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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1240425..1242956+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001951-T1 ID=KJC3_001951-T1|Name=KJC3_001951-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2532bp|location=Sequence derived from alignment at ch2:1240425..1242956+ (Aspergillus niger KJC3)
CTTAGGTTTCCATCTACTAGGTTGGGCCTTTCCCCTTGCCTCTGCCATGA
AGAGAGAAAAGCGCCTCGGACATGCACAAATAATACTATGATTGATCATT
CCCTCCGGGCCTGTGGTAACAAAATACCGAACTAATGTCCGCAGCCTTCC
ATCTTCTCAGCAGGATGTGCAATTACTACTACTGAGAATACGTACGGAGT
AGTAAATACTAAGTTTAGCTGAGCGGCCTTTAACAGTACTACTTCCTTCA
CCCTGTCCATCCCCCCCTTTTTTCCTTTATGCTTCTTCGCGTCCCCTTTA
TCTACATGAATCAGTGGGTAACCCCCCACCCCGAATGATTCAGGAGTACG
GGCAAGACCCAACTCCTGCCAGTGCCAGTGCCAGTGCCAGTGCCAGTGCC
ATTGTCATTGACACTTTATCATCTGCAGGCTGGCCTGCATGACTACTAGT
ATTGTCTTGATCTCTTCTTTATCTTACTCGCTTTTGCTTTCTTAGTCAAT
CCGTCTTGGTCTCTCCTCTCCCAACCAATTGCGTGTGTCGGTGACAGTGA
CGTAGAAAGACCGAGAGGGACGTCACCGCCTGGAAGTCAGTGCACGCGCC
CGCCGCATTAATTATTCTTCTTATTATCGTTTCCCCAGCACTTTTCGGCA
CTTTTTGCCTTGCTGTTGCTGCTGTCTCTGGCTGGTCCTCATCTACTTGC
TTATTCCCGTGCTTGTGCTCGCCGTGCAAGCCTCTTTCTATCAGTTAAGT
CCTGTGATCGTCTGGGTGTCTGCCCGGTGCACACCGCAGATCTCGCTCCG
ACACTCACCATCGACCCTTTTCGCCACAAGCGACGCAAAGAACATCAACT
CCCTTTTGCCTGTCAGATTCGCTATACTATCACCAGACGCATAGAGTGCC
ATCATGTCTTCCACTTCAGCCCAAGAAATCCCTGAGAAGGCACCTGATGA
TTCTTCCAAGCTGAAGACTTTCTTGTCCATCCTCCGCAAGTACGTGGGAC
TTTGACATGGGCTACACCGTTGCTCACTGCCCGGTACCTCTCACCGGTAG
TTTGTGCTGATAGGTCTGGGTGGTCTTGCCAGGTTCGTCGGAGTGGCCGA
CATCGCGTCTGTTCGTTTCTCGTTGCCAGCGCATCTTCTAGAACCCACGC
CAAATCTGGGTAAGCTGTCTCCTGTGCTATCTATCGCACATGAATCATCT
CCCATCAGCGGACTGCTAATATAGATTTGCTTGCCCAATCAGAATATTGG
AATTACCTAGACAGACCGGAGGCCTTCGCAAGGTCAGCAAGATAGCCTAT
TCATAATTAGGGCTTGGTGTTCTCTGACATGGTTGTCACAGCATTGGTCA
ATCGGAAGATCCGCTGGGACGCACGCTGGAGGTTCTGAGATTCTGGTTTA
CCAAGGACTTGGTATAATGCCCCCAATCAGTCTGCATTGTCAATCAGTGG
CAGTTCATTGACCAGATCGCAGAAATACATCAAAGGCAAACCATGCAAGC
