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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1238012..1240296+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001950-T1 ID=KJC3_001950-T1|Name=KJC3_001950-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2285bp|location=Sequence derived from alignment at ch2:1238012..1240296+ (Aspergillus niger KJC3)
CTTCTATCAGGTAGGAAGGCAGCTAGTAACACGGCAAACCCTGGCACACC
GGTTCCTCTTAACTTGGCTCAGGAGACTTTCCACGCTTCTTACTACTGCC
AGTAAGACTACGGACAATTTCAAGTGATCTCTGTCCCCTCTGTATGGCTT
GAGTCGCTAAATGCTCAGCCCTGTGGATCCAGGTTTTGCTTGGTTCCCAC
CTTGCCTCTTCCACTATCTATAACCCCCGAGCTAGCTAGGGACCTACTAC
TAGTATCATGACCCATCAGGCCAAACGACGACGGGTTGGAACTCAGCCAA
ATGCCACTGTAGGCAATGGCATCGAGTGTCTGGACGGCTCATACTCACCA
GCATCGAAATTCGATCAGGATGCCTGGAATGGATTCTGTGAGCTGGAATC
GGAACCTGTATGACTCTACGACCAATATTTTTTTTTTCTTTTGCTTTCCA
CTGTGTTGAGCGTCGCGATTGATGGTCTCTCTACAGGCTCTTTTCAATGT
GATGCTCCGGGATTTCGGAGTAAAGGGGGTCAAAATTCAAGAAGTCGTGT
CGCTTGACGAGGAGATGATGACATTTTTGAAGTAAGTGCCATACCACAGT
TGCTTCATTGTTTACCAAGCGCTTATACACCCACAGTAAACCCATATATG
GTCTGATCTTTCTGTTCCGTTGGCGCGAGGATGATTCAGATAAGCAAGAA
CCAAGCTGCCCGGAGGGCCTCTGGTTTGCTAACCAGGTCGGCTTCCCTGT
CTATAGATCTAGCCCTGGAGCTTGTCACTGACATTGGTAACCAGACAGCC
AGCAATGCTTGCGCTAGTGTGGCGCTTCTGAACATCGTCAACAACATTAA
AGGTATCGACCTTGGGGAGAATCTACGGAGTTTCAAAGACTTTACCATGC
CGTTCACACCCGCACTGAGGGGAGATGCAATAAGTAACTTCGAGTTTGTC
AAAAGGATACATAATTCATTCGCGAGGTAATTGCTTCGTTCAGTGGGCAA
GCACTTGATTAATCTGGCAGCAGGAAAATGGACATGCTTAGCTCAGACTA
CCAGCTTAAAGCTGAGGCTACATCCAAGCGAAGTCGCCCAGTCAAGAACA
AGCCTGCAGATAATAAAGCAGATGCAAGTTTTCATTTCATTGCTTTCGTC
CCTGCCTTGGGTAAAGTTTGGAAGTTCGACGGCTTAGAACGTCAACCTCA
GGCGCTTGGTGAGTCAGTCAATGATATTACGGTAAGTATCTGTCGCTGAC
TGGACCGGATCCGTAGGCTCTTGCGCATCAGACGAAGATTGGCTGAGCCT
GGTAAAGCCTGATATTCGTACCAGAATGGAGGCATATGAAGAAGATCAAA
TAGAGTTCTCCATTCTGAGTGTTGCTAGAGATCCGCTCCCTGAGCTTGTC
GATCAATTAGCTACCAACGTAAAGAGCCTAGAGATTATTCAAGAGCGCTT
