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KJC3_001965-T1, KJC3_001965-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001965-T1
Unique NameKJC3_001965-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1288534..1291196+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001965-T1 ID=KJC3_001965-T1|Name=KJC3_001965-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2663bp|location=Sequence derived from alignment at ch2:1288534..1291196+ (Aspergillus niger KJC3)
CGGCAGTATCTCTCCTATTGCTTTCTCTTCTTCTTCTTCTTCTTCTTCTT
CCTCTCCCTCTCTCTCTTCTTCTCTATCTTTTGACAACGCCTCCTCACTT
GTTCATCTATCCAGGGATGACCCATCACATCGGCAATGGTATTCCCCTCC
CCCCAACCAGCTAAATAGCTCGAATGGCGGGGAGGGGTTCCACCTGCCAA
TTTCCCCAATCCCAGCAAGGATCCTGGAGCCCCGGGTTTTGGGACCGTGG
TGCACCATGACAATAGGGCGTCGAAGTAACCCGGCCTAACTATCGACAAG
GTATTCCGACTGTCGCTTGCTGTTGGATCCCAACCTGATCGTCCTCGTTC
TTTAGCCGATTCGGCACGACATTGCCGACCTTCCTCCCCGCCATGATGGC
GGTTTGGCTTTCGGCCTTCTTTGCGAGCCGTCCAAGCCCTAGCTGATTTT
CTAGTCTTACTTCGCTTCCTGACTCACGCGGCGTATCCGTCGTTCCTTTA
TCTATCTAAATTTTTACAAGGTTGATCCTCAAAAAGTCCTTGGCAGAAAG
ACGCTTCCAACACTGCTACAACCAATTGCCGCCGATGCCGTCTGCTGGAC
GCTCCTTGAGTCATACGCACATATCAACTCGCTTGATCTCTGTCAAGTCG
ACAGCTGGGGCATCGATGCATACCTCATAGTGCCTGATCCTTGACCGTTT
CTTTCTTTGTCCCCCTTCTGTTCCAGATCCCAATCCCACTTCGCGTTGAT
CAGTTACGTGCGCGCCATCACTTCGATTGATTGCCTCCACAATCCAGAGT
GTCCTTGCCATCCCATTTGGTCTTGCATAAGCCAAGTAAGAAAAAGAAGC
TGAGTAACTAGCAGACTGGCTGGCTCATCTCCCCACTGGTGTCTACCTGC
TTCCACTTACTCGGAAGCATCAGAATAACCGTTTGAAATACACGAGACTT
CAAACAGAACCCTTTCGAAAATCTGTGATATCCCTTCGGGATATACTTTC
CCACAAAATGGCCGCTAGATCATCGCATGACACCCAACAGGACTTGGCCA
TCTCCACAGATGATGAGAAAGGTGGATCCAGCCAGGCTGCCAACGCTCCC
GTCCCTGACCGATTCCTTCCGCTAGGGAATGAGAAGGGCGATGAAGAAGT
AGCCCTCGGCCCCGAAGCACAGAAGCAGTTGTCGAAAACCCCGACCAATG
TTAGCCATGTTGGCGCACTGGCCAGTAGAACCTTGACCCTAGTCCGCACC
AGGGAGTCTGGAAGGGACCTGGGACCTCCCCCCGATGGTGGCTTCAAGGC
ATGGTCTCAAGTAGCCTTGGCTCATTTCGTCATCTTCAACACCTGGGGCT
ACATCAATAGTTTTGGTGTGTTCCAAACCTACTATACCGAGACGCTAGGT
CGCACCCCGTCCGATATCTCCTGGGTAGGCAGTATCCAGATCTTCTTACT
CTTCTTTGTCGGCACCTTCTCTGGACGCGCAACCGACGCCGGGTATTTCA
AAGCCATTTTGACCGTGGGGGCTGTCCTGGAGTTGTTTTGCATCTTTATG
ACCTCCCTGTGCACGCAGTACTGGCAGCTGTTCCTGGCTCAGGGCGTTGG
TCAGGGCATCGGTTGTGGACTGATGTTCTGCCCGACCATTGCGCTGATGC
CGACCTACTTTACCAAAAACCGAGCGATTGCGATCGGAATCGTGGCCTCG
GGCTCTGCCACTGGCGGCCTGGTCTTCCCAGCGGTCGTCATGCGACTCCT
ACCTCGGATCGGGTATGGCTGGACCATGCGGACCCTGGGGTTCATCTCAT
TGGCGACGCTGATTCCATGCTTGGTGTTTCTCCAGCAACGACTGCCTCCG
CGTCGCAGCGGACCGCTCGTCGAATGGGGGGCGTTCAAGGAGGCGCCCTA
TGCGTTGTTCGCCCTGGGGATGTTCCTCAACTTCTGGGGTCTCTATGTAG
GGTTCTTCTACATTGGGAGCTTCGCCCGCAACATCATTGGGGTATCCAAC
TCGACGTCGATCGACGTACTTCTAGTCATGAACGGCATTGGTCTGCTGGG
CCGGTTGATCCCCAACCTGATGGCCGACCGGTATACGGGACCCTTGAACA
TGTTGATCCCCTTCAGTCTGGTGACGGGAGTGGTGGCATTCTGCTGGGCT
GCGGTTCACACTTACGACGAGATGTATGCCTTCAGTGCGTTCTATGGGCT
GGCGGCAGCGGGAATCCAGTCGCTCTTCCCGGCCACCCTGAGCACGCTCA