CGTACAATTCTACATTGGGGGAATTTTTCAGAGTAGGTTTGAGGCGGAGA
CCTTGTGGCGTAAGTTGATGGTATATTCTGACTTGCCTGGAACTAGTGCA
CCTGGGAAGTAGATCAGACGCTCCCAGAAGTCTCGCCGACTCCAAAAGCT
TTCTCCAACGCAAAGGACAGCAGCACAGATCCCGTCAAGATTTGCTACTT
AACTGAACAAACATCTCACCACCCTCCGGTTTCTGCCTTTTTTATAGACT
GCCCGGATACAGGGGTCTCTGCGCGTGGTTTTGACCAGATCAGTGCCAAG
TTCACAGGCACCAGCATCCGGGTCGCTCCTGGCCAGCACAACCTGGGAAT
CTTCGTCAACTTGAAAAACAGAGATAATGAGGAATACCACTTGACCCATC
CTGCAGCACACCTTGGTGGTCTCCTCAGAGGCGCTTTGGCGATCTCTGTC
TCAGACACTTGTTACATTACTTGCGCCAAGACGCGCATCAAAGTCATTTT
ACAGTACTTGGAGGAGGGCTGGATTGGTCGAGCGCAGAATAAGGTTGAGG
GTGTGATCTTTCGATACGATCCGGATAAGGACGTCACCACGAGAATCAAA
GATGTACCCGAAGGCGATGTTCTTGCCCGGATCAGCGGTTCTTGGCATGG
GCAAGTTTTCTACACGTTGGCCGGTACAAACGAACCTCGGCTTTTGATCG
ATGTCACACCCCTCTTCCCAGTCGCGAAGACGCTGCCTCCGGAAGAGAGT
CAACTATCCAACGAATCCCGCAAATTTTGGTCTTCGGTTACCGAAGCTAT
CGTCGACAAAAAGTACGGCCAGGCTACCAAGCTCAAACAAGACATCGAAG
AGCGACAACGGCAAAAGGCCGCAGAGCGTCAGAACAAGAACGAAACGTGG
CAGCCTCGTTTCTTCACCGGCGCTGTCACGCCTTTGGGAAGACCTGAGCT
AACAGATGAAGGGCTGAAGGTACTCGATGGGCTACGCAGCGGTGATTATA
GGTTGGACGAGAGTCTTACAAAGGGTGCATAG back to topCoding sequence (CDS) from alignment at ch2:1240425..1242956+ >KJC3_001951-T1 ID=KJC3_001951-T1|Name=KJC3_001951-T1|organism=Aspergillus niger KJC3|type=CDS|length=7614bp|location=Sequence derived from alignment at ch2:1240425..1242956+ (Aspergillus niger KJC3)
ATGTCTTCCACTTCAGCCCAAGAAATCCCTGAGAAGGCACCTGATGATTC
TTCCAAGCTGAAGACTTTCTTGTCCATCCTCCGCAAGTTCGTCGGAGTGG
CCGACATCGCGTCTGTTCGTTTCTCGTTGCCAGCGCATCTTCTAGAACCC
ACGCCAAATCTGGAATATTGGAATTACCTAGACAGACCGGAGGCCTTCGC
AAGCATTGGTCAATCGGAAGATCCGCTGGGACGCACGCTGGAGGTTCTGA
GATTCTGGTTTACCAAGGACTTGAAATACATCAAAGGCAAACCATGCAAG
CCGTACAATTCTACATTGGGGGAATTTTTCAGATGCACCTGGGAAGTAGA
TCAGACGCTCCCAGAAGTCTCGCCGACTCCAAAAGCTTTCTCCAACGCAA
AGGACAGCAGCACAGATCCCGTCAAGATTTGCTACTTAACTGAACAAACA
TCTCACCACCCTCCGGTTTCTGCCTTTTTTATAGACTGCCCGGATACAGG
GGTCTCTGCGCGTGGTTTTGACCAGATCAGTGCCAAGTTCACAGGCACCA
