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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1053057..1055141+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001914-T1 ID=KJC3_001914-T1|Name=KJC3_001914-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2085bp|location=Sequence derived from alignment at ch2:1053057..1055141+ (Aspergillus niger KJC3)
ATGACATATCCTAATGGTGACGCTCCTTCGGCTCTCTCGAACTCAACGCA
GGGGGGTCCGAACGGAGCCAAACCACAGGCCTTCAATAAGTCGCATGAAG
TAGAGGAGCCTCCTCCACAGTCAGGTATGTATCTTACCTGGATTAATCAC
TCTGTGGGATCTTTGGTAGAACTGAAATCTCGCTCAGTGTCGATAACTAC
CACTTCCCGCGAAGCTCCTCGATCGGATAATGAACAACAACATCCCAAAA
CACAGGCCCAGATGGCTCAGGCCGCACATGGAGGAGCGCCCTCTCTTAGC
ATGCGGGACATGAGATCCGCGTTGCCTGGGTATCAGAATCATTCCATCCT
TTATGAGCAGCATCATATTCAGCAGCCCTTTGTTCCGACGGCTCACCCTC
ATGGCGTTGTCTACGCAATGCCGCCATTACCGTCATTCACAGGACCGCCA
ATAAATCCTAATATGGCCTTTAATGGTCCCTTCAATCAGGTATACACGCC
TTATCTTCAGCAGCAACCTGAGGACCCTCTTCTGCCTCCTGGTGCGGCGG
GCTATCAGTCCTTGGGGCCCCATTCAGCCGCTCACATGAATGTCCATATA
CCTGGCCAATCTGGATATGGACCGAACTATTACACCCAGACCGCATACAC
GGCAGCCCTTGGACACGGCCCGGGACCTCCGACTACATCATCTCCAGTGC
AAGTGCAACCACGCGTTCAGCCTCGGAACACATCGGGTCCAAAAACTAAA
TTGGCATCCGGCTTGGGGAAAGAAAACAGGCAACGGCGTCTGGATCTGGA
ATATGACGTCTCAAAGACCATCGTGGACGGATCAACACCTATGAGGCCCC
ACCCTGTTCAAACATTTTCTGCTGGTAAGTCTGGGCCTGACCATGCGAGA
AGCGAGTTATGTGTTTTTGACATGACTGCGGTGCACCAGACTCAGGATCG
CATTCGTCTAATACCACTACGTCAAGTGCTCCAAGAGGACCGCCGCGAAA
GCCAAAGCAATCTGGGCATGCACTGTGGGTCGGCAATCTTCCTCCCGGTA
CCAATATCGTTGACTTGAAGGACTACTTTTCTCAGGACGCCACAAAGGAA
CTGGAAAGCGTCTTCCTCATCTCGAAGAGTAACTGCGCTTTTATCAATTA
CAAAACGGAGGCCGCCTGTGCCGCGGCATTGTCAAGGTTCAACGATTCTA
GATTCCATGGAGCACGTCTTGTATGTCGGCTACGCCAGGGGGCTGTTCCT
CTGGGGTCTAATGCTGAAGCTATGGGTTCTTCTACCCCTGCTATATATCA
GGATGAAGAAACCAAGTTATCGGACGCTGTGACTGAGAACAAGGCTACAG
AAGGTAGCCTTTCGCACAGTCGAGTCCGTAGCAGATACTTCATAGTCAAA
AGTTTAACTGTTGATGATCTCGAACTCAGTCGACAGAACAACATCTGGGC
CACTCAAACTCATAATGAGAAGCAGCTAAACGAAGCTTACGAGGTGAGCT
CTGTGCCCCCACCTATTATATCCATATCAGTAGGGGAGAATGATCGGTCG
CTGACAACTCAACCAGAATGCTGATGATGTCTATCTCATCTTTTCCGCCA
ATAAGTCAGGTGAATATTATGGATATGCCCGTATGATGTCGCCGATACAA
GATGACGAGAACTTGGCGTTGGAGATGCCCTCGCGGTTGGACAACCCCCC
GGATCCCGAGACTCTAGACGTGACGCCCACTCCAGCAACATCCACTGCGC
