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KJC3_001941-T1, KJC3_001941-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001941-T1
Unique NameKJC3_001941-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1209743..1211154+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001941-T1 ID=KJC3_001941-T1|Name=KJC3_001941-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1412bp|location=Sequence derived from alignment at ch2:1209743..1211154+ (Aspergillus niger KJC3)
ATGTTCAACGCGCCGTGGATATGCGCTCGATGTTTCGTGCGGTCTGCTGC
TAGGATTGGCTCCAATCCGCGTCTGTTTCTACAACATCGCGGTCTAAAGA
CTGGTCTGCTATACCTCCTTCATATCTATTTCTGTTTCACCGTCTAGGAA
GGAACTGACGTGGTCCGAGGCAGATTCCTCAGGCCTTTCACAAGCCCTAT
TAGCACGCGCTCGTTCTTTGACCAGTGAACATTCCACACTCTCCGCCCAT
TTGGCTGAGGTATTTGATGCGAAACTCGCCAAGCGAGTGGGTGAACTCGC
ACCAATTGCGAGTACCTTGAAAGAGTGGGAACACGCAAATAGTGTATGTA
TTTCTCCAATGTATTCCTGTATTCAGCTCTATTGACATTTTGCAGTCTAT
ATCGGAACTTTTGTCCCTGCTTGATGACCCAGAAACCGATGCTGAGCTGA
GGTCGCTTGCAGTTGAAGACCTGGAGAGCAGCAAGATCGCGCTGCCTGCC
ATAGCGGATAATTTAAAGAAGGCTCTTATACCTCGCCACCCTTTCGCAGA
CCTCCCATGCTTGCTCGAAATACGCCCCGGCGCAGGTGGGGACGAGGCTG
GCCTTTTTGCTTTCGAGGTATTGAGAATGTATATCGCCTTCTGTTCACGT
CGTGGTTTCAGGTATAGCATCATAAAACAGGATGTTGCAGACGGCCCTGC
GCAAGACCGATTGAGTGAAGCGGTCCTGGAAGTTGACGCGGATGGGGCCT
ATGACATCCTGAGAACAGAGTCGGGAGTTCATAGAGTACAGAGGGTTCCC
GCTACCGAGGCCAAGGGCCGCACACATACCAGTGCCGTTAGTGTGATGAT
ACTTCCTAGTTTTCCAGACTCCGGGAGTGGCCTTGATAGTTCACTCAATT
TTGAGGACCCAAACAGTGACTACTATGTGGATCCTCAAGAGGTTCGCACA
GAGAAGATGCGAGCCGGTGGCGCAGGCGGTCAGCATGTCAATAAAACCGA
GTCAGCTATTCGGTTGACCCATATACCAACGGGTACCGTTGTCTCTATGC
AAGATTCACGTTCCCAACATGCCAATCGGAAGAAGGCTTGGCAGGTTTTG
CGGGCGAGATTAGCTGAAGCAAGACGAGAAGCCCGAGAACAGGAATTGGT
TAACCTAAGGAGAGGAGCAATGGGCGGTGTTGCTCGAATGGGACGCGGTG
ACAAGATCCGAACTTACAATTACGGTCAGAATCGCTGCACAGACCATCGC
AGCGGCCTCACCATACATAACCTGGATAGTGTTCTTGATGGTGGTGAAGG
CCTAGAAACCGTAATGGATAGCGTACGGACATGGCTCGTCGAGCGCGAAA
TAGAGGCCATGGCTGCTGAAGAATCAGTCCAAGACAAAGAAGGGCTGCGT
GCCCAACTGTGA
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Coding sequence (CDS) from alignment at ch2:1209743..1211154+

>KJC3_001941-T1 ID=KJC3_001941-T1|Name=KJC3_001941-T1|organism=Aspergillus niger KJC3|type=CDS|length=3870bp|location=Sequence derived from alignment at ch2:1209743..1211154+ (Aspergillus niger KJC3)
ATGTTCAACGCGCCGTGGATATGCGCTCGATGTTTCGTGCGGTCTGCTGC
