You are here

Home

KJC3_001927-T1, KJC3_001927-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001927-T1
Unique NameKJC3_001927-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1095480..1097318-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001927-T1 ID=KJC3_001927-T1|Name=KJC3_001927-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1839bp|location=Sequence derived from alignment at ch2:1095480..1097318- (Aspergillus niger KJC3)
CGCTGGACATCATGAGCACCACCTGGCGGCAATTGTCGAACCAAATCATT
CCCTTCTCTGTGGTCAGCACATGAACAGATACTCCCTCAGATATTCCATT
CGATCCTGACCTGTATATCCTCGTCTTACAAACAAGATCAGATACAGTTA
CTGTGGAACGTCGTGGTACTTCTAATACTGTCTAGCTACTTTCCCGCCAG
CTCCATAACATGCAGACGACTCCTGAGTCCCATGTCGCGAATGGTTCGAG
CTTGATAACCACTTTCCACCTGGCACAGAAGGCACCCCTCATACTTCAGC
GTCAGTCTTCCAGTGTGGAAACATTCGCACCCTCATCGGTACGAGGGATT
GAGAACTATGGTGTAGTAGAGCAATTATTATTTTCATGCCTACAGTCGGG
GGACGACAAATCTGCGCTACTTTGTACTGAGCAGCTAGCAGCTCGATTTG
GCGTGACTGATGAGAGAATACTTGGGTTGAGGGGCATGTATGAAGAAGCG
GTCGCCGAGAATCGATCCAGTCTTGAAGAATGCTTGCAAACATATGACCT
TGCGCTTTCCGAAAATCCCGTCAATTTGGTCCGTTCTTCCTGCCACTCAA
TAGACTCAATGCTAATATACAAGGAAGCCCGTACTCAAGCGTCGGATCGC
GCTCCTACGCTCGCTGTCCAGGCCTGCGGATGCCATTTCTAGTCTCATCA
AACTCCTGGACGCTGTCCCAACAGATGCGGAGGCTTGGTGTGAACTTGCA
GATCTCTACTACTCTCAGGGGATGAGCTCACAGGCAGCTTTCTGTCTTGA
GGAGGCCTTATTAATTGTGCCAAATTCTTGGAATGTATGAACAAAGGATC
ATGGGAAGGGCAGTGAGTGGAACGCTGATTCAATTTACCTTTAGATTCAT
GCGTTCCTCGGCGAAATCTTGTATTCGGGTGCCTGTGCTTCTGAAACAGG
GGATTGCTCCCAGCTTTTGGAGGTGTCGATACATCATTTCTCCCGCAGCA
TAGAACTCTGCACTGATTATTTGCGGGGCTTCTACGGACTAGTCCTAGTA
GGGTTCCCAATACTTCGCCTTGATGGATGTTAAAGACTGACGCTGAAGCA
GGCAACGTCGCTCCTGGGGAGGAACAGACGTCTAAAGGATCGCTCTCGTG
ACCACCCACCGGTTCAAGCAAGCCTTCTTACTAACAGGCTCCTCGACGAG
CTGATCCTTTTCGCAAGAAACAGACTCGATGAGATTGTGAGATCCCGGTC
TTCGGACCATCACTCTTGGAAGGGTAACCAAGGCGAGCTCATTGCGGCGA
AGGAACTCCTTCACCGGCTCGACAATTTTCCCTTATAGGAGACATTGTTG
GCTTATTCCCTTCTGCCACGTGCATCGGGTGTTTCATTTTGATCAGTTAC
AATAATATTCTAGCTACCCGTCGAGCTCACAATAAGCAGTGCCCTAGAGC
AAGTATGTAGGTGAACATTCTCCTTTTATATATAGTAACATTTCATTTGT
TTTGCCTGTTTGTCTGTCCGACTCTCTGATTTTTTCTTTTTGTTTGCTTT
TGTTTATTTATTTATTTTTTTAAATTTCTTTTTTTACAAGCAGTTATGCT
ACCGTAAAGTGTACTTTTACAAAGTAAAGATCTGTAGTAGATCGCATTCT
GAATATTGCTTACAAAGGTTGCTGACATCAGGTCTAATGTTGCCTATAAC
TAAGTCTTCCTATCTATCTTAACACTGTTACCTCGTTGTTGTTCATTATT
CGCAGTTATTCTTGCCAATGTGTCCAGAGAGCGGATCCTCCGAGAATCTG
AGGCATGACGGCGTTAGAATCGCTTTTCATTCCAACCGG
back to top

Coding sequence (CDS) from alignment at ch2:1095480..1097318-