GCATCCGGGTCGCTCCTGGCCAGCACAACCTGGGAATCTTCGTCAACTTG
AAAAACAGAGATAATGAGGAATACCACTTGACCCATCCTGCAGCACACCT
TGGTGGTCTCCTCAGAGGCGCTTTGGCGATCTCTGTCTCAGACACTTGTT
ACATTACTTGCGCCAAGACGCGCATCAAAGTCATTTTACAGTACTTGGAG
GAGGGCTGGATTGGTCGAGCGCAGAATAAGGTTGAGGGTGTGATCTTTCG
ATACGATCCGGATAAGGACGTCACCACGAGAATCAAAGATGTACCCGAAG
GCGATGTTCTTGCCCGGATCAGCGGTTCTTGGCATGGGCAAGTTTTCTAC
ACGTTGGCCGGTACAAACGAACCTCGGCTTTTGATCGATGTCACACCCCT
CTTCCCAGTCGCGAAGACGCTGCCTCCGGAAGAGAGTCAACTATCCAACG
AATCCCGCAAATTTTGGTCTTCGGTTACCGAAGCTATCGTCGACAAAAAG
TACGGCCAGGCTACCAAGCTCAAACAAGACATCGAAGAGCGACAACGGCA
AAAGGCCGCAGAGCGTCAGAACAAGAACGAAACGTGGCAGCCTCGTTTCT
TCACCGGCGCTGTCACGCCTTTGGGAAGACCTGAGCTAACAGATGAAGGG
CTGAAGGTACTCGATGGGCTACGCAGCGGTGATTATAGGTTGGACGAGAG
TCTTACAAAGGGTGCATAGATGTCTTCCACTTCAGCCCAAGAAATCCCTG
AGAAGGCACCTGATGATTCTTCCAAGCTGAAGACTTTCTTGTCCATCCTC
CGCAAGTTCGTCGGAGTGGCCGACATCGCGTCTGTTCGTTTCTCGTTGCC
AGCGCATCTTCTAGAACCCACGCCAAATCTGGAATATTGGAATTACCTAG
ACAGACCGGAGGCCTTCGCAAGCATTGGTCAATCGGAAGATCCGCTGGGA
CGCACGCTGGAGGTTCTGAGATTCTGGTTTACCAAGGACTTGAAATACAT
CAAAGGCAAACCATGCAAGCCGTACAATTCTACATTGGGGGAATTTTTCA
GATGCACCTGGGAAGTAGATCAGACGCTCCCAGAAGTCTCGCCGACTCCA
AAAGCTTTCTCCAACGCAAAGGACAGCAGCACAGATCCCGTCAAGATTTG
CTACTTAACTGAACAAACATCTCACCACCCTCCGGTTTCTGCCTTTTTTA
TAGACTGCCCGGATACAGGGGTCTCTGCGCGTGGTTTTGACCAGATCAGT
GCCAAGTTCACAGGCACCAGCATCCGGGTCGCTCCTGGCCAGCACAACCT
GGGAATCTTCGTCAACTTGAAAAACAGAGATAATGAGGAATACCACTTGA
CCCATCCTGCAGCACACCTTGGTGGTCTCCTCAGAGGCGCTTTGGCGATC
TCTGTCTCAGACACTTGTTACATTACTTGCGCCAAGACGCGCATCAAAGT
CATTTTACAGTACTTGGAGGAGGGCTGGATTGGTCGAGCGCAGAATAAGG
TTGAGGGTGTGATCTTTCGATACGATCCGGATAAGGACGTCACCACGAGA
ATCAAAGATGTACCCGAAGGCGATGTTCTTGCCCGGATCAGCGGTTCTTG
GCATGGGCAAGTTTTCTACACGTTGGCCGGTACAAACGAACCTCGGCTTT
TGATCGATGTCACACCCCTCTTCCCAGTCGCGAAGACGCTGCCTCCGGAA
GAGAGTCAACTATCCAACGAATCCCGCAAATTTTGGTCTTCGGTTACCGA
AGCTATCGTCGACAAAAAGTACGGCCAGGCTACCAAGCTCAAACAAGACA
TCGAAGAGCGACAACGGCAAAAGGCCGCAGAGCGTCAGAACAAGAACGAA
