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KJC3_001933-T1, KJC3_001933-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001933-T1
Unique NameKJC3_001933-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1197038..1198578+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001933-T1 ID=KJC3_001933-T1|Name=KJC3_001933-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1541bp|location=Sequence derived from alignment at ch2:1197038..1198578+ (Aspergillus niger KJC3)
ACGTACTACAACACCACACCCTACCATCTTCATCCGTGCGACCAGGGAAG
TGCAACTTAGAGTATCGCAACGATAGCAGACATGAACACAGTTGACATAG
GACGATGCAGCAAACGCATCGTACAGTATCTCTGGGATCCAGAACCCAGG
AATGATGAAGATCCTAATTCTTCAATATGGTGCCTAGGGATAGAGTATCA
TCCCGACAAGGATGCCAACACAAGAGAGACACGTAAGCCCAAGCAAAATT
ATAACCAACCCATGCCTTTTTAAAAGACACATTTGTTCCAAATGTCACTG
ATACCGGTGCCAGCCGACAAGAACAACACCCGAGAGAACGTGATGGGAAC
GACCAACTATCGGAAACCATCAGAACATGCGTGGCCTGAGTCGTTCCTGT
TGGATTTCGAATCAAGAATCTGGATGACCTATCGGTCCAATTTCCCCCCT
ATACCTAGAGTCGAGGGAGACGACAAAAGTGCATCAATGACACTGGGGGT
ACGCCTAAGAAGCCAATTAGTAGATACGCAAGGATTCACATCCGATACTG
GCTGGGGCTGTATGATACGATCCGGTCAGAGCCTGCTGGCAAATGCACTA
TCTATGTTGGTCCTAGGACGTGGTACTATCATTCACGCGCGTGGCCTGAA
TGCACTGCTAACATTTGACCAGACTGGCGCCGTGGAGCAAGGTTTGAGGA
AGAATCACAGCTACTGTCTCTTTTTGCCGACACGCCAACTGCCCCCTTCT
CTGTACATCGGTTCGTAAAACATGGTGCCGAATCGTGCGGGAAGTACCCT
GGGGAATGGTTTGGGCCCTCCGCAACCGCCAAGTGCATAGAGTAAGCTCC
ACATTACACCTAGCAACTATTATAAAAAGGTGAACTGAACAATAAAACAG
AGCACTTTCGTCCCAGTGTGGAAATCCCACACTGAAAGTATATGTCTCGA
ATGATACATCGGAAGTTTACCAGGACAAATTCATGGATATCGCCCGAAAC
ACATCCGGTGCTTTTCAGCCTACCCTGATACTTCTAGGGACAAGGCTCGG
CATTGACAACATCACCCCAGTCTATTGGGATGGTCTAAAAGCAGCGTTGC
AGTTCCCTCAATCAGTCGGAATTGCAGGGTATATTGCCCACCCATGAGCC
ATTCCTCACCATTAAAGCTGACGTCATCACTAGGGGACGCCCGTCGGCGT
CACACTACTTTGTCGGAGCCCAGGGGTCGCATCTATTCTATCTAGATCCA
CATTATACCCGCCCTGCGCTTCCAGATCGTCAAGAAGGCGAACTATACTC
AAAGGAGGAGGTTGATACTTATCATACACGGCGCTTGAGGAGGATTCACG
TGCGGGACATGGATCCGAGCATGCTTATAGGCTTCCTCATTCGAAACCAG
GAAGATTGGGCCGACTGGTTAAAGCGCATAGAAGCCGTCAAGGGACGGCC
GATTATCCATGTACTCAAGCAAATGAATCCTGACCACGACCAGGAAGCGG
GAGCACTTGACCAGGTTGAAGCACTGGATGATATCGAATAG
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Coding sequence (CDS) from alignment at ch2:1197038..1198578+

>KJC3_001933-T1 ID=KJC3_001933-T1|Name=KJC3_001933-T1|organism=Aspergillus niger KJC3|type=CDS|length=6075bp|location=Sequence derived from alignment at ch2:1197038..1198578+ (Aspergillus niger KJC3)