GAGCTCGATTCACGAGAGCTCAATTGACCTTGAATCGACTCTGGCGGATT
CAGTAAGCGAAAATACCATCCTGGGGCCGGACGAAAGCTATACGTTGACA
AGGGAATCCATTGACCAAGTGACTGTCCATAAAACTCAAGAGAGAGAATA
CCAGACATGCTCAGTGGAAGAACTTATTCATCACCGGCAGAGGCTGGGTC
ATGCTCAGCAGGACCTACGAGCAGCAATCCGAGAAGAGCAACAGTCTCAG
CAGGTGGATGAGGACTATGCGGAAGGACGAAGATATGATTATGGCCCGGC
CATTCGAACGTGGTTACGTTTTCTAGCACGAAAAAGGCTGATAGAGGACT
TGTTGTGAAAACTCCATCAAAATGATCGTGTCGTTTTCGTTTGCCTTGTC
GCCATTCTCCAGCGAGGGGGTTCGAAAGGGGGTGGGGAGAGAATAATGTT
TGTCTGTTGTACGTAGAGCGTGCACTAGGAGCACTTCACCGGGAATGACC
ACATTAGCGTTGAATGGGCACAACATAGCATTTCTCGACAGACGATGGTT
GCTGTCCGGTGACTCTTATTACTCGGTCATCGAAACCATGGAGGCTGTGG
GAGATGTCATGATATGAGGTAAAACATAGAAAGCGGATGGAAAGCCCATA
TGGACGGACAACTTGGGCTTGGTATATTGCAGATAGATAAGACGCGAGGA
TGGATTTAGCTTAGAGCATGCAGTAGGAATCAAGTGTAAGTATCATGTCT
TTAGTGAGCGCGTAATGAACGAATGGAAAAGATCAAAGTAGTACTAGTAT
TTTACTACTAACCGCCCAAGTGTACGGAGTACTGT back to topCoding sequence (CDS) from alignment at ch2:1238012..1240296+ >KJC3_001950-T1 ID=KJC3_001950-T1|Name=KJC3_001950-T1|organism=Aspergillus niger KJC3|type=CDS|length=7524bp|location=Sequence derived from alignment at ch2:1238012..1240296+ (Aspergillus niger KJC3)
ATGACCCATCAGGCCAAACGACGACGGGTTGGAACTCAGCCAAATGCCAC
TGTAGGCAATGGCATCGAGTGTCTGGACGGCTCATACTCACCAGCATCGA
AATTCGATCAGGATGCCTGGAATGGATTCTGTGAGCTGGAATCGGAACCT
GCTCTTTTCAATGTGATGCTCCGGGATTTCGGAGTAAAGGGGGTCAAAAT
TCAAGAAGTCGTGTCGCTTGACGAGGAGATGATGACATTTTTGAATAAAC
CCATATATGGTCTGATCTTTCTGTTCCGTTGGCGCGAGGATGATTCAGAT
AAGCAAGAACCAAGCTGCCCGGAGGGCCTCTGGTTTGCTAACCAGACAGC
CAGCAATGCTTGCGCTAGTGTGGCGCTTCTGAACATCGTCAACAACATTA
AAGGTATCGACCTTGGGGAGAATCTACGGAGTTTCAAAGACTTTACCATG
CCGTTCACACCCGCACTGAGGGGAGATGCAATAAGTAACTTCGAGTTTGT
CAAAAGGATACATAATTCATTCGCGAGGAAAATGGACATGCTTAGCTCAG
ACTACCAGCTTAAAGCTGAGGCTACATCCAAGCGAAGTCGCCCAGTCAAG
AACAAGCCTGCAGATAATAAAGCAGATGCAAGTTTTCATTTCATTGCTTT
CGTCCCTGCCTTGGGTAAAGTTTGGAAGTTCGACGGCTTAGAACGTCAAC
CTCAGGCGCTTGGCTCTTGCGCATCAGACGAAGATTGGCTGAGCCTGGTA