CTAACGGACGAATAATCAATGACTCTGCGCGGGGGACCATATTCTGGGAG
GCGGAAACCTCAGAGGATGAGAGCGGTACGAGCAAGGAGAAGGAGAAGGA
GAAGGTTATTCACGAAAAACCGGAAGAAGCTACAGATACGGGGGCACAAT
TGATTGGGAAGCCGTTCAGGATCCGATGGCTCTCGACTACACGAGTCCCT
TTTCATCGTACGAGAGGGTTGCGGAATCCCTGGAACTCGAACCGAGAAGT
GAAGATCGCTCGCGACGGTACGGAGATCGAGCCGGAGGTGGGGTGGAAAC
TTTTGCAGTTATTCCACTCTCAGCCTCAAGACTAG back to topCoding sequence (CDS) from alignment at ch2:1053057..1055141+ >KJC3_001914-T1 ID=KJC3_001914-T1|Name=KJC3_001914-T1|organism=Aspergillus niger KJC3|type=CDS|length=7536bp|location=Sequence derived from alignment at ch2:1053057..1055141+ (Aspergillus niger KJC3)
ATGACATATCCTAATGGTGACGCTCCTTCGGCTCTCTCGAACTCAACGCA
GGGGGGTCCGAACGGAGCCAAACCACAGGCCTTCAATAAGTCGCATGAAG
TAGAGGAGCCTCCTCCACAGTCAGTGTCGATAACTACCACTTCCCGCGAA
GCTCCTCGATCGGATAATGAACAACAACATCCCAAAACACAGGCCCAGAT
GGCTCAGGCCGCACATGGAGGAGCGCCCTCTCTTAGCATGCGGGACATGA
GATCCGCGTTGCCTGGGTATCAGAATCATTCCATCCTTTATGAGCAGCAT
CATATTCAGCAGCCCTTTGTTCCGACGGCTCACCCTCATGGCGTTGTCTA
CGCAATGCCGCCATTACCGTCATTCACAGGACCGCCAATAAATCCTAATA
TGGCCTTTAATGGTCCCTTCAATCAGGTATACACGCCTTATCTTCAGCAG
CAACCTGAGGACCCTCTTCTGCCTCCTGGTGCGGCGGGCTATCAGTCCTT
GGGGCCCCATTCAGCCGCTCACATGAATGTCCATATACCTGGCCAATCTG
GATATGGACCGAACTATTACACCCAGACCGCATACACGGCAGCCCTTGGA
CACGGCCCGGGACCTCCGACTACATCATCTCCAGTGCAAGTGCAACCACG
CGTTCAGCCTCGGAACACATCGGGTCCAAAAACTAAATTGGCATCCGGCT
TGGGGAAAGAAAACAGGCAACGGCGTCTGGATCTGGAATATGACGTCTCA
AAGACCATCGTGGACGGATCAACACCTATGAGGCCCCACCCTGTTCAAAC
ATTTTCTGCTGACTCAGGATCGCATTCGTCTAATACCACTACGTCAAGTG
CTCCAAGAGGACCGCCGCGAAAGCCAAAGCAATCTGGGCATGCACTGTGG
GTCGGCAATCTTCCTCCCGGTACCAATATCGTTGACTTGAAGGACTACTT
TTCTCAGGACGCCACAAAGGAACTGGAAAGCGTCTTCCTCATCTCGAAGA
GTAACTGCGCTTTTATCAATTACAAAACGGAGGCCGCCTGTGCCGCGGCA
TTGTCAAGGTTCAACGATTCTAGATTCCATGGAGCACGTCTTGTATGTCG
GCTACGCCAGGGGGCTGTTCCTCTGGGGTCTAATGCTGAAGCTATGGGTT
CTTCTACCCCTGCTATATATCAGGATGAAGAAACCAAGTTATCGGACGCT
GTGACTGAGAACAAGGCTACAGAAGGTAGCCTTTCGCACAGTCGAGTCCG
TAGCAGATACTTCATAGTCAAAAGTTTAACTGTTGATGATCTCGAACTCA
GTCGACAGAACAACATCTGGGCCACTCAAACTCATAATGAGAAGCAGCTA
AACGAAGCTTACGAGAATGCTGATGATGTCTATCTCATCTTTTCCGCCAA
TAAGTCAGGTGAATATTATGGATATGCCCGTATGATGTCGCCGATACAAG
ATGACGAGAACTTGGCGTTGGAGATGCCCTCGCGGTTGGACAACCCCCCG