ATGAACACAGTTGACATAGGACGATGCAGCAAACGCATCGTACAGTATCT
CTGGGATCCAGAACCCAGGAATGATGAAGATCCTAATTCTTCAATATGGT
GCCTAGGGATAGAGTATCATCCCGACAAGGATGCCAACACAAGAGAGACA
CCCGACAAGAACAACACCCGAGAGAACGTGATGGGAACGACCAACTATCG
GAAACCATCAGAACATGCGTGGCCTGAGTCGTTCCTGTTGGATTTCGAAT
CAAGAATCTGGATGACCTATCGGTCCAATTTCCCCCCTATACCTAGAGTC
GAGGGAGACGACAAAAGTGCATCAATGACACTGGGGGTACGCCTAAGAAG
CCAATTAGTAGATACGCAAGGATTCACATCCGATACTGGCTGGGGCTGTA
TGATACGATCCGGTCAGAGCCTGCTGGCAAATGCACTATCTATGTTGGTC
CTAGGACGTGACTGGCGCCGTGGAGCAAGGTTTGAGGAAGAATCACAGCT
ACTGTCTCTTTTTGCCGACACGCCAACTGCCCCCTTCTCTGTACATCGGT
TCGTAAAACATGGTGCCGAATCGTGCGGGAAGTACCCTGGGGAATGGTTT
GGGCCCTCCGCAACCGCCAAGTGCATAGAAGCACTTTCGTCCCAGTGTGG
AAATCCCACACTGAAAGTATATGTCTCGAATGATACATCGGAAGTTTACC
AGGACAAATTCATGGATATCGCCCGAAACACATCCGGTGCTTTTCAGCCT
ACCCTGATACTTCTAGGGACAAGGCTCGGCATTGACAACATCACCCCAGT
CTATTGGGATGGTCTAAAAGCAGCGTTGCAGTTCCCTCAATCAGTCGGAA
TTGCAGGGGGACGCCCGTCGGCGTCACACTACTTTGTCGGAGCCCAGGGG
TCGCATCTATTCTATCTAGATCCACATTATACCCGCCCTGCGCTTCCAGA
TCGTCAAGAAGGCGAACTATACTCAAAGGAGGAGGTTGATACTTATCATA
CACGGCGCTTGAGGAGGATTCACGTGCGGGACATGGATCCGAGCATGCTT
ATAGGCTTCCTCATTCGAAACCAGGAAGATTGGGCCGACTGGTTAAAGCG
CATAGAAGCCGTCAAGGGACGGCCGATTATCCATGTACTCAAGCAAATGA
ATCCTGACCACGACCAGGAAGCGGGAGCACTTGACCAGGTTGAAGCACTG
GATGATATCGAATAGATGAACACAGTTGACATAGGACGATGCAGCAAACG
CATCGTACAGTATCTCTGGGATCCAGAACCCAGGAATGATGAAGATCCTA
ATTCTTCAATATGGTGCCTAGGGATAGAGTATCATCCCGACAAGGATGCC
AACACAAGAGAGACACCCGACAAGAACAACACCCGAGAGAACGTGATGGG
AACGACCAACTATCGGAAACCATCAGAACATGCGTGGCCTGAGTCGTTCC
TGTTGGATTTCGAATCAAGAATCTGGATGACCTATCGGTCCAATTTCCCC
CCTATACCTAGAGTCGAGGGAGACGACAAAAGTGCATCAATGACACTGGG
GGTACGCCTAAGAAGCCAATTAGTAGATACGCAAGGATTCACATCCGATA
CTGGCTGGGGCTGTATGATACGATCCGGTCAGAGCCTGCTGGCAAATGCA
CTATCTATGTTGGTCCTAGGACGTGACTGGCGCCGTGGAGCAAGGTTTGA
GGAAGAATCACAGCTACTGTCTCTTTTTGCCGACACGCCAACTGCCCCCT
TCTCTGTACATCGGTTCGTAAAACATGGTGCCGAATCGTGCGGGAAGTAC
CCTGGGGAATGGTTTGGGCCCTCCGCAACCGCCAAGTGCATAGAAGCACT
TTCGTCCCAGTGTGGAAATCCCACACTGAAAGTATATGTCTCGAATGATA
CATCGGAAGTTTACCAGGACAAATTCATGGATATCGCCCGAAACACATCC
GGTGCTTTTCAGCCTACCCTGATACTTCTAGGGACAAGGCTCGGCATTGA
CAACATCACCCCAGTCTATTGGGATGGTCTAAAAGCAGCGTTGCAGTTCC
CTCAATCAGTCGGAATTGCAGGGGGACGCCCGTCGGCGTCACACTACTTT
GTCGGAGCCCAGGGGTCGCATCTATTCTATCTAGATCCACATTATACCCG
CCCTGCGCTTCCAGATCGTCAAGAAGGCGAACTATACTCAAAGGAGGAGG
TTGATACTTATCATACACGGCGCTTGAGGAGGATTCACGTGCGGGACATG
GATCCGAGCATGCTTATAGGCTTCCTCATTCGAAACCAGGAAGATTGGGC
CGACTGGTTAAAGCGCATAGAAGCCGTCAAGGGACGGCCGATTATCCATG