ACGTGGCAGCCTCGTTTCTTCACCGGCGCTGTCACGCCTTTGGGAAGACC
TGAGCTAACAGATGAAGGGCTGAAGGTACTCGATGGGCTACGCAGCGGTG
ATTATAGGTTGGACGAGAGTCTTACAAAGGGTGCATAGATGTCTTCCACT
TCAGCCCAAGAAATCCCTGAGAAGGCACCTGATGATTCTTCCAAGCTGAA
GACTTTCTTGTCCATCCTCCGCAAGTTCGTCGGAGTGGCCGACATCGCGT
CTGTTCGTTTCTCGTTGCCAGCGCATCTTCTAGAACCCACGCCAAATCTG
GAATATTGGAATTACCTAGACAGACCGGAGGCCTTCGCAAGCATTGGTCA
ATCGGAAGATCCGCTGGGACGCACGCTGGAGGTTCTGAGATTCTGGTTTA
CCAAGGACTTGAAATACATCAAAGGCAAACCATGCAAGCCGTACAATTCT
ACATTGGGGGAATTTTTCAGATGCACCTGGGAAGTAGATCAGACGCTCCC
AGAAGTCTCGCCGACTCCAAAAGCTTTCTCCAACGCAAAGGACAGCAGCA
CAGATCCCGTCAAGATTTGCTACTTAACTGAACAAACATCTCACCACCCT
CCGGTTTCTGCCTTTTTTATAGACTGCCCGGATACAGGGGTCTCTGCGCG
TGGTTTTGACCAGATCAGTGCCAAGTTCACAGGCACCAGCATCCGGGTCG
CTCCTGGCCAGCACAACCTGGGAATCTTCGTCAACTTGAAAAACAGAGAT
AATGAGGAATACCACTTGACCCATCCTGCAGCACACCTTGGTGGTCTCCT
CAGAGGCGCTTTGGCGATCTCTGTCTCAGACACTTGTTACATTACTTGCG
CCAAGACGCGCATCAAAGTCATTTTACAGTACTTGGAGGAGGGCTGGATT
GGTCGAGCGCAGAATAAGGTTGAGGGTGTGATCTTTCGATACGATCCGGA
TAAGGACGTCACCACGAGAATCAAAGATGTACCCGAAGGCGATGTTCTTG
CCCGGATCAGCGGTTCTTGGCATGGGCAAGTTTTCTACACGTTGGCCGGT
ACAAACGAACCTCGGCTTTTGATCGATGTCACACCCCTCTTCCCAGTCGC
GAAGACGCTGCCTCCGGAAGAGAGTCAACTATCCAACGAATCCCGCAAAT
TTTGGTCTTCGGTTACCGAAGCTATCGTCGACAAAAAGTACGGCCAGGCT
ACCAAGCTCAAACAAGACATCGAAGAGCGACAACGGCAAAAGGCCGCAGA
GCGTCAGAACAAGAACGAAACGTGGCAGCCTCGTTTCTTCACCGGCGCTG
TCACGCCTTTGGGAAGACCTGAGCTAACAGATGAAGGGCTGAAGGTACTC
GATGGGCTACGCAGCGGTGATTATAGGTTGGACGAGAGTCTTACAAAGGG
TGCATAGATGTCTTCCACTTCAGCCCAAGAAATCCCTGAGAAGGCACCTG
ATGATTCTTCCAAGCTGAAGACTTTCTTGTCCATCCTCCGCAAGTTCGTC
GGAGTGGCCGACATCGCGTCTGTTCGTTTCTCGTTGCCAGCGCATCTTCT
AGAACCCACGCCAAATCTGGAATATTGGAATTACCTAGACAGACCGGAGG
CCTTCGCAAGCATTGGTCAATCGGAAGATCCGCTGGGACGCACGCTGGAG
GTTCTGAGATTCTGGTTTACCAAGGACTTGAAATACATCAAAGGCAAACC
ATGCAAGCCGTACAATTCTACATTGGGGGAATTTTTCAGATGCACCTGGG
AAGTAGATCAGACGCTCCCAGAAGTCTCGCCGACTCCAAAAGCTTTCTCC
AACGCAAAGGACAGCAGCACAGATCCCGTCAAGATTTGCTACTTAACTGA