GATCCCGAGACTCTAGACGTGACGCCCACTCCAGCAACATCCACTGCGCC
TAACGGACGAATAATCAATGACTCTGCGCGGGGGACCATATTCTGGGAGG
CGGAAACCTCAGAGGATGAGAGCGGTACGAGCAAGGAGAAGGAGAAGGAG
AAGGTTATTCACGAAAAACCGGAAGAAGCTACAGATACGGGGGCACAATT
GATTGGGAAGCCGTTCAGGATCCGATGGCTCTCGACTACACGAGTCCCTT
TTCATCGTACGAGAGGGTTGCGGAATCCCTGGAACTCGAACCGAGAAGTG
AAGATCGCTCGCGACGGTACGGAGATCGAGCCGGAGGTGGGGTGGAAACT
TTTGCAGTTATTCCACTCTCAGCCTCAAGACTAGATGACATATCCTAATG
GTGACGCTCCTTCGGCTCTCTCGAACTCAACGCAGGGGGGTCCGAACGGA
GCCAAACCACAGGCCTTCAATAAGTCGCATGAAGTAGAGGAGCCTCCTCC
ACAGTCAGTGTCGATAACTACCACTTCCCGCGAAGCTCCTCGATCGGATA
ATGAACAACAACATCCCAAAACACAGGCCCAGATGGCTCAGGCCGCACAT
GGAGGAGCGCCCTCTCTTAGCATGCGGGACATGAGATCCGCGTTGCCTGG
GTATCAGAATCATTCCATCCTTTATGAGCAGCATCATATTCAGCAGCCCT
TTGTTCCGACGGCTCACCCTCATGGCGTTGTCTACGCAATGCCGCCATTA
CCGTCATTCACAGGACCGCCAATAAATCCTAATATGGCCTTTAATGGTCC
CTTCAATCAGGTATACACGCCTTATCTTCAGCAGCAACCTGAGGACCCTC
TTCTGCCTCCTGGTGCGGCGGGCTATCAGTCCTTGGGGCCCCATTCAGCC
GCTCACATGAATGTCCATATACCTGGCCAATCTGGATATGGACCGAACTA
TTACACCCAGACCGCATACACGGCAGCCCTTGGACACGGCCCGGGACCTC
CGACTACATCATCTCCAGTGCAAGTGCAACCACGCGTTCAGCCTCGGAAC
ACATCGGGTCCAAAAACTAAATTGGCATCCGGCTTGGGGAAAGAAAACAG
GCAACGGCGTCTGGATCTGGAATATGACGTCTCAAAGACCATCGTGGACG
GATCAACACCTATGAGGCCCCACCCTGTTCAAACATTTTCTGCTGACTCA
GGATCGCATTCGTCTAATACCACTACGTCAAGTGCTCCAAGAGGACCGCC
GCGAAAGCCAAAGCAATCTGGGCATGCACTGTGGGTCGGCAATCTTCCTC
CCGGTACCAATATCGTTGACTTGAAGGACTACTTTTCTCAGGACGCCACA
AAGGAACTGGAAAGCGTCTTCCTCATCTCGAAGAGTAACTGCGCTTTTAT
CAATTACAAAACGGAGGCCGCCTGTGCCGCGGCATTGTCAAGGTTCAACG
ATTCTAGATTCCATGGAGCACGTCTTGTATGTCGGCTACGCCAGGGGGCT
GTTCCTCTGGGGTCTAATGCTGAAGCTATGGGTTCTTCTACCCCTGCTAT
ATATCAGGATGAAGAAACCAAGTTATCGGACGCTGTGACTGAGAACAAGG
CTACAGAAGGTAGCCTTTCGCACAGTCGAGTCCGTAGCAGATACTTCATA
GTCAAAAGTTTAACTGTTGATGATCTCGAACTCAGTCGACAGAACAACAT
CTGGGCCACTCAAACTCATAATGAGAAGCAGCTAAACGAAGCTTACGAGA
ATGCTGATGATGTCTATCTCATCTTTTCCGCCAATAAGTCAGGTGAATAT
TATGGATATGCCCGTATGATGTCGCCGATACAAGATGACGAGAACTTGGC
GTTGGAGATGCCCTCGCGGTTGGACAACCCCCCGGATCCCGAGACTCTAG
ACGTGACGCCCACTCCAGCAACATCCACTGCGCCTAACGGACGAATAATC
AATGACTCTGCGCGGGGGACCATATTCTGGGAGGCGGAAACCTCAGAGGA
TGAGAGCGGTACGAGCAAGGAGAAGGAGAAGGAGAAGGTTATTCACGAAA
AACCGGAAGAAGCTACAGATACGGGGGCACAATTGATTGGGAAGCCGTTC
