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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1321477..1323483- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001973-T1 ID=KJC3_001973-T1|Name=KJC3_001973-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2007bp|location=Sequence derived from alignment at ch2:1321477..1323483- (Aspergillus niger KJC3)
CTCCATATTTGATTTGACAACTTACTATAAATGTTATCTAGAACAGGTAC
CAGGTACCGCACGACCCAACCCGCGTCTGCAGCATGTCGGGGTACCGGTG
ACCCTCTCTTCTCTCTCTTCGCATATTTCTCCATAGTGTTCAATCCATCC
CTTGATCTTGATGTCTTTTGACATCAACAATCAATTCTCCTAATCAATTC
TCCTGGTCCACGATGACATATTAATCTATCCTATCCTCCCTTATCAATCA
CCCATCATCCATCTTCGTCACCCAGTGATCGGCCATCCGCAATCACCGAA
ATGGACCCCCAAAGGGGCGGCGCTTCGCTCCGTCAGCGTCTGAGATTTGC
CCACGTTGGGAATCCTTCTCCCCCATTCTTTTCCCCCTTACTCCGAGTCA
GTGCTTGAAAAACTCGAGTCGCAACTTCTGCCAGATAGACTTCGTTCATA
TTTTTTTTTTATATACTCCATTAATTCACTTCGATCCTCAAACTCGGTGT
TTTGTCCGTTGGGCCAGGCCACTCTACCGATCTCTCTCTCCGCTGCCCCT
GTAACGCCCCTCTCGGGTCCTGTCGCATCTTCATCTACTTGACGCGATCT
TAAATTATCCGCGAAGGGATACACTCAAGCTCCCACCATTTGGTGGTAGG
AGAAAACCGGGTTAAACCACTAGCTTCGGGGTCAAAATTCGCTCGTTACA
CAACCTTTGACCCTCGTCTCTCTCTTTCTGTTTGTTACTACTGGACCCGC
CGTCGCGTGCGCATCCCCGACACCTCTCTATCCGCACGCCCTCACCATGG
CCGACGCCACCGACAAGATCTCTATCACCATCTGCGGCGATGGTGGATGC
GGTATGCTGTGCAACCCCATCTCTTGAACCCTCATGGTTCTTTCGTCATC
CCGGCGCAGGGACTGCGGGGCTACAAGAGGGAAGACCTTATCGCTGATGG
CCGCCAGGAAAATCATCCATCACCTTGCGCCTGGTGCGGAGCCAGTGGAT
ACATGAGTAAGTCTTGCCGTATCAATCTTGAGCATCATATGTGATCGAGG
AGTGTCCGTCATGCTAACCCAAAGCAATGTGGTAGATACGACCCTACCAT
CGGTATATACTCCTTGCTGGTCTTGCTCTAAGCTATATCCAGTCTCACAA
TTACTGACATGCGAGCGAATTGGTTGAACCGTACCAGAGGATTCATATTC
GGTTACACGCGTGGTTGATGGCGTGCCATACTTCCTATCCATCACCGACA
CGGCCGGCCAGGAGGAGTATCGCGGCTTATGGGCCGCTTCCAATCTGAGA
TCCGACGCGTTTCTTCTCGTGTACGACATCACCAACAAGTCGAGCTTAGG
CGCCTTGGACTACTTCATGGACATGATCGAGATCGAGACCGAACAACGCG
CCGAGGACAATGATCGCTTGCGCAAGGAATTGGGAGCGAGCGCAGAGGGC
CTCGACGTGGGCATGCCACCTCCGGTCAAGATCATCGCAGGGAACAAGTG
CGATCTGAAAGACAGCAGAGTCATTAGTTCCCGCGAAGGCCTGGAGTATG
CCCGAAAACACGGTTGCGGCTTCATGGAGACCAGCGCTAGGGAGATGGTC
AACATTGAGGAGACCTTTGCTCGTAAGCCTCTCACCACTATCGAGCCAGG
CATATACGTTTGCCAGAAGCTGACACTCTCGCAGTCCTAGTCCGTCGGGT
CGTCGAGGCCCGCCGACTACACTACCAGAAGGGTCCTGAGGCCACCCAAG
