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KJC3_001931-T1, KJC3_001931-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001931-T1
Unique NameKJC3_001931-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1192080..1193884+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001931-T1 ID=KJC3_001931-T1|Name=KJC3_001931-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1805bp|location=Sequence derived from alignment at ch2:1192080..1193884+ (Aspergillus niger KJC3)
ATGGGCCAATTTCAGTCTTCGACAAGCGAAGAGAACGCCAGCTCTTCCGC
TAGATCATCCGATAAGAAACTTGATTATTACGAACTTTTACAGGTGAATT
GGGACGCATCTGCAGAGGAGTAAGCTTGCCTTGCCTTTCGGTTTTCCTAA
ATCTTGCGCATGAATTTTTTCTTGGGAATAGGGCACGCAGAATGGGGAAG
GGAATATGAAAGCGGGCCTCGAAGGGGAGACTTGGTGGGATGAGCAGCAA
AGGTATCCTGAAGCCACTAACACCCCATACTCCCTTTAGAATTAAAAAGG
CGTACAGAAGAAAAGCCCTTGAGTTGCACCCGGACCGAAACTATGGAAAT
GTGGAATCTGCTACAAAGCTTTTTGCAGAGATTCAGTCTGCTTACGAAGT
GCTTTCAGACCCTCAGGAGCGTTCGTGGTACGATACCCATCGAGATGTCT
TGTTAGGAAGCCAGGGCAGTTCTGGCAACTCGGGAACTCCATATAGTTCG
CGCACGACTACTGCAGACGATGTCTATAGGATCTTTTCTAGGTTCAGTCC
ACAAATGGAATTTTCAGATGCCTCGGATGGCTTCTACGGTGGTCTTCGTG
AGGCCTTCTCACGACTTGCCATGGAGGAAGAGATCGCTTGCCGTGGGGAA
AATATGGAATTTATTGCCTATCCTACGTTCGGGTGCCGGGGAGACGATTT
TGAAAAGGTTGTACGCCCATTTTACGTTGCATGGGGCGGCTTCTCAACAA
AGAAGTCTTTTGCATGGAAAGATGTCTATCGTTACTCAGAAGCTCCAGAC
CGTCGTGTTCGTAGACTGATGGAGAAGGAAAATAAGCGTCTGAGGGACGA
AGGCATCCGTGAATTCAACGATGCAGTTCGATCACTCGTAGCTTTCGTCA
AAAAGCGCGACCCGCGATACAAGACAAGCACTCAAAGTGAATCACAGCGC
CAGGAATTCCTCCGACAATCTGCTGCCTCCCAAGCTGCCAAATCACGGGC
TGCGAACCAAGCTAGGCTGCGAGACCATGTTACGCAAGACTGGGCAAAGT
CAGAGGAATTTGAAGATGACGAGACAGTGAGTACCGAGACAGAACTGGAA
TTTTTCGAATGTGTTGTGTGCCGCAAAAGTTTCAAGAGTTTGAATCAGTT
TGAGGCACACGAACGAAGCAAAAAGCATGTCAAAGCTATTAGGCAGCTTC
AAAAGGAAATGAGGAATGAAAACAAGCAACTAGGACTAGCGGGAGATTCA
TCAGAGTATGAAGCCCAGACTGCCATGACATTCATCCCCGATTATCAGGC
TATGCCTGTATCGGACGCCGAAAGCACACCATGCAGATCCACGTCGGGAA
ACACTCTCCCCGGCAATAATGATAATGAGGGTCGCATACCGGCACCGGAA
ATTGCCGGTGAGATCCACAGTGAACGCGTATCTCACGAAAGCCTACGGGG
CTATGTCGATCAAACCTCAGAAAGTGAAATTGACTATGCTTCAAGAGAAG
TTGTCGAAGGTCGACTCCAACTGACCGGTGATTCAACACAGGATACGACA
AATGCGGCGGCTAGTCTGTCTTCGGATTTTACGCATCTAGAGCTTGATCC
CTCCAAGCCAGCCGTTCAGAAGTTGGGCAAGGCTAAACAAAAGCGCATAA
AAAAAGCTGAACAGGCAAAAGGACAGTCCTTAGGCCCGCGGTGTACAACA