AAGCCTGATATTCGTACCAGAATGGAGGCATATGAAGAAGATCAAATAGA
GTTCTCCATTCTGAGTGTTGCTAGAGATCCGCTCCCTGAGCTTGTCGATC
AATTAGCTACCAACGTAAAGAGCCTAGAGATTATTCAAGAGCGCTTGAGC
TCGATTCACGAGAGCTCAATTGACCTTGAATCGACTCTGGCGGATTCAGT
AAGCGAAAATACCATCCTGGGGCCGGACGAAAGCTATACGTTGACAAGGG
AATCCATTGACCAAGTGACTGTCCATAAAACTCAAGAGAGAGAATACCAG
ACATGCTCAGTGGAAGAACTTATTCATCACCGGCAGAGGCTGGGTCATGC
TCAGCAGGACCTACGAGCAGCAATCCGAGAAGAGCAACAGTCTCAGCAGG
TGGATGAGGACTATGCGGAAGGACGAAGATATGATTATGGCCCGGCCATT
CGAACGTGGTTACGTTTTCTAGCACGAAAAAGGCTGATAGAGGACTTGTT
GTGAATGACCCATCAGGCCAAACGACGACGGGTTGGAACTCAGCCAAATG
CCACTGTAGGCAATGGCATCGAGTGTCTGGACGGCTCATACTCACCAGCA
TCGAAATTCGATCAGGATGCCTGGAATGGATTCTGTGAGCTGGAATCGGA
ACCTGCTCTTTTCAATGTGATGCTCCGGGATTTCGGAGTAAAGGGGGTCA
AAATTCAAGAAGTCGTGTCGCTTGACGAGGAGATGATGACATTTTTGAAT
AAACCCATATATGGTCTGATCTTTCTGTTCCGTTGGCGCGAGGATGATTC
AGATAAGCAAGAACCAAGCTGCCCGGAGGGCCTCTGGTTTGCTAACCAGA
CAGCCAGCAATGCTTGCGCTAGTGTGGCGCTTCTGAACATCGTCAACAAC
ATTAAAGGTATCGACCTTGGGGAGAATCTACGGAGTTTCAAAGACTTTAC
CATGCCGTTCACACCCGCACTGAGGGGAGATGCAATAAGTAACTTCGAGT
TTGTCAAAAGGATACATAATTCATTCGCGAGGAAAATGGACATGCTTAGC
TCAGACTACCAGCTTAAAGCTGAGGCTACATCCAAGCGAAGTCGCCCAGT
CAAGAACAAGCCTGCAGATAATAAAGCAGATGCAAGTTTTCATTTCATTG
CTTTCGTCCCTGCCTTGGGTAAAGTTTGGAAGTTCGACGGCTTAGAACGT
CAACCTCAGGCGCTTGGCTCTTGCGCATCAGACGAAGATTGGCTGAGCCT
GGTAAAGCCTGATATTCGTACCAGAATGGAGGCATATGAAGAAGATCAAA
TAGAGTTCTCCATTCTGAGTGTTGCTAGAGATCCGCTCCCTGAGCTTGTC
GATCAATTAGCTACCAACGTAAAGAGCCTAGAGATTATTCAAGAGCGCTT
GAGCTCGATTCACGAGAGCTCAATTGACCTTGAATCGACTCTGGCGGATT
CAGTAAGCGAAAATACCATCCTGGGGCCGGACGAAAGCTATACGTTGACA
AGGGAATCCATTGACCAAGTGACTGTCCATAAAACTCAAGAGAGAGAATA
CCAGACATGCTCAGTGGAAGAACTTATTCATCACCGGCAGAGGCTGGGTC
ATGCTCAGCAGGACCTACGAGCAGCAATCCGAGAAGAGCAACAGTCTCAG
CAGGTGGATGAGGACTATGCGGAAGGACGAAGATATGATTATGGCCCGGC
CATTCGAACGTGGTTACGTTTTCTAGCACGAAAAAGGCTGATAGAGGACT
TGTTGTGAATGACCCATCAGGCCAAACGACGACGGGTTGGAACTCAGCCA
AATGCCACTGTAGGCAATGGCATCGAGTGTCTGGACGGCTCATACTCACC