CGGCTCATATTGGCGAGTCTTCGACAGCTGCCAAAACCCCTGCCGACACG
GTTGTTAGCAAGGAAGGCAAGGGAGAATCGCAGAAGCGCACGCAGAAACG
ACAGAGTGGTCTTCGTGGATTCTTTGGGAAAGACAAACGTGCACGTCAGG
ATTCGGGCGAGAAGGGCCATCTCCGATCAGAGGCACCTGGGTCGGGGCAG
AACAAGCCATCCAAGCCTGCAAAGGCAAGCATATGGAAGCGCATGAGTTG
TTGTTAG back to topCoding sequence (CDS) from alignment at ch2:1321477..1323483- >KJC3_001973-T1 ID=KJC3_001973-T1|Name=KJC3_001973-T1|organism=Aspergillus niger KJC3|type=CDS|length=4395bp|location=Sequence derived from alignment at ch2:1321477..1323483- (Aspergillus niger KJC3)
TCCTAGTCCGTCGGGTCGTCGAGGCCCGCCGACTACACTACCAGAAGGGT
CCTGAGGCCACCCAAGCGGCTCATATTGGCGAGTCTTCGACAGCTGCCAA
AACCCCTGCCGACACGGTTGTTAGCAAGGAAGGCAAGGGAGAATCGCAGA
AGCGCACGCAGAAACGACAGAGTGGTCTTCGTGGATTCTTTGGGAAAGAC
AAACGTGCACGTCAGGATTCGGGCGAGAAGGGCCATCTCCGATCAGAGGC
ACCTGGGTCGGGGCAGAACAAGCCATCCAAGCCTGCAAAGGCAAGCATAT
GGAAGCGCATGAGTTGTTGTTAGAGGATTCATATTCGGTTACACGCGTGG
TTGATGGCGTGCCATACTTCCTATCCATCACCGACACGGCCGGCCAGGAG
GAGTATCGCGGCTTATGGGCCGCTTCCAATCTGAGATCCGACGCGTTTCT
TCTCGTGTACGACATCACCAACAAGTCGAGCTTAGGCGCCTTGGACTACT
TCATGGACATGATCGAGATCGAGACCGAACAACGCGCCGAGGACAATGAT
CGCTTGCGCAAGGAATTGGGAGCGAGCGCAGAGGGCCTCGACGTGGGCAT
GCCACCTCCGGTCAAGATCATCGCAGGGAACAAGTGCGATCTGAAAGACA
GCAGAGTCATTAGTTCCCGCGAAGGCCTGGAGTATGCCCGAAAACACGGT
TGCGGCTTCATGGAGACCAGCGCTAGGGAGATGGTCAACATTGAGGAGAC
CTTTGCTCATACGACCCTACCATCGGAAAATCATCCATCACCTTGCGCCT
GGTGCGGAGCCAGTGGATACATGAATGGCCGACGCCACCGACAAGATCTC
TATCACCATCTGCGGCGATGGTGGATGCGTCCTAGTCCGTCGGGTCGTCG
AGGCCCGCCGACTACACTACCAGAAGGGTCCTGAGGCCACCCAAGCGGCT
CATATTGGCGAGTCTTCGACAGCTGCCAAAACCCCTGCCGACACGGTTGT
TAGCAAGGAAGGCAAGGGAGAATCGCAGAAGCGCACGCAGAAACGACAGA
GTGGTCTTCGTGGATTCTTTGGGAAAGACAAACGTGCACGTCAGGATTCG
GGCGAGAAGGGCCATCTCCGATCAGAGGCACCTGGGTCGGGGCAGAACAA
GCCATCCAAGCCTGCAAAGGCAAGCATATGGAAGCGCATGAGTTGTTGTT
AGAGGATTCATATTCGGTTACACGCGTGGTTGATGGCGTGCCATACTTCC
TATCCATCACCGACACGGCCGGCCAGGAGGAGTATCGCGGCTTATGGGCC
GCTTCCAATCTGAGATCCGACGCGTTTCTTCTCGTGTACGACATCACCAA
CAAGTCGAGCTTAGGCGCCTTGGACTACTTCATGGACATGATCGAGATCG
AGACCGAACAACGCGCCGAGGACAATGATCGCTTGCGCAAGGAATTGGGA
GCGAGCGCAGAGGGCCTCGACGTGGGCATGCCACCTCCGGTCAAGATCAT
CGCAGGGAACAAGTGCGATCTGAAAGACAGCAGAGTCATTAGTTCCCGCG
AAGGCCTGGAGTATGCCCGAAAACACGGTTGCGGCTTCATGGAGACCAGC
