You are here

Home

KJC3_001954-T1, KJC3_001954-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001954-T1
Unique NameKJC3_001954-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1250519..1251508-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001954-T1 ID=KJC3_001954-T1|Name=KJC3_001954-T1|organism=Aspergillus niger KJC3|type=mRNA|length=990bp|location=Sequence derived from alignment at ch2:1250519..1251508- (Aspergillus niger KJC3)
ATGAGGATCCGGATTCGCGGTCCGGCGGGACAATCCACCGTCACGCTGGA
TGCAGATGCAACTGTCGACGACCTCCGGCATCAGATCACGGAGAAAACGG
GGCTGACGGCGTACGATGTAAAATATGGATATCCAAATATCAAGCCATTG
GTGCTGGGCGGGCTTCCTTCGAATCAGAAACTAGCGGATCTAGATATCAC
CCTAAACGGGGAACAACTTATCGTCACACAGCATGAGAACTCAGCCCAGT
CCCCGATCAAAAGTGAACCTCAAGCAGCAAATCCTCTGTTGAAAGCGCCA
GCTGTAAGCAGCACACCGAAGAAGGGTTCTCCTGATGATCCGCCGGAGGT
CCCTTCGCCCGACCATAGCGGAACCTTTGTTCTCCGAATCATGCCCGATG
ACAACTCTTGTCTCTTTCGTGCAGTGAGTAGTGCAACTATGGGAGGAGTA
GATGCCATGACCGAACTACGATCCGTTGTTGCGCAAACAATTCAAGCGCA
CCCAGACATCTATACCGAGGCGGTATTGGAGAAAAAGCCGGACGAATACT
GCCGCTGGATTCAGAATGAGGACTCATGGGGTGGTGGAATCGAGCTGAGC
ATCCTCAGCAAGCATTTCGATATTGAAATATGCTCCATAGACGTGCAGAC
CCTTCGCATCGATCGCTTCAACGAAGGCGCCCCGATGCGGTGTATCGTGG
TTTATTCAGGAATCCACTACGATACAATTGCGTTGTCGCCTTCCAGCCCG
CCTTATACTCACTCAGATGTGCCTCCTGACTTTGATACCAAAGTCTTCGA
CGCTGCAGATCCATTGGTCCTTGAGAAGTCGCAGGAACTCTGCCAAGTCC
TGCAATCTAGGCATTACTACACTGACACAGCTGGGTTTCGTCTTCGTTGC
AATACGTGTGGAGGGACATTCGTCGGAGAGAGAGGTGCTACACAGCATGC
CGAACAAACAGGGCATGTTGATTTCGGCGAGGCTGGCTGA
back to top

Coding sequence (CDS) from alignment at ch2:1250519..1251508-

>KJC3_001954-T1 ID=KJC3_001954-T1|Name=KJC3_001954-T1|organism=Aspergillus niger KJC3|type=CDS|length=990bp|location=Sequence derived from alignment at ch2:1250519..1251508- (Aspergillus niger KJC3)
ATGAGGATCCGGATTCGCGGTCCGGCGGGACAATCCACCGTCACGCTGGA
TGCAGATGCAACTGTCGACGACCTCCGGCATCAGATCACGGAGAAAACGG
GGCTGACGGCGTACGATGTAAAATATGGATATCCAAATATCAAGCCATTG
GTGCTGGGCGGGCTTCCTTCGAATCAGAAACTAGCGGATCTAGATATCAC
CCTAAACGGGGAACAACTTATCGTCACACAGCATGAGAACTCAGCCCAGT
CCCCGATCAAAAGTGAACCTCAAGCAGCAAATCCTCTGTTGAAAGCGCCA
GCTGTAAGCAGCACACCGAAGAAGGGTTCTCCTGATGATCCGCCGGAGGT
CCCTTCGCCCGACCATAGCGGAACCTTTGTTCTCCGAATCATGCCCGATG
ACAACTCTTGTCTCTTTCGTGCAGTGAGTAGTGCAACTATGGGAGGAGTA
GATGCCATGACCGAACTACGATCCGTTGTTGCGCAAACAATTCAAGCGCA
CCCAGACATCTATACCGAGGCGGTATTGGAGAAAAAGCCGGACGAATACT
GCCGCTGGATTCAGAATGAGGACTCATGGGGTGGTGGAATCGAGCTGAGC
ATCCTCAGCAAGCATTTCGATATTGAAATATGCTCCATAGACGTGCAGAC
CCTTCGCATCGATCGCTTCAACGAAGGCGCCCCGATGCGGTGTATCGTGG
TTTATTCAGGAATCCACTACGATACAATTGCGTTGTCGCCTTCCAGCCCG
CCTTATACTCACTCAGATGTGCCTCCTGACTTTGATACCAAAGTCTTCGA
CGCTGCAGATCCATTGGTCCTTGAGAAGTCGCAGGAACTCTGCCAAGTCC
TGCAATCTAGGCATTACTACACTGACACAGCTGGGTTTCGTCTTCGTTGC
AATACGTGTGGAGGGACATTCGTCGGAGAGAGAGGTGCTACACAGCATGC
CGAACAAACAGGGCATGTTGATTTCGGCGAGGCTGGCTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001954KJC3_001954Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001954-T1.cdsKJC3_001954-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001954-T1.exon1KJC3_001954-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001954-T1KJC3_001954-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263S1E
NoteMEROPS:MER0116559
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR003323
DBxrefPFAM:PF02338
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1250519..1251508 -
Powered by Drupal