CCACGGATTTAAAGAAGACAGGAGTGAGAATGGGCATGGTGCTCAGTGTA
GTGGCTGTGGCTGCGCTGATCGGCACCCCGATCGCCGGGGCACTGGTCGA
TCGGGATGATGGACAATATCTGTATGCGCAGATGTTCATGGGCAGTGCCA
TTCTGGCGGGGACGCTGACCTTAATTGCCGCGAGAGTGACGAAGCTGGGG
CTGACCTGGCAACGAGCATAGGCAGGATGACTGCTGAATGGGGAGAAGGG
GAAGATGAGCCAACTGTACATACAGTAGAAATCACAGTAAAGCAGTAGAT
AAAGGAGTAACCAAGAAAATACTTCTGAGATGGCATGATGATCACACCAA
TGAACGAGCGCGCCTTAGTCAGGCTCTCCGCCTGGTCTGGGCAACTGGCG
GCGTGACTCAAAG
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Coding sequence (CDS) from alignment at ch2:1288534..1291196+

>KJC3_001965-T1 ID=KJC3_001965-T1|Name=KJC3_001965-T1|organism=Aspergillus niger KJC3|type=CDS|length=1464bp|location=Sequence derived from alignment at ch2:1288534..1291196+ (Aspergillus niger KJC3)
ATGGCCGCTAGATCATCGCATGACACCCAACAGGACTTGGCCATCTCCAC
AGATGATGAGAAAGGTGGATCCAGCCAGGCTGCCAACGCTCCCGTCCCTG
ACCGATTCCTTCCGCTAGGGAATGAGAAGGGCGATGAAGAAGTAGCCCTC
GGCCCCGAAGCACAGAAGCAGTTGTCGAAAACCCCGACCAATGTTAGCCA
TGTTGGCGCACTGGCCAGTAGAACCTTGACCCTAGTCCGCACCAGGGAGT
CTGGAAGGGACCTGGGACCTCCCCCCGATGGTGGCTTCAAGGCATGGTCT
CAAGTAGCCTTGGCTCATTTCGTCATCTTCAACACCTGGGGCTACATCAA
TAGTTTTGGTGTGTTCCAAACCTACTATACCGAGACGCTAGGTCGCACCC
CGTCCGATATCTCCTGGGTAGGCAGTATCCAGATCTTCTTACTCTTCTTT
GTCGGCACCTTCTCTGGACGCGCAACCGACGCCGGGTATTTCAAAGCCAT
TTTGACCGTGGGGGCTGTCCTGGAGTTGTTTTGCATCTTTATGACCTCCC
TGTGCACGCAGTACTGGCAGCTGTTCCTGGCTCAGGGCGTTGGTCAGGGC
ATCGGTTGTGGACTGATGTTCTGCCCGACCATTGCGCTGATGCCGACCTA
CTTTACCAAAAACCGAGCGATTGCGATCGGAATCGTGGCCTCGGGCTCTG
CCACTGGCGGCCTGGTCTTCCCAGCGGTCGTCATGCGACTCCTACCTCGG
ATCGGGTATGGCTGGACCATGCGGACCCTGGGGTTCATCTCATTGGCGAC
GCTGATTCCATGCTTGGTGTTTCTCCAGCAACGACTGCCTCCGCGTCGCA
GCGGACCGCTCGTCGAATGGGGGGCGTTCAAGGAGGCGCCCTATGCGTTG
TTCGCCCTGGGGATGTTCCTCAACTTCTGGGGTCTCTATGTAGGGTTCTT
CTACATTGGGAGCTTCGCCCGCAACATCATTGGGGTATCCAACTCGACGT
CGATCGACGTACTTCTAGTCATGAACGGCATTGGTCTGCTGGGCCGGTTG
ATCCCCAACCTGATGGCCGACCGGTATACGGGACCCTTGAACATGTTGAT
CCCCTTCAGTCTGGTGACGGGAGTGGTGGCATTCTGCTGGGCTGCGGTTC
ACACTTACGACGAGATGTATGCCTTCAGTGCGTTCTATGGGCTGGCGGCA
GCGGGAATCCAGTCGCTCTTCCCGGCCACCCTGAGCACGCTCACCACGGA
TTTAAAGAAGACAGGAGTGAGAATGGGCATGGTGCTCAGTGTAGTGGCTG
TGGCTGCGCTGATCGGCACCCCGATCGCCGGGGCACTGGTCGATCGGGAT
GATGGACAATATCTGTATGCGCAGATGTTCATGGGCAGTGCCATTCTGGC
GGGGACGCTGACCTTAATTGCCGCGAGAGTGACGAAGCTGGGGCTGACCT
GGCAACGAGCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001965KJC3_001965Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001965-T1.utr5p1KJC3_001965-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001965-T1.exon1KJC3_001965-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001965-T1.cdsKJC3_001965-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001965-T1.utr3p1KJC3_001965-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001965-T1KJC3_001965-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1288534..1291196 +
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