AGGATCCGATGGCTCTCGACTACACGAGTCCCTTTTCATCGTACGAGAGG
GTTGCGGAATCCCTGGAACTCGAACCGAGAAGTGAAGATCGCTCGCGACG
GTACGGAGATCGAGCCGGAGGTGGGGTGGAAACTTTTGCAGTTATTCCAC
TCTCAGCCTCAAGACTAGATGACATATCCTAATGGTGACGCTCCTTCGGC
TCTCTCGAACTCAACGCAGGGGGGTCCGAACGGAGCCAAACCACAGGCCT
TCAATAAGTCGCATGAAGTAGAGGAGCCTCCTCCACAGTCAGTGTCGATA
ACTACCACTTCCCGCGAAGCTCCTCGATCGGATAATGAACAACAACATCC
CAAAACACAGGCCCAGATGGCTCAGGCCGCACATGGAGGAGCGCCCTCTC
TTAGCATGCGGGACATGAGATCCGCGTTGCCTGGGTATCAGAATCATTCC
ATCCTTTATGAGCAGCATCATATTCAGCAGCCCTTTGTTCCGACGGCTCA
CCCTCATGGCGTTGTCTACGCAATGCCGCCATTACCGTCATTCACAGGAC
CGCCAATAAATCCTAATATGGCCTTTAATGGTCCCTTCAATCAGGTATAC
ACGCCTTATCTTCAGCAGCAACCTGAGGACCCTCTTCTGCCTCCTGGTGC
GGCGGGCTATCAGTCCTTGGGGCCCCATTCAGCCGCTCACATGAATGTCC
ATATACCTGGCCAATCTGGATATGGACCGAACTATTACACCCAGACCGCA
TACACGGCAGCCCTTGGACACGGCCCGGGACCTCCGACTACATCATCTCC
AGTGCAAGTGCAACCACGCGTTCAGCCTCGGAACACATCGGGTCCAAAAA
CTAAATTGGCATCCGGCTTGGGGAAAGAAAACAGGCAACGGCGTCTGGAT
CTGGAATATGACGTCTCAAAGACCATCGTGGACGGATCAACACCTATGAG
GCCCCACCCTGTTCAAACATTTTCTGCTGACTCAGGATCGCATTCGTCTA
ATACCACTACGTCAAGTGCTCCAAGAGGACCGCCGCGAAAGCCAAAGCAA
TCTGGGCATGCACTGTGGGTCGGCAATCTTCCTCCCGGTACCAATATCGT
TGACTTGAAGGACTACTTTTCTCAGGACGCCACAAAGGAACTGGAAAGCG
TCTTCCTCATCTCGAAGAGTAACTGCGCTTTTATCAATTACAAAACGGAG
GCCGCCTGTGCCGCGGCATTGTCAAGGTTCAACGATTCTAGATTCCATGG
AGCACGTCTTGTATGTCGGCTACGCCAGGGGGCTGTTCCTCTGGGGTCTA
ATGCTGAAGCTATGGGTTCTTCTACCCCTGCTATATATCAGGATGAAGAA
ACCAAGTTATCGGACGCTGTGACTGAGAACAAGGCTACAGAAGGTAGCCT
TTCGCACAGTCGAGTCCGTAGCAGATACTTCATAGTCAAAAGTTTAACTG
TTGATGATCTCGAACTCAGTCGACAGAACAACATCTGGGCCACTCAAACT
CATAATGAGAAGCAGCTAAACGAAGCTTACGAGAATGCTGATGATGTCTA
TCTCATCTTTTCCGCCAATAAGTCAGGTGAATATTATGGATATGCCCGTA
TGATGTCGCCGATACAAGATGACGAGAACTTGGCGTTGGAGATGCCCTCG
CGGTTGGACAACCCCCCGGATCCCGAGACTCTAGACGTGACGCCCACTCC
AGCAACATCCACTGCGCCTAACGGACGAATAATCAATGACTCTGCGCGGG
GGACCATATTCTGGGAGGCGGAAACCTCAGAGGATGAGAGCGGTACGAGC
AAGGAGAAGGAGAAGGAGAAGGTTATTCACGAAAAACCGGAAGAAGCTAC
AGATACGGGGGCACAATTGATTGGGAAGCCGTTCAGGATCCGATGGCTCT
CGACTACACGAGTCCCTTTTCATCGTACGAGAGGGTTGCGGAATCCCTGG
AACTCGAACCGAGAAGTGAAGATCGCTCGCGACGGTACGGAGATCGAGCC
GGAGGTGGGGTGGAAACTTTTGCAGTTATTCCACTCTCAGCCTCAAGACT
AGATGACATATCCTAATGGTGACGCTCCTTCGGCTCTCTCGAACTCAACG