AGCATCGAAATTCGATCAGGATGCCTGGAATGGATTCTGTGAGCTGGAAT
CGGAACCTGCTCTTTTCAATGTGATGCTCCGGGATTTCGGAGTAAAGGGG
GTCAAAATTCAAGAAGTCGTGTCGCTTGACGAGGAGATGATGACATTTTT
GAATAAACCCATATATGGTCTGATCTTTCTGTTCCGTTGGCGCGAGGATG
ATTCAGATAAGCAAGAACCAAGCTGCCCGGAGGGCCTCTGGTTTGCTAAC
CAGACAGCCAGCAATGCTTGCGCTAGTGTGGCGCTTCTGAACATCGTCAA
CAACATTAAAGGTATCGACCTTGGGGAGAATCTACGGAGTTTCAAAGACT
TTACCATGCCGTTCACACCCGCACTGAGGGGAGATGCAATAAGTAACTTC
GAGTTTGTCAAAAGGATACATAATTCATTCGCGAGGAAAATGGACATGCT
TAGCTCAGACTACCAGCTTAAAGCTGAGGCTACATCCAAGCGAAGTCGCC
CAGTCAAGAACAAGCCTGCAGATAATAAAGCAGATGCAAGTTTTCATTTC
ATTGCTTTCGTCCCTGCCTTGGGTAAAGTTTGGAAGTTCGACGGCTTAGA
ACGTCAACCTCAGGCGCTTGGCTCTTGCGCATCAGACGAAGATTGGCTGA
GCCTGGTAAAGCCTGATATTCGTACCAGAATGGAGGCATATGAAGAAGAT
CAAATAGAGTTCTCCATTCTGAGTGTTGCTAGAGATCCGCTCCCTGAGCT
TGTCGATCAATTAGCTACCAACGTAAAGAGCCTAGAGATTATTCAAGAGC
GCTTGAGCTCGATTCACGAGAGCTCAATTGACCTTGAATCGACTCTGGCG
GATTCAGTAAGCGAAAATACCATCCTGGGGCCGGACGAAAGCTATACGTT
GACAAGGGAATCCATTGACCAAGTGACTGTCCATAAAACTCAAGAGAGAG
AATACCAGACATGCTCAGTGGAAGAACTTATTCATCACCGGCAGAGGCTG
GGTCATGCTCAGCAGGACCTACGAGCAGCAATCCGAGAAGAGCAACAGTC
TCAGCAGGTGGATGAGGACTATGCGGAAGGACGAAGATATGATTATGGCC
CGGCCATTCGAACGTGGTTACGTTTTCTAGCACGAAAAAGGCTGATAGAG
GACTTGTTGTGAATGACCCATCAGGCCAAACGACGACGGGTTGGAACTCA
GCCAAATGCCACTGTAGGCAATGGCATCGAGTGTCTGGACGGCTCATACT
CACCAGCATCGAAATTCGATCAGGATGCCTGGAATGGATTCTGTGAGCTG
GAATCGGAACCTGCTCTTTTCAATGTGATGCTCCGGGATTTCGGAGTAAA
GGGGGTCAAAATTCAAGAAGTCGTGTCGCTTGACGAGGAGATGATGACAT
TTTTGAATAAACCCATATATGGTCTGATCTTTCTGTTCCGTTGGCGCGAG
GATGATTCAGATAAGCAAGAACCAAGCTGCCCGGAGGGCCTCTGGTTTGC
TAACCAGACAGCCAGCAATGCTTGCGCTAGTGTGGCGCTTCTGAACATCG
TCAACAACATTAAAGGTATCGACCTTGGGGAGAATCTACGGAGTTTCAAA
GACTTTACCATGCCGTTCACACCCGCACTGAGGGGAGATGCAATAAGTAA
CTTCGAGTTTGTCAAAAGGATACATAATTCATTCGCGAGGAAAATGGACA
TGCTTAGCTCAGACTACCAGCTTAAAGCTGAGGCTACATCCAAGCGAAGT
CGCCCAGTCAAGAACAAGCCTGCAGATAATAAAGCAGATGCAAGTTTTCA