>KJC3_001927-T1 ID=KJC3_001927-T1|Name=KJC3_001927-T1|organism=Aspergillus niger KJC3|type=CDS|length=3864bp|location=Sequence derived from alignment at ch2:1095480..1097318- (Aspergillus niger KJC3)
GCAACGTCGCTCCTGGGGAGGAACAGACGTCTAAAGGATCGCTCTCGTGA
CCACCCACCGGTTCAAGCAAGCCTTCTTACTAACAGGCTCCTCGACGAGC
TGATCCTTTTCGCAAGAAACAGACTCGATGAGATTGTGAGATCCCGGTCT
TCGGACCATCACTCTTGGAAGGGTAACCAAGGCGAGCTCATTGCGGCGAA
GGAACTCCTTCACCGGCTCGACAATTTTCCCTTATAGATTCATGCGTTCC
TCGGCGAAATCTTGTATTCGGGTGCCTGTGCTTCTGAAACAGGGGATTGC
TCCCAGCTTTTGGAGGTGTCGATACATCATTTCTCCCGCAGCATAGAACT
CTGCACTGATTATTTGCGGGGCTTCTACGGACTAGTCCTACCCGTACTCA
AGCGTCGGATCGCGCTCCTACGCTCGCTGTCCAGGCCTGCGGATGCCATT
TCTAGTCTCATCAAACTCCTGGACGCTGTCCCAACAGATGCGGAGGCTTG
GTGTGAACTTGCAGATCTCTACTACTCTCAGGGGATGAGCTCACAGGCAG
CTTTCTGTCTTGAGGAGGCCTTATTAATTGTGCCAAATTCTTGGAATATG
CAGACGACTCCTGAGTCCCATGTCGCGAATGGTTCGAGCTTGATAACCAC
TTTCCACCTGGCACAGAAGGCACCCCTCATACTTCAGCGTCAGTCTTCCA
GTGTGGAAACATTCGCACCCTCATCGGTACGAGGGATTGAGAACTATGGT
GTAGTAGAGCAATTATTATTTTCATGCCTACAGTCGGGGGACGACAAATC
TGCGCTACTTTGTACTGAGCAGCTAGCAGCTCGATTTGGCGTGACTGATG
AGAGAATACTTGGGTTGAGGGGCATGTATGAAGAAGCGGTCGCCGAGAAT
CGATCCAGTCTTGAAGAATGCTTGCAAACATATGACCTTGCGCTTTCCGA
AAATCCCGTCAATTTGGCAACGTCGCTCCTGGGGAGGAACAGACGTCTAA
AGGATCGCTCTCGTGACCACCCACCGGTTCAAGCAAGCCTTCTTACTAAC
AGGCTCCTCGACGAGCTGATCCTTTTCGCAAGAAACAGACTCGATGAGAT
TGTGAGATCCCGGTCTTCGGACCATCACTCTTGGAAGGGTAACCAAGGCG
AGCTCATTGCGGCGAAGGAACTCCTTCACCGGCTCGACAATTTTCCCTTA
TAGATTCATGCGTTCCTCGGCGAAATCTTGTATTCGGGTGCCTGTGCTTC
TGAAACAGGGGATTGCTCCCAGCTTTTGGAGGTGTCGATACATCATTTCT
CCCGCAGCATAGAACTCTGCACTGATTATTTGCGGGGCTTCTACGGACTA
GTCCTACCCGTACTCAAGCGTCGGATCGCGCTCCTACGCTCGCTGTCCAG
GCCTGCGGATGCCATTTCTAGTCTCATCAAACTCCTGGACGCTGTCCCAA
CAGATGCGGAGGCTTGGTGTGAACTTGCAGATCTCTACTACTCTCAGGGG
ATGAGCTCACAGGCAGCTTTCTGTCTTGAGGAGGCCTTATTAATTGTGCC
AAATTCTTGGAATATGCAGACGACTCCTGAGTCCCATGTCGCGAATGGTT
CGAGCTTGATAACCACTTTCCACCTGGCACAGAAGGCACCCCTCATACTT
CAGCGTCAGTCTTCCAGTGTGGAAACATTCGCACCCTCATCGGTACGAGG
GATTGAGAACTATGGTGTAGTAGAGCAATTATTATTTTCATGCCTACAGT
CGGGGGACGACAAATCTGCGCTACTTTGTACTGAGCAGCTAGCAGCTCGA
TTTGGCGTGACTGATGAGAGAATACTTGGGTTGAGGGGCATGTATGAAGA
AGCGGTCGCCGAGAATCGATCCAGTCTTGAAGAATGCTTGCAAACATATG
ACCTTGCGCTTTCCGAAAATCCCGTCAATTTGGCAACGTCGCTCCTGGGG
AGGAACAGACGTCTAAAGGATCGCTCTCGTGACCACCCACCGGTTCAAGC
AAGCCTTCTTACTAACAGGCTCCTCGACGAGCTGATCCTTTTCGCAAGAA
ACAGACTCGATGAGATTGTGAGATCCCGGTCTTCGGACCATCACTCTTGG
AAGGGTAACCAAGGCGAGCTCATTGCGGCGAAGGAACTCCTTCACCGGCT
CGACAATTTTCCCTTATAGATTCATGCGTTCCTCGGCGAAATCTTGTATT
CGGGTGCCTGTGCTTCTGAAACAGGGGATTGCTCCCAGCTTTTGGAGGTG
TCGATACATCATTTCTCCCGCAGCATAGAACTCTGCACTGATTATTTGCG
GGGCTTCTACGGACTAGTCCTACCCGTACTCAAGCGTCGGATCGCGCTCC