TAGGATTGGCTCCAATCCGCGTCTGTTTCTACAACATCGCGGTCTAAAGA
CTGATTCCTCAGGCCTTTCACAAGCCCTATTAGCACGCGCTCGTTCTTTG
ACCAGTGAACATTCCACACTCTCCGCCCATTTGGCTGAGGTATTTGATGC
GAAACTCGCCAAGCGAGTGGGTGAACTCGCACCAATTGCGAGTACCTTGA
AAGAGTGGGAACACGCAAATAGTTCTATATCGGAACTTTTGTCCCTGCTT
GATGACCCAGAAACCGATGCTGAGCTGAGGTCGCTTGCAGTTGAAGACCT
GGAGAGCAGCAAGATCGCGCTGCCTGCCATAGCGGATAATTTAAAGAAGG
CTCTTATACCTCGCCACCCTTTCGCAGACCTCCCATGCTTGCTCGAAATA
CGCCCCGGCGCAGGTGGGGACGAGGCTGGCCTTTTTGCTTTCGAGGTATT
GAGAATGTATATCGCCTTCTGTTCACGTCGTGGTTTCAGGTATAGCATCA
TAAAACAGGATGTTGCAGACGGCCCTGCGCAAGACCGATTGAGTGAAGCG
GTCCTGGAAGTTGACGCGGATGGGGCCTATGACATCCTGAGAACAGAGTC
GGGAGTTCATAGAGTACAGAGGGTTCCCGCTACCGAGGCCAAGGGCCGCA
CACATACCAGTGCCGTTAGTGTGATGATACTTCCTAGTTTTCCAGACTCC
GGGAGTGGCCTTGATAGTTCACTCAATTTTGAGGACCCAAACAGTGACTA
CTATGTGGATCCTCAAGAGGTTCGCACAGAGAAGATGCGAGCCGGTGGCG
CAGGCGGTCAGCATGTCAATAAAACCGAGTCAGCTATTCGGTTGACCCAT
ATACCAACGGGTACCGTTGTCTCTATGCAAGATTCACGTTCCCAACATGC
CAATCGGAAGAAGGCTTGGCAGGTTTTGCGGGCGAGATTAGCTGAAGCAA
GACGAGAAGCCCGAGAACAGGAATTGGTTAACCTAAGGAGAGGAGCAATG
GGCGGTGTTGCTCGAATGGGACGCGGTGACAAGATCCGAACTTACAATTA
CGGTCAGAATCGCTGCACAGACCATCGCAGCGGCCTCACCATACATAACC
TGGATAGTGTTCTTGATGGTGGTGAAGGCCTAGAAACCGTAATGGATAGC
GTACGGACATGGCTCGTCGAGCGCGAAATAGAGGCCATGGCTGCTGAAGA
ATCAGTCCAAGACAAAGAAGGGCTGCGTGCCCAACTGTGAATGTTCAACG
CGCCGTGGATATGCGCTCGATGTTTCGTGCGGTCTGCTGCTAGGATTGGC
TCCAATCCGCGTCTGTTTCTACAACATCGCGGTCTAAAGACTGATTCCTC
AGGCCTTTCACAAGCCCTATTAGCACGCGCTCGTTCTTTGACCAGTGAAC
ATTCCACACTCTCCGCCCATTTGGCTGAGGTATTTGATGCGAAACTCGCC
AAGCGAGTGGGTGAACTCGCACCAATTGCGAGTACCTTGAAAGAGTGGGA
ACACGCAAATAGTTCTATATCGGAACTTTTGTCCCTGCTTGATGACCCAG
AAACCGATGCTGAGCTGAGGTCGCTTGCAGTTGAAGACCTGGAGAGCAGC
AAGATCGCGCTGCCTGCCATAGCGGATAATTTAAAGAAGGCTCTTATACC
TCGCCACCCTTTCGCAGACCTCCCATGCTTGCTCGAAATACGCCCCGGCG
CAGGTGGGGACGAGGCTGGCCTTTTTGCTTTCGAGGTATTGAGAATGTAT
ATCGCCTTCTGTTCACGTCGTGGTTTCAGGTATAGCATCATAAAACAGGA
TGTTGCAGACGGCCCTGCGCAAGACCGATTGAGTGAAGCGGTCCTGGAAG
TTGACGCGGATGGGGCCTATGACATCCTGAGAACAGAGTCGGGAGTTCAT
AGAGTACAGAGGGTTCCCGCTACCGAGGCCAAGGGCCGCACACATACCAG
TGCCGTTAGTGTGATGATACTTCCTAGTTTTCCAGACTCCGGGAGTGGCC
TTGATAGTTCACTCAATTTTGAGGACCCAAACAGTGACTACTATGTGGAT
CCTCAAGAGGTTCGCACAGAGAAGATGCGAGCCGGTGGCGCAGGCGGTCA
GCATGTCAATAAAACCGAGTCAGCTATTCGGTTGACCCATATACCAACGG
GTACCGTTGTCTCTATGCAAGATTCACGTTCCCAACATGCCAATCGGAAG
AAGGCTTGGCAGGTTTTGCGGGCGAGATTAGCTGAAGCAAGACGAGAAGC
CCGAGAACAGGAATTGGTTAACCTAAGGAGAGGAGCAATGGGCGGTGTTG