TTTCATTGCTTTCGTCCCTGCCTTGGGTAAAGTTTGGAAGTTCGACGGCT
TAGAACGTCAACCTCAGGCGCTTGGCTCTTGCGCATCAGACGAAGATTGG
CTGAGCCTGGTAAAGCCTGATATTCGTACCAGAATGGAGGCATATGAAGA
AGATCAAATAGAGTTCTCCATTCTGAGTGTTGCTAGAGATCCGCTCCCTG
AGCTTGTCGATCAATTAGCTACCAACGTAAAGAGCCTAGAGATTATTCAA
GAGCGCTTGAGCTCGATTCACGAGAGCTCAATTGACCTTGAATCGACTCT
GGCGGATTCAGTAAGCGAAAATACCATCCTGGGGCCGGACGAAAGCTATA
CGTTGACAAGGGAATCCATTGACCAAGTGACTGTCCATAAAACTCAAGAG
AGAGAATACCAGACATGCTCAGTGGAAGAACTTATTCATCACCGGCAGAG
GCTGGGTCATGCTCAGCAGGACCTACGAGCAGCAATCCGAGAAGAGCAAC
AGTCTCAGCAGGTGGATGAGGACTATGCGGAAGGACGAAGATATGATTAT
GGCCCGGCCATTCGAACGTGGTTACGTTTTCTAGCACGAAAAAGGCTGAT
AGAGGACTTGTTGTGAATGACCCATCAGGCCAAACGACGACGGGTTGGAA
CTCAGCCAAATGCCACTGTAGGCAATGGCATCGAGTGTCTGGACGGCTCA
TACTCACCAGCATCGAAATTCGATCAGGATGCCTGGAATGGATTCTGTGA
GCTGGAATCGGAACCTGCTCTTTTCAATGTGATGCTCCGGGATTTCGGAG
TAAAGGGGGTCAAAATTCAAGAAGTCGTGTCGCTTGACGAGGAGATGATG
ACATTTTTGAATAAACCCATATATGGTCTGATCTTTCTGTTCCGTTGGCG
CGAGGATGATTCAGATAAGCAAGAACCAAGCTGCCCGGAGGGCCTCTGGT
TTGCTAACCAGACAGCCAGCAATGCTTGCGCTAGTGTGGCGCTTCTGAAC
ATCGTCAACAACATTAAAGGTATCGACCTTGGGGAGAATCTACGGAGTTT
CAAAGACTTTACCATGCCGTTCACACCCGCACTGAGGGGAGATGCAATAA
GTAACTTCGAGTTTGTCAAAAGGATACATAATTCATTCGCGAGGAAAATG
GACATGCTTAGCTCAGACTACCAGCTTAAAGCTGAGGCTACATCCAAGCG
AAGTCGCCCAGTCAAGAACAAGCCTGCAGATAATAAAGCAGATGCAAGTT
TTCATTTCATTGCTTTCGTCCCTGCCTTGGGTAAAGTTTGGAAGTTCGAC
GGCTTAGAACGTCAACCTCAGGCGCTTGGCTCTTGCGCATCAGACGAAGA
TTGGCTGAGCCTGGTAAAGCCTGATATTCGTACCAGAATGGAGGCATATG
AAGAAGATCAAATAGAGTTCTCCATTCTGAGTGTTGCTAGAGATCCGCTC
CCTGAGCTTGTCGATCAATTAGCTACCAACGTAAAGAGCCTAGAGATTAT
TCAAGAGCGCTTGAGCTCGATTCACGAGAGCTCAATTGACCTTGAATCGA
CTCTGGCGGATTCAGTAAGCGAAAATACCATCCTGGGGCCGGACGAAAGC
TATACGTTGACAAGGGAATCCATTGACCAAGTGACTGTCCATAAAACTCA
AGAGAGAGAATACCAGACATGCTCAGTGGAAGAACTTATTCATCACCGGC
AGAGGCTGGGTCATGCTCAGCAGGACCTACGAGCAGCAATCCGAGAAGAG
CAACAGTCTCAGCAGGTGGATGAGGACTATGCGGAAGGACGAAGATATGA
TTATGGCCCGGCCATTCGAACGTGGTTACGTTTTCTAGCACGAAAAAGGC
