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KJC3_001936-T1, KJC3_001936-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001936-T1
Unique NameKJC3_001936-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1201107..1201642-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001936-T1 ID=KJC3_001936-T1|Name=KJC3_001936-T1|organism=Aspergillus niger KJC3|type=mRNA|length=536bp|location=Sequence derived from alignment at ch2:1201107..1201642- (Aspergillus niger KJC3)
ATGCCTCTCAACGCTGGCGCGTAGGTTGACCGAAGGAAGAGCGAATAGAA
GATATCCTGACTTTGTTGTCCAGTTCACTTTATCGACGGTCCCTGAAATT
GGCTCTTGATTGGGCCGTCCACCGCCATATCTGGAGAGGACAAGCCGTGT
ATATTCGCTCACTTTTTGAGGCCAACAAAGATGTTCGCGATCCCCGTCAG
CAAAAGGCAAGTGCTGCTTCCTATCGCATTGAATAACTAGAGTTCGAAGA
ACTGACGGTGAAACGGAAAGGTATTGCTGCAAGAGACAGAAAAGCTTCTA
GAGACATGGAAACACCCTGACCCTTACCGCGCGCCTACGGCCCCGGGTGG
TGAGTTGAACAGAGTGTGCTTTATGAATCGAAAGATCAGGATCTGACATT
TCTTCAGGCAGCAAATACGAGAGAAACATCCCTGCCCCTCAATTGCCTCG
TGAGTGAACCAATGATGATCTGCTGAAAGTATAGATTATTGACGCGGAGA
TATCTGCTAGTTGCCTCGGACAGCTCGACACACTGA
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Coding sequence (CDS) from alignment at ch2:1201107..1201642-

>KJC3_001936-T1 ID=KJC3_001936-T1|Name=KJC3_001936-T1|organism=Aspergillus niger KJC3|type=CDS|length=1500bp|location=Sequence derived from alignment at ch2:1201107..1201642- (Aspergillus niger KJC3)
TTGCCTCGGACAGCTCGACACACTGAGCAGCAAATACGAGAGAAACATCC
CTGCCCCTCAATTGCCTCGTATTGCTGCAAGAGACAGAAAAGCTTCTAGA
GACATGGAAACACCCTGACCCTTACCGCGCGCCTACGGCCCCGGGTGTTC
ACTTTATCGACGGTCCCTGAAATTGGCTCTTGATTGGGCCGTCCACCGCC
ATATCTGGAGAGGACAAGCCGTGTATATTCGCTCACTTTTTGAGGCCAAC
AAAGATGTTCGCGATCCCCGTCAGCAAAAGATGCCTCTCAACGCTGGCGC
TTGCCTCGGACAGCTCGACACACTGAGCAGCAAATACGAGAGAAACATCC
CTGCCCCTCAATTGCCTCGTATTGCTGCAAGAGACAGAAAAGCTTCTAGA
GACATGGAAACACCCTGACCCTTACCGCGCGCCTACGGCCCCGGGTGTTC
ACTTTATCGACGGTCCCTGAAATTGGCTCTTGATTGGGCCGTCCACCGCC
ATATCTGGAGAGGACAAGCCGTGTATATTCGCTCACTTTTTGAGGCCAAC
AAAGATGTTCGCGATCCCCGTCAGCAAAAGATGCCTCTCAACGCTGGCGC
TTGCCTCGGACAGCTCGACACACTGAGCAGCAAATACGAGAGAAACATCC
CTGCCCCTCAATTGCCTCGTATTGCTGCAAGAGACAGAAAAGCTTCTAGA
GACATGGAAACACCCTGACCCTTACCGCGCGCCTACGGCCCCGGGTGTTC
ACTTTATCGACGGTCCCTGAAATTGGCTCTTGATTGGGCCGTCCACCGCC
ATATCTGGAGAGGACAAGCCGTGTATATTCGCTCACTTTTTGAGGCCAAC
AAAGATGTTCGCGATCCCCGTCAGCAAAAGATGCCTCTCAACGCTGGCGC
TTGCCTCGGACAGCTCGACACACTGAGCAGCAAATACGAGAGAAACATCC
CTGCCCCTCAATTGCCTCGTATTGCTGCAAGAGACAGAAAAGCTTCTAGA
GACATGGAAACACCCTGACCCTTACCGCGCGCCTACGGCCCCGGGTGTTC
ACTTTATCGACGGTCCCTGAAATTGGCTCTTGATTGGGCCGTCCACCGCC
ATATCTGGAGAGGACAAGCCGTGTATATTCGCTCACTTTTTGAGGCCAAC
AAAGATGTTCGCGATCCCCGTCAGCAAAAGATGCCTCTCAACGCTGGCGC
TTGCCTCGGACAGCTCGACACACTGAGCAGCAAATACGAGAGAAACATCC
CTGCCCCTCAATTGCCTCGTATTGCTGCAAGAGACAGAAAAGCTTCTAGA
GACATGGAAACACCCTGACCCTTACCGCGCGCCTACGGCCCCGGGTGTTC
ACTTTATCGACGGTCCCTGAAATTGGCTCTTGATTGGGCCGTCCACCGCC
ATATCTGGAGAGGACAAGCCGTGTATATTCGCTCACTTTTTGAGGCCAAC
AAAGATGTTCGCGATCCCCGTCAGCAAAAGATGCCTCTCAACGCTGGCGC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001936KJC3_001936Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001936-T1KJC3_001936-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001936-T1.cdsKJC3_001936-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001936-T1.exon5KJC3_001936-T1.exon5Aspergillus niger KJC3exon
KJC3_001936-T1.exon4KJC3_001936-T1.exon4Aspergillus niger KJC3exon
KJC3_001936-T1.exon3KJC3_001936-T1.exon3Aspergillus niger KJC3exon
KJC3_001936-T1.exon2KJC3_001936-T1.exon2Aspergillus niger KJC3exon
KJC3_001936-T1.exon1KJC3_001936-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR008011
DBxrefPFAM:PF05347
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1201107..1201642 -
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