ACAAACATCTCACCACCCTCCGGTTTCTGCCTTTTTTATAGACTGCCCGG
ATACAGGGGTCTCTGCGCGTGGTTTTGACCAGATCAGTGCCAAGTTCACA
GGCACCAGCATCCGGGTCGCTCCTGGCCAGCACAACCTGGGAATCTTCGT
CAACTTGAAAAACAGAGATAATGAGGAATACCACTTGACCCATCCTGCAG
CACACCTTGGTGGTCTCCTCAGAGGCGCTTTGGCGATCTCTGTCTCAGAC
ACTTGTTACATTACTTGCGCCAAGACGCGCATCAAAGTCATTTTACAGTA
CTTGGAGGAGGGCTGGATTGGTCGAGCGCAGAATAAGGTTGAGGGTGTGA
TCTTTCGATACGATCCGGATAAGGACGTCACCACGAGAATCAAAGATGTA
CCCGAAGGCGATGTTCTTGCCCGGATCAGCGGTTCTTGGCATGGGCAAGT
TTTCTACACGTTGGCCGGTACAAACGAACCTCGGCTTTTGATCGATGTCA
CACCCCTCTTCCCAGTCGCGAAGACGCTGCCTCCGGAAGAGAGTCAACTA
TCCAACGAATCCCGCAAATTTTGGTCTTCGGTTACCGAAGCTATCGTCGA
CAAAAAGTACGGCCAGGCTACCAAGCTCAAACAAGACATCGAAGAGCGAC
AACGGCAAAAGGCCGCAGAGCGTCAGAACAAGAACGAAACGTGGCAGCCT
CGTTTCTTCACCGGCGCTGTCACGCCTTTGGGAAGACCTGAGCTAACAGA
TGAAGGGCTGAAGGTACTCGATGGGCTACGCAGCGGTGATTATAGGTTGG
ACGAGAGTCTTACAAAGGGTGCATAGATGTCTTCCACTTCAGCCCAAGAA
ATCCCTGAGAAGGCACCTGATGATTCTTCCAAGCTGAAGACTTTCTTGTC
CATCCTCCGCAAGTTCGTCGGAGTGGCCGACATCGCGTCTGTTCGTTTCT
CGTTGCCAGCGCATCTTCTAGAACCCACGCCAAATCTGGAATATTGGAAT
TACCTAGACAGACCGGAGGCCTTCGCAAGCATTGGTCAATCGGAAGATCC
GCTGGGACGCACGCTGGAGGTTCTGAGATTCTGGTTTACCAAGGACTTGA
AATACATCAAAGGCAAACCATGCAAGCCGTACAATTCTACATTGGGGGAA
TTTTTCAGATGCACCTGGGAAGTAGATCAGACGCTCCCAGAAGTCTCGCC
GACTCCAAAAGCTTTCTCCAACGCAAAGGACAGCAGCACAGATCCCGTCA
AGATTTGCTACTTAACTGAACAAACATCTCACCACCCTCCGGTTTCTGCC
TTTTTTATAGACTGCCCGGATACAGGGGTCTCTGCGCGTGGTTTTGACCA
GATCAGTGCCAAGTTCACAGGCACCAGCATCCGGGTCGCTCCTGGCCAGC
ACAACCTGGGAATCTTCGTCAACTTGAAAAACAGAGATAATGAGGAATAC
CACTTGACCCATCCTGCAGCACACCTTGGTGGTCTCCTCAGAGGCGCTTT
GGCGATCTCTGTCTCAGACACTTGTTACATTACTTGCGCCAAGACGCGCA
TCAAAGTCATTTTACAGTACTTGGAGGAGGGCTGGATTGGTCGAGCGCAG
AATAAGGTTGAGGGTGTGATCTTTCGATACGATCCGGATAAGGACGTCAC
CACGAGAATCAAAGATGTACCCGAAGGCGATGTTCTTGCCCGGATCAGCG
GTTCTTGGCATGGGCAAGTTTTCTACACGTTGGCCGGTACAAACGAACCT
CGGCTTTTGATCGATGTCACACCCCTCTTCCCAGTCGCGAAGACGCTGCC
TCCGGAAGAGAGTCAACTATCCAACGAATCCCGCAAATTTTGGTCTTCGG
