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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1293008..1295546- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001967-T1 ID=KJC3_001967-T1|Name=KJC3_001967-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2539bp|location=Sequence derived from alignment at ch2:1293008..1295546- (Aspergillus niger KJC3)
GCGTTCACTAGTTGCGGGTCTAGAGTCCGTCGCGATAGTCAAGAGTCAGT
TCTCAGGGGCATGCATCCAAGTTCCTGCAGGTTCAATCTTCCAGCTTGCG
AGTTCGGTCTCCCTTTTTCTCCCCCTAACCCACATCAAACTATCTACGTC
TTTATTCTTTCCGTTCAATATGTGGATGCTGACAGGTTTGGATCAGAACT
ACTGTACTATTAGTTATCAGAGGACGATCCGGGAGAGTTGTCTTGCAGCT
TGCATGGTTCCATTGGGGAGGGTCCTGCTATTATTCCCAGTCCCAGTCAA
TTGACTGCCATCAAGTGGAGCCAGTTACTCCGTACTTCCTCAGTTCCTAC
TGGATCGAGTGGAAACGGGCCGTCATGCACCCCCCCGATCGATAATATCT
ATCATTTCATGGGAAACTGATTCCCTGTCCGGTCCATGCTCCAGTCTTCC
GTGACCCATCGCAAAGCTCCATCGCACCCAAGGTAGGGCAGCGACCGAAT
TTGTCAGTATGCTGGAGATGGATCAAGTTGGATCAAGGATGGCTTCTGCG
ATCAGGCCAGCTTGGGGGCTTCTGCATCAATTTTCACCACGCATCTTTTT
TCTTCCCTCGTTGCCGGAGATTTACTCATACTGCTGACTGCATCTACAGT
CTCCATATCCAGTCACATACATACAGGATGGTGGTCATGCCCACCTTCCG
GGTTTCGGAGCTGGGGCATTCTGTCGCCCGAATGTCAGTCAAATGTAAGC
CATGCATGAGAAAAATAGAATAAAATAAAATAAAATGAATAAATTAAGGA
GCAGCTCCTGTCCTCAACAGGCAATCCTCGCAATGTGATACATCGCCGTT
TCCTGGCGGTTCTAGTGCCGCCAGGCACTTGATACACCGGCGTTCAGGGA
CGATCATCTACGGGGATGGCATGGCTCTCATGTTTCATCAGCCAGCCAGC
CAGCAGATAGACTAGACTAGATGTTTCCCAGATAGTATTTCCACCCTCCG
GCAGTCCAAAGTGTTAACTTAATTCTTGGTGTCTCTGATGATTCTGCCGC
CATCCACCGATCGGACTTCCGGGATAGAGTTGATCCGGGAGTTGGGCCGA
AGAGGCTGATGACATAACCCAACGGCCACTCCATCATCATCAACAAGCAA
AGCAATCAATAACTCCATTCGCTAATAGATCCGTAATTGTCACCCCCATC
CAACACCACCTCAATCAATCAAAAACCCCCCTGGGTCCGTTAGAGGTAGT
GGGTACATGACATCCGTGCCTCTCCCTCCCATGTCCGAAGACCTGGGGTT
CCCCTTATCAACTCATTGAAGATGAATCCTCACATCTCCGTCCCCCGCCA
ACATGCCAGCCCGGCCAGCTTCGGCGGCACCACCCCAGCAAGCCGCGGGT
CTAGTATCCGCATGCCGCGATTCTTCAAGAGGTAGGCTACTTCCACCCCC
TTCTGGGACTTTTGGGGTCATTGGAGGGCATGATACGTCTATAAAACGGA
CATCCATGGCCTTTTCTGATCCTCATCGACCGGCTACTGATGCCCCTGGC
TGGCTTACAGGTTGTTCAAGTTCCCGCAAATGGACTTTGAGATGGCGATC