CAGGGGGGTCCGAACGGAGCCAAACCACAGGCCTTCAATAAGTCGCATGA
AGTAGAGGAGCCTCCTCCACAGTCAGTGTCGATAACTACCACTTCCCGCG
AAGCTCCTCGATCGGATAATGAACAACAACATCCCAAAACACAGGCCCAG
ATGGCTCAGGCCGCACATGGAGGAGCGCCCTCTCTTAGCATGCGGGACAT
GAGATCCGCGTTGCCTGGGTATCAGAATCATTCCATCCTTTATGAGCAGC
ATCATATTCAGCAGCCCTTTGTTCCGACGGCTCACCCTCATGGCGTTGTC
TACGCAATGCCGCCATTACCGTCATTCACAGGACCGCCAATAAATCCTAA
TATGGCCTTTAATGGTCCCTTCAATCAGGTATACACGCCTTATCTTCAGC
AGCAACCTGAGGACCCTCTTCTGCCTCCTGGTGCGGCGGGCTATCAGTCC
TTGGGGCCCCATTCAGCCGCTCACATGAATGTCCATATACCTGGCCAATC
TGGATATGGACCGAACTATTACACCCAGACCGCATACACGGCAGCCCTTG
GACACGGCCCGGGACCTCCGACTACATCATCTCCAGTGCAAGTGCAACCA
CGCGTTCAGCCTCGGAACACATCGGGTCCAAAAACTAAATTGGCATCCGG
CTTGGGGAAAGAAAACAGGCAACGGCGTCTGGATCTGGAATATGACGTCT
CAAAGACCATCGTGGACGGATCAACACCTATGAGGCCCCACCCTGTTCAA
ACATTTTCTGCTGACTCAGGATCGCATTCGTCTAATACCACTACGTCAAG
TGCTCCAAGAGGACCGCCGCGAAAGCCAAAGCAATCTGGGCATGCACTGT
GGGTCGGCAATCTTCCTCCCGGTACCAATATCGTTGACTTGAAGGACTAC
TTTTCTCAGGACGCCACAAAGGAACTGGAAAGCGTCTTCCTCATCTCGAA
GAGTAACTGCGCTTTTATCAATTACAAAACGGAGGCCGCCTGTGCCGCGG
CATTGTCAAGGTTCAACGATTCTAGATTCCATGGAGCACGTCTTGTATGT
CGGCTACGCCAGGGGGCTGTTCCTCTGGGGTCTAATGCTGAAGCTATGGG
TTCTTCTACCCCTGCTATATATCAGGATGAAGAAACCAAGTTATCGGACG
CTGTGACTGAGAACAAGGCTACAGAAGGTAGCCTTTCGCACAGTCGAGTC
CGTAGCAGATACTTCATAGTCAAAAGTTTAACTGTTGATGATCTCGAACT
CAGTCGACAGAACAACATCTGGGCCACTCAAACTCATAATGAGAAGCAGC
TAAACGAAGCTTACGAGAATGCTGATGATGTCTATCTCATCTTTTCCGCC
AATAAGTCAGGTGAATATTATGGATATGCCCGTATGATGTCGCCGATACA
AGATGACGAGAACTTGGCGTTGGAGATGCCCTCGCGGTTGGACAACCCCC
CGGATCCCGAGACTCTAGACGTGACGCCCACTCCAGCAACATCCACTGCG
CCTAACGGACGAATAATCAATGACTCTGCGCGGGGGACCATATTCTGGGA
GGCGGAAACCTCAGAGGATGAGAGCGGTACGAGCAAGGAGAAGGAGAAGG
AGAAGGTTATTCACGAAAAACCGGAAGAAGCTACAGATACGGGGGCACAA
TTGATTGGGAAGCCGTTCAGGATCCGATGGCTCTCGACTACACGAGTCCC
TTTTCATCGTACGAGAGGGTTGCGGAATCCCTGGAACTCGAACCGAGAAG
TGAAGATCGCTCGCGACGGTACGGAGATCGAGCCGGAGGTGGGGTGGAAA
CTTTTGCAGTTATTCCACTCTCAGCCTCAAGACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR007275 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF04146 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1053057..1055141 + |
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