TGCAACGCTTCCTTTCCTTCACGGACCCAGCTTTTTTCACATCTTAAAGA
GTCCGATCACGCACAGGTTCAGGAGGTCACTCGGCATAGAAAGAGAAGAG
CTTAA
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Coding sequence (CDS) from alignment at ch2:1192080..1193884+

>KJC3_001931-T1 ID=KJC3_001931-T1|Name=KJC3_001931-T1|organism=Aspergillus niger KJC3|type=CDS|length=3270bp|location=Sequence derived from alignment at ch2:1192080..1193884+ (Aspergillus niger KJC3)
ATGGGCCAATTTCAGTCTTCGACAAGCGAAGAGAACGCCAGCTCTTCCGC
TAGATCATCCGATAAGAAACTTGATTATTACGAACTTTTACAGGTGAATT
GGGACGCATCTGCAGAGGAAATTAAAAAGGCGTACAGAAGAAAAGCCCTT
GAGTTGCACCCGGACCGAAACTATGGAAATGTGGAATCTGCTACAAAGCT
TTTTGCAGAGATTCAGTCTGCTTACGAAGTGCTTTCAGACCCTCAGGAGC
GTTCGTGGTACGATACCCATCGAGATGTCTTGTTAGGAAGCCAGGGCAGT
TCTGGCAACTCGGGAACTCCATATAGTTCGCGCACGACTACTGCAGACGA
TGTCTATAGGATCTTTTCTAGGTTCAGTCCACAAATGGAATTTTCAGATG
CCTCGGATGGCTTCTACGGTGGTCTTCGTGAGGCCTTCTCACGACTTGCC
ATGGAGGAAGAGATCGCTTGCCGTGGGGAAAATATGGAATTTATTGCCTA
TCCTACGTTCGGGTGCCGGGGAGACGATTTTGAAAAGGTTGTACGCCCAT
TTTACGTTGCATGGGGCGGCTTCTCAACAAAGAAGTCTTTTGCATGGAAA
GATGTCTATCGTTACTCAGAAGCTCCAGACCGTCGTGTTCGTAGACTGAT
GGAGAAGGAAAATAAGCGTCTGAGGGACGAAGGCATCCGTGAATTCAACG
ATGCAGTTCGATCACTCGTAGCTTTCGTCAAAAAGCGCGACCCGCGATAC
AAGACAAGCACTCAAAGTGAATCACAGCGCCAGGAATTCCTCCGACAATC
TGCTGCCTCCCAAGCTGCCAAATCACGGGCTGCGAACCAAGCTAGGCTGC
GAGACCATGTTACGCAAGACTGGGCAAAGTCAGAGGAATTTGAAGATGAC
GAGACAGTGAGTACCGAGACAGAACTGGAATTTTTCGAATGTGTTGTGTG
CCGCAAAAGTTTCAAGAGTTTGAATCAGTTTGAGGCACACGAACGAAGCA
AAAAGCATGTCAAAGCTATTAGGCAGCTTCAAAAGGAAATGAGGAATGAA
AACAAGCAACTAGGACTAGCGGGAGATTCATCAGAGTATGAAGCCCAGAC
TGCCATGACATTCATCCCCGATTATCAGGCTATGCCTGTATCGGACGCCG
AAAGCACACCATGCAGATCCACGTCGGGAAACACTCTCCCCGGCAATAAT
GATAATGAGGGTCGCATACCGGCACCGGAAATTGCCGGTGAGATCCACAG
TGAACGCGTATCTCACGAAAGCCTACGGGGCTATGTCGATCAAACCTCAG
AAAGTGAAATTGACTATGCTTCAAGAGAAGTTGTCGAAGGTCGACTCCAA
CTGACCGGTGATTCAACACAGGATACGACAAATGCGGCGGCTAGTCTGTC
TTCGGATTTTACGCATCTAGAGCTTGATCCCTCCAAGCCAGCCGTTCAGA
AGTTGGGCAAGGCTAAACAAAAGCGCATAAAAAAAGCTGAACAGGCAAAA
GGACAGTCCTTAGGCCCGCGGTGTACAACATGCAACGCTTCCTTTCCTTC
ACGGACCCAGCTTTTTTCACATCTTAAAGAGTCCGATCACGCACAGGTTC
AGGAGGTCACTCGGCATAGAAAGAGAAGAGCTTAAATGGGCCAATTTCAG
TCTTCGACAAGCGAAGAGAACGCCAGCTCTTCCGCTAGATCATCCGATAA
GAAACTTGATTATTACGAACTTTTACAGGTGAATTGGGACGCATCTGCAG
AGGAAATTAAAAAGGCGTACAGAAGAAAAGCCCTTGAGTTGCACCCGGAC