TGATAGAGGACTTGTTGTGAATGACCCATCAGGCCAAACGACGACGGGTT
GGAACTCAGCCAAATGCCACTGTAGGCAATGGCATCGAGTGTCTGGACGG
CTCATACTCACCAGCATCGAAATTCGATCAGGATGCCTGGAATGGATTCT
GTGAGCTGGAATCGGAACCTGCTCTTTTCAATGTGATGCTCCGGGATTTC
GGAGTAAAGGGGGTCAAAATTCAAGAAGTCGTGTCGCTTGACGAGGAGAT
GATGACATTTTTGAATAAACCCATATATGGTCTGATCTTTCTGTTCCGTT
GGCGCGAGGATGATTCAGATAAGCAAGAACCAAGCTGCCCGGAGGGCCTC
TGGTTTGCTAACCAGACAGCCAGCAATGCTTGCGCTAGTGTGGCGCTTCT
GAACATCGTCAACAACATTAAAGGTATCGACCTTGGGGAGAATCTACGGA
GTTTCAAAGACTTTACCATGCCGTTCACACCCGCACTGAGGGGAGATGCA
ATAAGTAACTTCGAGTTTGTCAAAAGGATACATAATTCATTCGCGAGGAA
AATGGACATGCTTAGCTCAGACTACCAGCTTAAAGCTGAGGCTACATCCA
AGCGAAGTCGCCCAGTCAAGAACAAGCCTGCAGATAATAAAGCAGATGCA
AGTTTTCATTTCATTGCTTTCGTCCCTGCCTTGGGTAAAGTTTGGAAGTT
CGACGGCTTAGAACGTCAACCTCAGGCGCTTGGCTCTTGCGCATCAGACG
AAGATTGGCTGAGCCTGGTAAAGCCTGATATTCGTACCAGAATGGAGGCA
TATGAAGAAGATCAAATAGAGTTCTCCATTCTGAGTGTTGCTAGAGATCC
GCTCCCTGAGCTTGTCGATCAATTAGCTACCAACGTAAAGAGCCTAGAGA
TTATTCAAGAGCGCTTGAGCTCGATTCACGAGAGCTCAATTGACCTTGAA
TCGACTCTGGCGGATTCAGTAAGCGAAAATACCATCCTGGGGCCGGACGA
AAGCTATACGTTGACAAGGGAATCCATTGACCAAGTGACTGTCCATAAAA
CTCAAGAGAGAGAATACCAGACATGCTCAGTGGAAGAACTTATTCATCAC
CGGCAGAGGCTGGGTCATGCTCAGCAGGACCTACGAGCAGCAATCCGAGA
AGAGCAACAGTCTCAGCAGGTGGATGAGGACTATGCGGAAGGACGAAGAT
ATGATTATGGCCCGGCCATTCGAACGTGGTTACGTTTTCTAGCACGAAAA
AGGCTGATAGAGGACTTGTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004843 | thiol-dependent ubiquitin-specific protease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001950-T1.utr5p1 | KJC3_001950-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001950-T1.utr3p1 | KJC3_001950-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0015601 |
| DBxref | InterPro:IPR038765 |
| DBxref | InterPro:IPR036959 |
| DBxref | InterPro:IPR001578 |
| DBxref | PFAM:PF01088 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1238012..1240296 + |
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