KJC3_001963-T1, KJC3_001963-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_001963-T1
Unique Name	KJC3_001963-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch2:1280257..1281831-
coding sequence from alignment at ch2:1280257..1281831-

mRNA from alignment at ch2:1280257..1281831-

Legend: CDSpolypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_001963-T1 ID=KJC3_001963-T1|Name=KJC3_001963-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1575bp|location=Sequence derived from alignment at ch2:1280257..1281831- (Aspergillus niger KJC3)
ATGCGCGTTCTTCGCCCCTCCAAACACCATTTCCTCTCTTCCTCTTCCTC
GTCGCTTGCCGCTTATTTGGCCCCCTCTATATCCTATCCGCTGAAGCCGC
GATACTTCCACCAAACCCGTTCGTCCCCCAAGGATCCGGCAATTTTCAAA
AATAGTCTGCAAAAAACCCTCGAAGCCCACCGTTCCTCGAATCGAGCTAG
TTTAATTCGCAGGATACCGACTAAACCAGACCATTCTGAATCGTCACCTG
CAGAGGTTGCAAGCGGCGATGGGTCATCAAACGATTCATCCACCGCGGAT
GTAACTCTGGGCCAGTCTTCCTCGACCCCAAGAGGCTCGAAGAGGAGACT
TCGCTCCATTCAGAAGTCCTATCAACCGCCTCGGACTACTTACGCACCTC
AGCTGATACACTGGGATGCTGATCCTAAAAGGGGCCGGTCAGTTCAATGT
CCATGGTTGGATGACTTGGACTCAACTCGGCCCTTCAGTGACGGCCTCTC
CCAGCTCGATGCGGAGATCAAGGCACTTGAAAAATACCTCAGTCCGAGCC
CACCAGAGGAGGAGAGCGTTCATCGGATAACCGCGCATATAGCTGGTCTT
TTGGAAGGGACTGCGCCCCGTGCCCCCTGTATCATCGGATCATGGCGAAC
CGGGTTAGCCATGAGCCACTCCCATCTGGACCTTCTTCTCCCCGTCCCAG
ACTCAATACGGTCGAACGAACTTGTTCGGAAACCAAGCGCCACGCGTCCG
CAGATTCTCACTCAGCATAAGCGCCTGCTCCGAGGTGTTGAACAGATTTT
CCAGGAATGCCAATCCTTCAGCAACAACATCACCTACCCATTTACCACCG
TCCATCACGAGACGGGTCTCCGCGTACGCTTCTACTGCGGAGAAGACATA
CCTCCCATGGTCGAGTACATCCAGGACTACTGTGCCGAATACCCCTCCGT
CCGACCTCTCTACATGGCCGTGCGACTCCTCCTCGAATCCCAAGGCCTAT
GTGGCCAGGGTCCGAGATCTCTCAAACCCGAAGCCCTGGTCATGCTCATT
GTAGCGTTCCTAAAGCTGAACCACGGCAAGTTCCAGCGACCCGACGGCCT
AGGCGAGCGCCTCCTCGCCTTTCTCCAAATGTATGGCACCGACGTCGATC
TCACGACGACCGGAATTGCCGTCGATCCTCCGAGTACTTTTGATGCAGAC
ACCATTCGCTCCGCCAGCCGAATGTTCTCAAGTGAGCCGGACGAGGTCCC
CGCCCATTTGCGCGGTCAGCGAGCCATCATCAATATGAAGAAATCCGCCG
TGTCCATGGGCAACACAGCCGCGGCTACACGGCTATGTCTGCAGAACCCC
ACTAATTATCTGGATGACTTGGGCCGTTCTTGTCTTGATACCCCACAGCT
GCAGGTGGCGTTTGCGCGCGCTCACGGGCGTCTTCGTATGGCTCTCAAAC
ATTGGGAGCAGTGCGCGCCTGTCACTCTGGATCACAGTCTGCTGAACTCG
ATCTTGCAGGTAAATTTTGATGACTTTAATCAAGTGCGCGACCGGCTTAC
TGTCGGGACGGTCGATCCCACGTGA