TACGCTCGCTGTCCAGGCCTGCGGATGCCATTTCTAGTCTCATCAAACTC
CTGGACGCTGTCCCAACAGATGCGGAGGCTTGGTGTGAACTTGCAGATCT
CTACTACTCTCAGGGGATGAGCTCACAGGCAGCTTTCTGTCTTGAGGAGG
CCTTATTAATTGTGCCAAATTCTTGGAATATGCAGACGACTCCTGAGTCC
CATGTCGCGAATGGTTCGAGCTTGATAACCACTTTCCACCTGGCACAGAA
GGCACCCCTCATACTTCAGCGTCAGTCTTCCAGTGTGGAAACATTCGCAC
CCTCATCGGTACGAGGGATTGAGAACTATGGTGTAGTAGAGCAATTATTA
TTTTCATGCCTACAGTCGGGGGACGACAAATCTGCGCTACTTTGTACTGA
GCAGCTAGCAGCTCGATTTGGCGTGACTGATGAGAGAATACTTGGGTTGA
GGGGCATGTATGAAGAAGCGGTCGCCGAGAATCGATCCAGTCTTGAAGAA
TGCTTGCAAACATATGACCTTGCGCTTTCCGAAAATCCCGTCAATTTGGC
AACGTCGCTCCTGGGGAGGAACAGACGTCTAAAGGATCGCTCTCGTGACC
ACCCACCGGTTCAAGCAAGCCTTCTTACTAACAGGCTCCTCGACGAGCTG
ATCCTTTTCGCAAGAAACAGACTCGATGAGATTGTGAGATCCCGGTCTTC
GGACCATCACTCTTGGAAGGGTAACCAAGGCGAGCTCATTGCGGCGAAGG
AACTCCTTCACCGGCTCGACAATTTTCCCTTATAGATTCATGCGTTCCTC
GGCGAAATCTTGTATTCGGGTGCCTGTGCTTCTGAAACAGGGGATTGCTC
CCAGCTTTTGGAGGTGTCGATACATCATTTCTCCCGCAGCATAGAACTCT
GCACTGATTATTTGCGGGGCTTCTACGGACTAGTCCTACCCGTACTCAAG
CGTCGGATCGCGCTCCTACGCTCGCTGTCCAGGCCTGCGGATGCCATTTC
TAGTCTCATCAAACTCCTGGACGCTGTCCCAACAGATGCGGAGGCTTGGT
GTGAACTTGCAGATCTCTACTACTCTCAGGGGATGAGCTCACAGGCAGCT
TTCTGTCTTGAGGAGGCCTTATTAATTGTGCCAAATTCTTGGAATATGCA
GACGACTCCTGAGTCCCATGTCGCGAATGGTTCGAGCTTGATAACCACTT
TCCACCTGGCACAGAAGGCACCCCTCATACTTCAGCGTCAGTCTTCCAGT
GTGGAAACATTCGCACCCTCATCGGTACGAGGGATTGAGAACTATGGTGT
AGTAGAGCAATTATTATTTTCATGCCTACAGTCGGGGGACGACAAATCTG
CGCTACTTTGTACTGAGCAGCTAGCAGCTCGATTTGGCGTGACTGATGAG
AGAATACTTGGGTTGAGGGGCATGTATGAAGAAGCGGTCGCCGAGAATCG
ATCCAGTCTTGAAGAATGCTTGCAAACATATGACCTTGCGCTTTCCGAAA
ATCCCGTCAATTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001927KJC3_001927Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001927-T1KJC3_001927-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001927-T1.cdsKJC3_001927-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001927-T1.utr3p1KJC3_001927-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001927-T1.exon4KJC3_001927-T1.exon4Aspergillus niger KJC3exon
KJC3_001927-T1.exon3KJC3_001927-T1.exon3Aspergillus niger KJC3exon
KJC3_001927-T1.exon2KJC3_001927-T1.exon2Aspergillus niger KJC3exon
KJC3_001927-T1.exon1KJC3_001927-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001927-T1.utr5p1KJC3_001927-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263R62
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR013105
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefPFAM:PF07719
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1095480..1097318 -
Powered by Drupal