CGAAACTATGGAAATGTGGAATCTGCTACAAAGCTTTTTGCAGAGATTCA
GTCTGCTTACGAAGTGCTTTCAGACCCTCAGGAGCGTTCGTGGTACGATA
CCCATCGAGATGTCTTGTTAGGAAGCCAGGGCAGTTCTGGCAACTCGGGA
ACTCCATATAGTTCGCGCACGACTACTGCAGACGATGTCTATAGGATCTT
TTCTAGGTTCAGTCCACAAATGGAATTTTCAGATGCCTCGGATGGCTTCT
ACGGTGGTCTTCGTGAGGCCTTCTCACGACTTGCCATGGAGGAAGAGATC
GCTTGCCGTGGGGAAAATATGGAATTTATTGCCTATCCTACGTTCGGGTG
CCGGGGAGACGATTTTGAAAAGGTTGTACGCCCATTTTACGTTGCATGGG
GCGGCTTCTCAACAAAGAAGTCTTTTGCATGGAAAGATGTCTATCGTTAC
TCAGAAGCTCCAGACCGTCGTGTTCGTAGACTGATGGAGAAGGAAAATAA
GCGTCTGAGGGACGAAGGCATCCGTGAATTCAACGATGCAGTTCGATCAC
TCGTAGCTTTCGTCAAAAAGCGCGACCCGCGATACAAGACAAGCACTCAA
AGTGAATCACAGCGCCAGGAATTCCTCCGACAATCTGCTGCCTCCCAAGC
TGCCAAATCACGGGCTGCGAACCAAGCTAGGCTGCGAGACCATGTTACGC
AAGACTGGGCAAAGTCAGAGGAATTTGAAGATGACGAGACAGTGAGTACC
GAGACAGAACTGGAATTTTTCGAATGTGTTGTGTGCCGCAAAAGTTTCAA
GAGTTTGAATCAGTTTGAGGCACACGAACGAAGCAAAAAGCATGTCAAAG
CTATTAGGCAGCTTCAAAAGGAAATGAGGAATGAAAACAAGCAACTAGGA
CTAGCGGGAGATTCATCAGAGTATGAAGCCCAGACTGCCATGACATTCAT
CCCCGATTATCAGGCTATGCCTGTATCGGACGCCGAAAGCACACCATGCA
GATCCACGTCGGGAAACACTCTCCCCGGCAATAATGATAATGAGGGTCGC
ATACCGGCACCGGAAATTGCCGGTGAGATCCACAGTGAACGCGTATCTCA
CGAAAGCCTACGGGGCTATGTCGATCAAACCTCAGAAAGTGAAATTGACT
ATGCTTCAAGAGAAGTTGTCGAAGGTCGACTCCAACTGACCGGTGATTCA
ACACAGGATACGACAAATGCGGCGGCTAGTCTGTCTTCGGATTTTACGCA
TCTAGAGCTTGATCCCTCCAAGCCAGCCGTTCAGAAGTTGGGCAAGGCTA
AACAAAAGCGCATAAAAAAAGCTGAACAGGCAAAAGGACAGTCCTTAGGC
CCGCGGTGTACAACATGCAACGCTTCCTTTCCTTCACGGACCCAGCTTTT
TTCACATCTTAAAGAGTCCGATCACGCACAGGTTCAGGAGGTCACTCGGC
ATAGAAAGAGAAGAGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001931KJC3_001931Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001931-T1.exon1KJC3_001931-T1.exon1Aspergillus niger KJC3exon
KJC3_001931-T1.exon2KJC3_001931-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001931-T1.cdsKJC3_001931-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001931-T1KJC3_001931-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR018253
DBxrefInterPro:IPR022755
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR003604
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR001623
DBxrefPFAM:PF12874
DBxrefPFAM:PF12171
DBxrefPFAM:PF00226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1192080..1193884 +
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