAATCACAAAGTGGAAGATGCTG
CAGCGTCTGAAGAAGGTGCTCAAGGTGCTTATGACGCCAACTTCTTCGCA
GATGATGATGGGCTAGCATTCCCCAACGGCTTCGGCTTGGATGATGACGA
CGACAACCTCCCCTTTGCGGATGCCAGGGAAATGCTGTCTCCTCCTGCCG
ACGGACCTCCAGGCACACACGCAGCCGATGCCGGTGGTGCAACAGGTCTT
AGTGCCCTTCTCAATATGATGGGGTCGGGTCCTGGGGCCACGCAGAACAG
TGGTGGGTTTGGCTCGCAGCTGGTAACTCAGGGCGCGCGTAGGGCACGAC
CTGACTACGTGGCATATGCACGAGTTGCCAAGAAGGTGGACGTTCGGCGA
CTGAAAGTGGAAATGTGGAAGGGCATGGGCGAGCGGCTAATATCAACTAC
ACATTTCGAGCCTGCTCCTCCGGTTGAAGACCCTACTAAATCCTCCGAAG
AAGTGGAAAATCATGATGCTGAAATTGAAACGCAGCCGGAGCCGATGGAT
ACCAGCCCAGACCATGGGCCTGAAGACGAGCAACAAGCAAACGAGAGCCT
TCGATTTACTCAGATCATGAATTCATTGAAGACAGTGTACCCCCGAGATA
CACTACGCGACATAAGCACCTCCTTCGGGTTTATTTGTCTGCTTCACCTG
GCCAATGAGCAGGGCTTAGTTTTACGGAACGATGATGGCTCGGACGGCAT
CGGTGCCGGCAAGCTGGAGGAGATCTTTGTTTCAAAGGATGCAAATGCCG
TCCTCGAAGAAGGAGCCATATAAATGTCCTATACCATCATACCCTATCTA
TCCCATACAGCAGCCCATAGCGCTGACCGCACTAGGATCCCGCTCAATGA
TGACATGGGCGAGAAGGCGGCCCGTATGGAGGCCAGACAGGCGCGACATG
ACCGCCAGATGGATCAGATCAAGGCCGCCGTGAAGACCCCCATGCCGCCT
CGACGATACACCGGTCATGACTTCAATAACATGAGTCCCTCGACACCCCG
AGGCTCGGGACATCGGGGCCGCGACAGCGATGTCGATGGACGTCGTCGGG
CAGTCACCCCGATGAAGCGCGTGCCCATCTTGGCCAATTTTGAAGAATGG
ATGAAGATGGCGACTGACAACAAGATCAATGCCAATAACTCCTGGAACTT
CGCCTTGATCGACTACTTCCACGACATGTCTCTCCTCAAGGAAGGAGATG
GCGTGAACTTCCAAAAGGCCAGTTGCACCTTGGATGGGTGCGTTAAAATC
TACACCAGCAGAGTCGACAGTGTGGCTACGGAGACGGGTAAGCTTCTGAG
TGGTTTGGCGGATAGCCGGGATAAGAGAGCCCGCGAAGCTGGCGCAGACG
GAGAGGATGCTGAGGATGACGAGGACGGTGATGAGGGTGCGGCCAGGAAG
GCGCGGAGAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000796 | condensin complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007076 | mitotic chromosome condensation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001903-T2.utr3p1 | KJC3_001903-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001903-T2.utr5p1 | KJC3_001903-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260WU6 |
| DBxref | InterPro:IPR022816 |
| DBxref | PFAM:PF05786 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1006199..1010688 - |
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