TGGGAAATGACATCTTTGTTGATTGCGCCAAAGAAGGTCTTCAAGTCAAT
CTATTACCATGTGAGTTGATAACGGCCTCCTGCTCCATAGTGCGCATCTG
GTTATGCTGACCCAAGCTTCACCGCAGAAACGTATGTCATCGCCTGACAC
CGCACCTTGCCGTTCTGGCCCGCTTTTCCGGAATCCTACACACACCCGTC
GATTCCTATACTGATGGCCTCGTACAGAAACGAAAAACACCTGGCACCGT
CCGGATCCCTCGTTCACCTACCTCCTCTCTTTCTTCCTCCTGCTCACTGC
CCTCGCCTGGGGCCTCGCGTATGCGCCCTCCTTCGGCGCCATTGTCCGGC
TCTCGCTGCTCTTTATCTTCGTTCACTTCATCGGCTCGTCCTTGCTGGTC
TCGACAGTCGGGTACTTTACGATCCCACGGTTATTCGGGCCCGATGGCGC
AGCCGCATCGCTGACGGGATTCCGCGGCGGTCGTGGACGGAGACGCGGCG
CGGCGCAAGGCCTGTTCACGCAGCCGGGCGAGAAGGACCAGCTTGAGTTC
GGATACTGCTTTGATGTAAGTGACACACTTTCACAGCATACTGGGACATA
GCAGCACCGGCTAATCGCAGACATCAGGTATCGAATCGGGCATTCTTCCC
TCTGTATCTACATCTCTACGTGGTCCAGTTCCTGCTCCTCCCGCTGCTCC
AGCGCAGCCCGAGCAACTTCCTGGCCACTTTCCTCGGAAACACCCTTTAC
TTGTCGGCCATAACTTACTACACCTACATCACATTTCTCGGATACAATGC
GCTTCCGTTCCTCCACAACACGGAGCTTCTGCTGCTCCCCATCCTGGCAT
TTGCAGTGCTGTGGCTGGTGAGCCTGATTGCGGGATGGGGGATAGTGGCG
CAAGGCCGGGGAGTGGAAGGACTGTTCTGGGGCGCATGA back to topCoding sequence (CDS) from alignment at ch2:1293008..1295546- >KJC3_001967-T1 ID=KJC3_001967-T1|Name=KJC3_001967-T1|organism=Aspergillus niger KJC3|type=CDS|length=4320bp|location=Sequence derived from alignment at ch2:1293008..1295546- (Aspergillus niger KJC3)
GTATCGAATCGGGCATTCTTCCCTCTGTATCTACATCTCTACGTGGTCCA
GTTCCTGCTCCTCCCGCTGCTCCAGCGCAGCCCGAGCAACTTCCTGGCCA
CTTTCCTCGGAAACACCCTTTACTTGTCGGCCATAACTTACTACACCTAC
ATCACATTTCTCGGATACAATGCGCTTCCGTTCCTCCACAACACGGAGCT
TCTGCTGCTCCCCATCCTGGCATTTGCAGTGCTGTGGCTGGTGAGCCTGA
TTGCGGGATGGGGGATAGTGGCGCAAGGCCGGGGAGTGGAAGGACTGTTC
TGGGGCGCATGAAAACGAAAAACACCTGGCACCGTCCGGATCCCTCGTTC
ACCTACCTCCTCTCTTTCTTCCTCCTGCTCACTGCCCTCGCCTGGGGCCT
CGCGTATGCGCCCTCCTTCGGCGCCATTGTCCGGCTCTCGCTGCTCTTTA
TCTTCGTTCACTTCATCGGCTCGTCCTTGCTGGTCTCGACAGTCGGGTAC
TTTACGATCCCACGGTTATTCGGGCCCGATGGCGCAGCCGCATCGCTGAC
GGGATTCCGCGGCGGTCGTGGACGGAGACGCGGCGCGGCGCAAGGCCTGT
TCACGCAGCCGGGCGAGAAGGACCAGCTTGAGTTCGGATACTGCTTTGAT
AAACGTTGTTCAAGTTCCCGCAAATGGACTTTGAGATGGCGATCTGGGAA