TACTCAAGCAAATGAATCCTGACCACGACCAGGAAGCGGGAGCACTTGAC
CAGGTTGAAGCACTGGATGATATCGAATAGATGAACACAGTTGACATAGG
ACGATGCAGCAAACGCATCGTACAGTATCTCTGGGATCCAGAACCCAGGA
ATGATGAAGATCCTAATTCTTCAATATGGTGCCTAGGGATAGAGTATCAT
CCCGACAAGGATGCCAACACAAGAGAGACACCCGACAAGAACAACACCCG
AGAGAACGTGATGGGAACGACCAACTATCGGAAACCATCAGAACATGCGT
GGCCTGAGTCGTTCCTGTTGGATTTCGAATCAAGAATCTGGATGACCTAT
CGGTCCAATTTCCCCCCTATACCTAGAGTCGAGGGAGACGACAAAAGTGC
ATCAATGACACTGGGGGTACGCCTAAGAAGCCAATTAGTAGATACGCAAG
GATTCACATCCGATACTGGCTGGGGCTGTATGATACGATCCGGTCAGAGC
CTGCTGGCAAATGCACTATCTATGTTGGTCCTAGGACGTGACTGGCGCCG
TGGAGCAAGGTTTGAGGAAGAATCACAGCTACTGTCTCTTTTTGCCGACA
CGCCAACTGCCCCCTTCTCTGTACATCGGTTCGTAAAACATGGTGCCGAA
TCGTGCGGGAAGTACCCTGGGGAATGGTTTGGGCCCTCCGCAACCGCCAA
GTGCATAGAAGCACTTTCGTCCCAGTGTGGAAATCCCACACTGAAAGTAT
ATGTCTCGAATGATACATCGGAAGTTTACCAGGACAAATTCATGGATATC
GCCCGAAACACATCCGGTGCTTTTCAGCCTACCCTGATACTTCTAGGGAC
AAGGCTCGGCATTGACAACATCACCCCAGTCTATTGGGATGGTCTAAAAG
CAGCGTTGCAGTTCCCTCAATCAGTCGGAATTGCAGGGGGACGCCCGTCG
GCGTCACACTACTTTGTCGGAGCCCAGGGGTCGCATCTATTCTATCTAGA
TCCACATTATACCCGCCCTGCGCTTCCAGATCGTCAAGAAGGCGAACTAT
ACTCAAAGGAGGAGGTTGATACTTATCATACACGGCGCTTGAGGAGGATT
CACGTGCGGGACATGGATCCGAGCATGCTTATAGGCTTCCTCATTCGAAA
CCAGGAAGATTGGGCCGACTGGTTAAAGCGCATAGAAGCCGTCAAGGGAC
GGCCGATTATCCATGTACTCAAGCAAATGAATCCTGACCACGACCAGGAA
GCGGGAGCACTTGACCAGGTTGAAGCACTGGATGATATCGAATAGATGAA
CACAGTTGACATAGGACGATGCAGCAAACGCATCGTACAGTATCTCTGGG
ATCCAGAACCCAGGAATGATGAAGATCCTAATTCTTCAATATGGTGCCTA
GGGATAGAGTATCATCCCGACAAGGATGCCAACACAAGAGAGACACCCGA
CAAGAACAACACCCGAGAGAACGTGATGGGAACGACCAACTATCGGAAAC
CATCAGAACATGCGTGGCCTGAGTCGTTCCTGTTGGATTTCGAATCAAGA
ATCTGGATGACCTATCGGTCCAATTTCCCCCCTATACCTAGAGTCGAGGG
AGACGACAAAAGTGCATCAATGACACTGGGGGTACGCCTAAGAAGCCAAT
TAGTAGATACGCAAGGATTCACATCCGATACTGGCTGGGGCTGTATGATA
CGATCCGGTCAGAGCCTGCTGGCAAATGCACTATCTATGTTGGTCCTAGG
ACGTGACTGGCGCCGTGGAGCAAGGTTTGAGGAAGAATCACAGCTACTGT
CTCTTTTTGCCGACACGCCAACTGCCCCCTTCTCTGTACATCGGTTCGTA
AAACATGGTGCCGAATCGTGCGGGAAGTACCCTGGGGAATGGTTTGGGCC
CTCCGCAACCGCCAAGTGCATAGAAGCACTTTCGTCCCAGTGTGGAAATC
CCACACTGAAAGTATATGTCTCGAATGATACATCGGAAGTTTACCAGGAC
AAATTCATGGATATCGCCCGAAACACATCCGGTGCTTTTCAGCCTACCCT
GATACTTCTAGGGACAAGGCTCGGCATTGACAACATCACCCCAGTCTATT
GGGATGGTCTAAAAGCAGCGTTGCAGTTCCCTCAATCAGTCGGAATTGCA
GGGGGACGCCCGTCGGCGTCACACTACTTTGTCGGAGCCCAGGGGTCGCA
TCTATTCTATCTAGATCCACATTATACCCGCCCTGCGCTTCCAGATCGTC
AAGAAGGCGAACTATACTCAAAGGAGGAGGTTGATACTTATCATACACGG
CGCTTGAGGAGGATTCACGTGCGGGACATGGATCCGAGCATGCTTATAGG