Coding sequence (CDS) from alignment at ch2:1280257..1281831-

>KJC3_001963-T1 ID=KJC3_001963-T1|Name=KJC3_001963-T1|organism=Aspergillus niger KJC3|type=CDS|length=1575bp|location=Sequence derived from alignment at ch2:1280257..1281831- (Aspergillus niger KJC3)
ATGCGCGTTCTTCGCCCCTCCAAACACCATTTCCTCTCTTCCTCTTCCTC
GTCGCTTGCCGCTTATTTGGCCCCCTCTATATCCTATCCGCTGAAGCCGC
GATACTTCCACCAAACCCGTTCGTCCCCCAAGGATCCGGCAATTTTCAAA
AATAGTCTGCAAAAAACCCTCGAAGCCCACCGTTCCTCGAATCGAGCTAG
TTTAATTCGCAGGATACCGACTAAACCAGACCATTCTGAATCGTCACCTG
CAGAGGTTGCAAGCGGCGATGGGTCATCAAACGATTCATCCACCGCGGAT
GTAACTCTGGGCCAGTCTTCCTCGACCCCAAGAGGCTCGAAGAGGAGACT
TCGCTCCATTCAGAAGTCCTATCAACCGCCTCGGACTACTTACGCACCTC
AGCTGATACACTGGGATGCTGATCCTAAAAGGGGCCGGTCAGTTCAATGT
CCATGGTTGGATGACTTGGACTCAACTCGGCCCTTCAGTGACGGCCTCTC
CCAGCTCGATGCGGAGATCAAGGCACTTGAAAAATACCTCAGTCCGAGCC
CACCAGAGGAGGAGAGCGTTCATCGGATAACCGCGCATATAGCTGGTCTT
TTGGAAGGGACTGCGCCCCGTGCCCCCTGTATCATCGGATCATGGCGAAC
CGGGTTAGCCATGAGCCACTCCCATCTGGACCTTCTTCTCCCCGTCCCAG
ACTCAATACGGTCGAACGAACTTGTTCGGAAACCAAGCGCCACGCGTCCG
CAGATTCTCACTCAGCATAAGCGCCTGCTCCGAGGTGTTGAACAGATTTT
CCAGGAATGCCAATCCTTCAGCAACAACATCACCTACCCATTTACCACCG
TCCATCACGAGACGGGTCTCCGCGTACGCTTCTACTGCGGAGAAGACATA
CCTCCCATGGTCGAGTACATCCAGGACTACTGTGCCGAATACCCCTCCGT
CCGACCTCTCTACATGGCCGTGCGACTCCTCCTCGAATCCCAAGGCCTAT
GTGGCCAGGGTCCGAGATCTCTCAAACCCGAAGCCCTGGTCATGCTCATT
GTAGCGTTCCTAAAGCTGAACCACGGCAAGTTCCAGCGACCCGACGGCCT
AGGCGAGCGCCTCCTCGCCTTTCTCCAAATGTATGGCACCGACGTCGATC
TCACGACGACCGGAATTGCCGTCGATCCTCCGAGTACTTTTGATGCAGAC
ACCATTCGCTCCGCCAGCCGAATGTTCTCAAGTGAGCCGGACGAGGTCCC
CGCCCATTTGCGCGGTCAGCGAGCCATCATCAATATGAAGAAATCCGCCG
TGTCCATGGGCAACACAGCCGCGGCTACACGGCTATGTCTGCAGAACCCC
ACTAATTATCTGGATGACTTGGGCCGTTCTTGTCTTGATACCCCACAGCT
GCAGGTGGCGTTTGCGCGCGCTCACGGGCGTCTTCGTATGGCTCTCAAAC
ATTGGGAGCAGTGCGCGCCTGTCACTCTGGATCACAGTCTGCTGAACTCG
ATCTTGCAGGTAAATTTTGATGACTTTAATCAAGTGCGCGACCGGCTTAC
TGTCGGGACGGTCGATCCCACGTGA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_001963	KJC3_001963	Aspergillus niger KJC3	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001963-T1.cds	KJC3_001963-T1.cds	Aspergillus niger KJC3	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001963-T1.exon1	KJC3_001963-T1.exon1	Aspergillus niger KJC3	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_001963-T1	KJC3_001963-T1-protein	Aspergillus niger KJC3	polypeptide

Properties


Property Name	Value
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch2	supercontig	ch2:1280257..1281831 -

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KJC3_001963-T1, KJC3_001963-T1 (mRNA) Aspergillus niger KJC3