ATGACATCTTTGTTGATTGCGCCAAAGAAGGTCTTCAAGTCAATCTATTA
CCATATGAATCCTCACATCTCCGTCCCCCGCCAACATGCCAGCCCGGCCA
GCTTCGGCGGCACCACCCCAGCAAGCCGCGGGTCTAGTATCCGCATGCCG
CGATTCTTCAAGAGGTATCGAATCGGGCATTCTTCCCTCTGTATCTACAT
CTCTACGTGGTCCAGTTCCTGCTCCTCCCGCTGCTCCAGCGCAGCCCGAG
CAACTTCCTGGCCACTTTCCTCGGAAACACCCTTTACTTGTCGGCCATAA
CTTACTACACCTACATCACATTTCTCGGATACAATGCGCTTCCGTTCCTC
CACAACACGGAGCTTCTGCTGCTCCCCATCCTGGCATTTGCAGTGCTGTG
GCTGGTGAGCCTGATTGCGGGATGGGGGATAGTGGCGCAAGGCCGGGGAG
TGGAAGGACTGTTCTGGGGCGCATGAAAACGAAAAACACCTGGCACCGTC
CGGATCCCTCGTTCACCTACCTCCTCTCTTTCTTCCTCCTGCTCACTGCC
CTCGCCTGGGGCCTCGCGTATGCGCCCTCCTTCGGCGCCATTGTCCGGCT
CTCGCTGCTCTTTATCTTCGTTCACTTCATCGGCTCGTCCTTGCTGGTCT
CGACAGTCGGGTACTTTACGATCCCACGGTTATTCGGGCCCGATGGCGCA
GCCGCATCGCTGACGGGATTCCGCGGCGGTCGTGGACGGAGACGCGGCGC
GGCGCAAGGCCTGTTCACGCAGCCGGGCGAGAAGGACCAGCTTGAGTTCG
GATACTGCTTTGATAAACGTTGTTCAAGTTCCCGCAAATGGACTTTGAGA
TGGCGATCTGGGAAATGACATCTTTGTTGATTGCGCCAAAGAAGGTCTTC
AAGTCAATCTATTACCATATGAATCCTCACATCTCCGTCCCCCGCCAACA
TGCCAGCCCGGCCAGCTTCGGCGGCACCACCCCAGCAAGCCGCGGGTCTA
GTATCCGCATGCCGCGATTCTTCAAGAGGTATCGAATCGGGCATTCTTCC
CTCTGTATCTACATCTCTACGTGGTCCAGTTCCTGCTCCTCCCGCTGCTC
CAGCGCAGCCCGAGCAACTTCCTGGCCACTTTCCTCGGAAACACCCTTTA
CTTGTCGGCCATAACTTACTACACCTACATCACATTTCTCGGATACAATG
CGCTTCCGTTCCTCCACAACACGGAGCTTCTGCTGCTCCCCATCCTGGCA
TTTGCAGTGCTGTGGCTGGTGAGCCTGATTGCGGGATGGGGGATAGTGGC
GCAAGGCCGGGGAGTGGAAGGACTGTTCTGGGGCGCATGAAAACGAAAAA
CACCTGGCACCGTCCGGATCCCTCGTTCACCTACCTCCTCTCTTTCTTCC
TCCTGCTCACTGCCCTCGCCTGGGGCCTCGCGTATGCGCCCTCCTTCGGC
GCCATTGTCCGGCTCTCGCTGCTCTTTATCTTCGTTCACTTCATCGGCTC
GTCCTTGCTGGTCTCGACAGTCGGGTACTTTACGATCCCACGGTTATTCG
GGCCCGATGGCGCAGCCGCATCGCTGACGGGATTCCGCGGCGGTCGTGGA
CGGAGACGCGGCGCGGCGCAAGGCCTGTTCACGCAGCCGGGCGAGAAGGA
CCAGCTTGAGTTCGGATACTGCTTTGATAAACGTTGTTCAAGTTCCCGCA
AATGGACTTTGAGATGGCGATCTGGGAAATGACATCTTTGTTGATTGCGC
CAAAGAAGGTCTTCAAGTCAATCTATTACCATATGAATCCTCACATCTCC
GTCCCCCGCCAACATGCCAGCCCGGCCAGCTTCGGCGGCACCACCCCAGC
AAGCCGCGGGTCTAGTATCCGCATGCCGCGATTCTTCAAGAGGTATCGAA
TCGGGCATTCTTCCCTCTGTATCTACATCTCTACGTGGTCCAGTTCCTGC