CTTCCTCATTCGAAACCAGGAAGATTGGGCCGACTGGTTAAAGCGCATAG
AAGCCGTCAAGGGACGGCCGATTATCCATGTACTCAAGCAAATGAATCCT
GACCACGACCAGGAAGCGGGAGCACTTGACCAGGTTGAAGCACTGGATGA
TATCGAATAGATGAACACAGTTGACATAGGACGATGCAGCAAACGCATCG
TACAGTATCTCTGGGATCCAGAACCCAGGAATGATGAAGATCCTAATTCT
TCAATATGGTGCCTAGGGATAGAGTATCATCCCGACAAGGATGCCAACAC
AAGAGAGACACCCGACAAGAACAACACCCGAGAGAACGTGATGGGAACGA
CCAACTATCGGAAACCATCAGAACATGCGTGGCCTGAGTCGTTCCTGTTG
GATTTCGAATCAAGAATCTGGATGACCTATCGGTCCAATTTCCCCCCTAT
ACCTAGAGTCGAGGGAGACGACAAAAGTGCATCAATGACACTGGGGGTAC
GCCTAAGAAGCCAATTAGTAGATACGCAAGGATTCACATCCGATACTGGC
TGGGGCTGTATGATACGATCCGGTCAGAGCCTGCTGGCAAATGCACTATC
TATGTTGGTCCTAGGACGTGACTGGCGCCGTGGAGCAAGGTTTGAGGAAG
AATCACAGCTACTGTCTCTTTTTGCCGACACGCCAACTGCCCCCTTCTCT
GTACATCGGTTCGTAAAACATGGTGCCGAATCGTGCGGGAAGTACCCTGG
GGAATGGTTTGGGCCCTCCGCAACCGCCAAGTGCATAGAAGCACTTTCGT
CCCAGTGTGGAAATCCCACACTGAAAGTATATGTCTCGAATGATACATCG
GAAGTTTACCAGGACAAATTCATGGATATCGCCCGAAACACATCCGGTGC
TTTTCAGCCTACCCTGATACTTCTAGGGACAAGGCTCGGCATTGACAACA
TCACCCCAGTCTATTGGGATGGTCTAAAAGCAGCGTTGCAGTTCCCTCAA
TCAGTCGGAATTGCAGGGGGACGCCCGTCGGCGTCACACTACTTTGTCGG
AGCCCAGGGGTCGCATCTATTCTATCTAGATCCACATTATACCCGCCCTG
CGCTTCCAGATCGTCAAGAAGGCGAACTATACTCAAAGGAGGAGGTTGAT
ACTTATCATACACGGCGCTTGAGGAGGATTCACGTGCGGGACATGGATCC
GAGCATGCTTATAGGCTTCCTCATTCGAAACCAGGAAGATTGGGCCGACT
GGTTAAAGCGCATAGAAGCCGTCAAGGGACGGCCGATTATCCATGTACTC
AAGCAAATGAATCCTGACCACGACCAGGAAGCGGGAGCACTTGACCAGGT
TGAAGCACTGGATGATATCGAATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG4KJC3_001933Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001933-T1KJC3_001933-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001933-T1.utr5p1KJC3_001933-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001933-T1.exon1KJC3_001933-T1.exon1Aspergillus niger KJC3exon
KJC3_001933-T1.exon2KJC3_001933-T1.exon2Aspergillus niger KJC3exon
KJC3_001933-T1.exon3KJC3_001933-T1.exon3Aspergillus niger KJC3exon
KJC3_001933-T1.exon4KJC3_001933-T1.exon4Aspergillus niger KJC3exon
KJC3_001933-T1.exon5KJC3_001933-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001933-T1.cdsKJC3_001933-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
NoteBUSCO:EOG09264B3O
NoteMEROPS:MER0013559
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR005078
DBxrefPFAM:PF03416
ProductCysteine protease atg4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1197038..1198578 +
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