CTCGAATGGGACGCGGTGACAAGATCCGAACTTACAATTACGGTCAGAAT
CGCTGCACAGACCATCGCAGCGGCCTCACCATACATAACCTGGATAGTGT
TCTTGATGGTGGTGAAGGCCTAGAAACCGTAATGGATAGCGTACGGACAT
GGCTCGTCGAGCGCGAAATAGAGGCCATGGCTGCTGAAGAATCAGTCCAA
GACAAAGAAGGGCTGCGTGCCCAACTGTGAATGTTCAACGCGCCGTGGAT
ATGCGCTCGATGTTTCGTGCGGTCTGCTGCTAGGATTGGCTCCAATCCGC
GTCTGTTTCTACAACATCGCGGTCTAAAGACTGATTCCTCAGGCCTTTCA
CAAGCCCTATTAGCACGCGCTCGTTCTTTGACCAGTGAACATTCCACACT
CTCCGCCCATTTGGCTGAGGTATTTGATGCGAAACTCGCCAAGCGAGTGG
GTGAACTCGCACCAATTGCGAGTACCTTGAAAGAGTGGGAACACGCAAAT
AGTTCTATATCGGAACTTTTGTCCCTGCTTGATGACCCAGAAACCGATGC
TGAGCTGAGGTCGCTTGCAGTTGAAGACCTGGAGAGCAGCAAGATCGCGC
TGCCTGCCATAGCGGATAATTTAAAGAAGGCTCTTATACCTCGCCACCCT
TTCGCAGACCTCCCATGCTTGCTCGAAATACGCCCCGGCGCAGGTGGGGA
CGAGGCTGGCCTTTTTGCTTTCGAGGTATTGAGAATGTATATCGCCTTCT
GTTCACGTCGTGGTTTCAGGTATAGCATCATAAAACAGGATGTTGCAGAC
GGCCCTGCGCAAGACCGATTGAGTGAAGCGGTCCTGGAAGTTGACGCGGA
TGGGGCCTATGACATCCTGAGAACAGAGTCGGGAGTTCATAGAGTACAGA
GGGTTCCCGCTACCGAGGCCAAGGGCCGCACACATACCAGTGCCGTTAGT
GTGATGATACTTCCTAGTTTTCCAGACTCCGGGAGTGGCCTTGATAGTTC
ACTCAATTTTGAGGACCCAAACAGTGACTACTATGTGGATCCTCAAGAGG
TTCGCACAGAGAAGATGCGAGCCGGTGGCGCAGGCGGTCAGCATGTCAAT
AAAACCGAGTCAGCTATTCGGTTGACCCATATACCAACGGGTACCGTTGT
CTCTATGCAAGATTCACGTTCCCAACATGCCAATCGGAAGAAGGCTTGGC
AGGTTTTGCGGGCGAGATTAGCTGAAGCAAGACGAGAAGCCCGAGAACAG
GAATTGGTTAACCTAAGGAGAGGAGCAATGGGCGGTGTTGCTCGAATGGG
ACGCGGTGACAAGATCCGAACTTACAATTACGGTCAGAATCGCTGCACAG
ACCATCGCAGCGGCCTCACCATACATAACCTGGATAGTGTTCTTGATGGT
GGTGAAGGCCTAGAAACCGTAATGGATAGCGTACGGACATGGCTCGTCGA
GCGCGAAATAGAGGCCATGGCTGCTGAAGAATCAGTCCAAGACAAAGAAG
GGCTGCGTGCCCAACTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003747translation release factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001941KJC3_001941Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001941-T1.exon1KJC3_001941-T1.exon1Aspergillus niger KJC3exon
KJC3_001941-T1.exon2KJC3_001941-T1.exon2Aspergillus niger KJC3exon
KJC3_001941-T1.exon3KJC3_001941-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001941-T1.cdsKJC3_001941-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001941-T1KJC3_001941-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000352
DBxrefInterPro:IPR005139
DBxrefPFAM:PF00472
DBxrefPFAM:PF03462
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1209743..1211154 +
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