TCCTCCCGCTGCTCCAGCGCAGCCCGAGCAACTTCCTGGCCACTTTCCTC
GGAAACACCCTTTACTTGTCGGCCATAACTTACTACACCTACATCACATT
TCTCGGATACAATGCGCTTCCGTTCCTCCACAACACGGAGCTTCTGCTGC
TCCCCATCCTGGCATTTGCAGTGCTGTGGCTGGTGAGCCTGATTGCGGGA
TGGGGGATAGTGGCGCAAGGCCGGGGAGTGGAAGGACTGTTCTGGGGCGC
ATGAAAACGAAAAACACCTGGCACCGTCCGGATCCCTCGTTCACCTACCT
CCTCTCTTTCTTCCTCCTGCTCACTGCCCTCGCCTGGGGCCTCGCGTATG
CGCCCTCCTTCGGCGCCATTGTCCGGCTCTCGCTGCTCTTTATCTTCGTT
CACTTCATCGGCTCGTCCTTGCTGGTCTCGACAGTCGGGTACTTTACGAT
CCCACGGTTATTCGGGCCCGATGGCGCAGCCGCATCGCTGACGGGATTCC
GCGGCGGTCGTGGACGGAGACGCGGCGCGGCGCAAGGCCTGTTCACGCAG
CCGGGCGAGAAGGACCAGCTTGAGTTCGGATACTGCTTTGATAAACGTTG
TTCAAGTTCCCGCAAATGGACTTTGAGATGGCGATCTGGGAAATGACATC
TTTGTTGATTGCGCCAAAGAAGGTCTTCAAGTCAATCTATTACCATATGA
ATCCTCACATCTCCGTCCCCCGCCAACATGCCAGCCCGGCCAGCTTCGGC
GGCACCACCCCAGCAAGCCGCGGGTCTAGTATCCGCATGCCGCGATTCTT
CAAGAGGTATCGAATCGGGCATTCTTCCCTCTGTATCTACATCTCTACGT
GGTCCAGTTCCTGCTCCTCCCGCTGCTCCAGCGCAGCCCGAGCAACTTCC
TGGCCACTTTCCTCGGAAACACCCTTTACTTGTCGGCCATAACTTACTAC
ACCTACATCACATTTCTCGGATACAATGCGCTTCCGTTCCTCCACAACAC
GGAGCTTCTGCTGCTCCCCATCCTGGCATTTGCAGTGCTGTGGCTGGTGA
GCCTGATTGCGGGATGGGGGATAGTGGCGCAAGGCCGGGGAGTGGAAGGA
CTGTTCTGGGGCGCATGAAAACGAAAAACACCTGGCACCGTCCGGATCCC
TCGTTCACCTACCTCCTCTCTTTCTTCCTCCTGCTCACTGCCCTCGCCTG
GGGCCTCGCGTATGCGCCCTCCTTCGGCGCCATTGTCCGGCTCTCGCTGC
TCTTTATCTTCGTTCACTTCATCGGCTCGTCCTTGCTGGTCTCGACAGTC
GGGTACTTTACGATCCCACGGTTATTCGGGCCCGATGGCGCAGCCGCATC
GCTGACGGGATTCCGCGGCGGTCGTGGACGGAGACGCGGCGCGGCGCAAG
GCCTGTTCACGCAGCCGGGCGAGAAGGACCAGCTTGAGTTCGGATACTGC
TTTGATAAACGTTGTTCAAGTTCCCGCAAATGGACTTTGAGATGGCGATC
TGGGAAATGACATCTTTGTTGATTGCGCCAAAGAAGGTCTTCAAGTCAAT
CTATTACCATATGAATCCTCACATCTCCGTCCCCCGCCAACATGCCAGCC
CGGCCAGCTTCGGCGGCACCACCCCAGCAAGCCGCGGGTCTAGTATCCGC
ATGCCGCGATTCTTCAAGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001967-T1.utr5p1 | KJC3_001967-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007881 |
| DBxref | PFAM:PF05216 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1293008..1295546 - |
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