TTACCGAAGCTATCGTCGACAAAAAGTACGGCCAGGCTACCAAGCTCAAA
CAAGACATCGAAGAGCGACAACGGCAAAAGGCCGCAGAGCGTCAGAACAA
GAACGAAACGTGGCAGCCTCGTTTCTTCACCGGCGCTGTCACGCCTTTGG
GAAGACCTGAGCTAACAGATGAAGGGCTGAAGGTACTCGATGGGCTACGC
AGCGGTGATTATAGGTTGGACGAGAGTCTTACAAAGGGTGCATAGATGTC
TTCCACTTCAGCCCAAGAAATCCCTGAGAAGGCACCTGATGATTCTTCCA
AGCTGAAGACTTTCTTGTCCATCCTCCGCAAGTTCGTCGGAGTGGCCGAC
ATCGCGTCTGTTCGTTTCTCGTTGCCAGCGCATCTTCTAGAACCCACGCC
AAATCTGGAATATTGGAATTACCTAGACAGACCGGAGGCCTTCGCAAGCA
TTGGTCAATCGGAAGATCCGCTGGGACGCACGCTGGAGGTTCTGAGATTC
TGGTTTACCAAGGACTTGAAATACATCAAAGGCAAACCATGCAAGCCGTA
CAATTCTACATTGGGGGAATTTTTCAGATGCACCTGGGAAGTAGATCAGA
CGCTCCCAGAAGTCTCGCCGACTCCAAAAGCTTTCTCCAACGCAAAGGAC
AGCAGCACAGATCCCGTCAAGATTTGCTACTTAACTGAACAAACATCTCA
CCACCCTCCGGTTTCTGCCTTTTTTATAGACTGCCCGGATACAGGGGTCT
CTGCGCGTGGTTTTGACCAGATCAGTGCCAAGTTCACAGGCACCAGCATC
CGGGTCGCTCCTGGCCAGCACAACCTGGGAATCTTCGTCAACTTGAAAAA
CAGAGATAATGAGGAATACCACTTGACCCATCCTGCAGCACACCTTGGTG
GTCTCCTCAGAGGCGCTTTGGCGATCTCTGTCTCAGACACTTGTTACATT
ACTTGCGCCAAGACGCGCATCAAAGTCATTTTACAGTACTTGGAGGAGGG
CTGGATTGGTCGAGCGCAGAATAAGGTTGAGGGTGTGATCTTTCGATACG
ATCCGGATAAGGACGTCACCACGAGAATCAAAGATGTACCCGAAGGCGAT
GTTCTTGCCCGGATCAGCGGTTCTTGGCATGGGCAAGTTTTCTACACGTT
GGCCGGTACAAACGAACCTCGGCTTTTGATCGATGTCACACCCCTCTTCC
CAGTCGCGAAGACGCTGCCTCCGGAAGAGAGTCAACTATCCAACGAATCC
CGCAAATTTTGGTCTTCGGTTACCGAAGCTATCGTCGACAAAAAGTACGG
CCAGGCTACCAAGCTCAAACAAGACATCGAAGAGCGACAACGGCAAAAGG
CCGCAGAGCGTCAGAACAAGAACGAAACGTGGCAGCCTCGTTTCTTCACC
GGCGCTGTCACGCCTTTGGGAAGACCTGAGCTAACAGATGAAGGGCTGAA
GGTACTCGATGGGCTACGCAGCGGTGATTATAGGTTGGACGAGAGTCTTA
CAAAGGGTGCATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001951-T1.utr5p1 | KJC3_001951-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037239 |
| DBxref | InterPro:IPR018494 |
| DBxref | InterPro:IPR000648 |
| DBxref | PFAM:PF01237 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1240425..1242956 + |
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