GCTAGGGAGATGGTCAACATTGAGGAGACCTTTGCTCATACGACCCTACC
ATCGGAAAATCATCCATCACCTTGCGCCTGGTGCGGAGCCAGTGGATACA
TGAATGGCCGACGCCACCGACAAGATCTCTATCACCATCTGCGGCGATGG
TGGATGCGTCCTAGTCCGTCGGGTCGTCGAGGCCCGCCGACTACACTACC
AGAAGGGTCCTGAGGCCACCCAAGCGGCTCATATTGGCGAGTCTTCGACA
GCTGCCAAAACCCCTGCCGACACGGTTGTTAGCAAGGAAGGCAAGGGAGA
ATCGCAGAAGCGCACGCAGAAACGACAGAGTGGTCTTCGTGGATTCTTTG
GGAAAGACAAACGTGCACGTCAGGATTCGGGCGAGAAGGGCCATCTCCGA
TCAGAGGCACCTGGGTCGGGGCAGAACAAGCCATCCAAGCCTGCAAAGGC
AAGCATATGGAAGCGCATGAGTTGTTGTTAGAGGATTCATATTCGGTTAC
ACGCGTGGTTGATGGCGTGCCATACTTCCTATCCATCACCGACACGGCCG
GCCAGGAGGAGTATCGCGGCTTATGGGCCGCTTCCAATCTGAGATCCGAC
GCGTTTCTTCTCGTGTACGACATCACCAACAAGTCGAGCTTAGGCGCCTT
GGACTACTTCATGGACATGATCGAGATCGAGACCGAACAACGCGCCGAGG
ACAATGATCGCTTGCGCAAGGAATTGGGAGCGAGCGCAGAGGGCCTCGAC
GTGGGCATGCCACCTCCGGTCAAGATCATCGCAGGGAACAAGTGCGATCT
GAAAGACAGCAGAGTCATTAGTTCCCGCGAAGGCCTGGAGTATGCCCGAA
AACACGGTTGCGGCTTCATGGAGACCAGCGCTAGGGAGATGGTCAACATT
GAGGAGACCTTTGCTCATACGACCCTACCATCGGAAAATCATCCATCACC
TTGCGCCTGGTGCGGAGCCAGTGGATACATGAATGGCCGACGCCACCGAC
AAGATCTCTATCACCATCTGCGGCGATGGTGGATGCGTCCTAGTCCGTCG
GGTCGTCGAGGCCCGCCGACTACACTACCAGAAGGGTCCTGAGGCCACCC
AAGCGGCTCATATTGGCGAGTCTTCGACAGCTGCCAAAACCCCTGCCGAC
ACGGTTGTTAGCAAGGAAGGCAAGGGAGAATCGCAGAAGCGCACGCAGAA
ACGACAGAGTGGTCTTCGTGGATTCTTTGGGAAAGACAAACGTGCACGTC
AGGATTCGGGCGAGAAGGGCCATCTCCGATCAGAGGCACCTGGGTCGGGG
CAGAACAAGCCATCCAAGCCTGCAAAGGCAAGCATATGGAAGCGCATGAG
TTGTTGTTAGAGGATTCATATTCGGTTACACGCGTGGTTGATGGCGTGCC
ATACTTCCTATCCATCACCGACACGGCCGGCCAGGAGGAGTATCGCGGCT
TATGGGCCGCTTCCAATCTGAGATCCGACGCGTTTCTTCTCGTGTACGAC
ATCACCAACAAGTCGAGCTTAGGCGCCTTGGACTACTTCATGGACATGAT
CGAGATCGAGACCGAACAACGCGCCGAGGACAATGATCGCTTGCGCAAGG
AATTGGGAGCGAGCGCAGAGGGCCTCGACGTGGGCATGCCACCTCCGGTC
AAGATCATCGCAGGGAACAAGTGCGATCTGAAAGACAGCAGAGTCATTAG
TTCCCGCGAAGGCCTGGAGTATGCCCGAAAACACGGTTGCGGCTTCATGG
AGACCAGCGCTAGGGAGATGGTCAACATTGAGGAGACCTTTGCTCATACG
ACCCTACCATCGGAAAATCATCCATCACCTTGCGCCTGGTGCGGAGCCAG
TGGATACATGAATGGCCGACGCCACCGACAAGATCTCTATCACCATCTGC
GGCGATGGTGGATGCGTCCTAGTCCGTCGGGTCGTCGAGGCCCGCCGACT
ACACTACCAGAAGGGTCCTGAGGCCACCCAAGCGGCTCATATTGGCGAGT
CTTCGACAGCTGCCAAAACCCCTGCCGACACGGTTGTTAGCAAGGAAGGC
AAGGGAGAATCGCAGAAGCGCACGCAGAAACGACAGAGTGGTCTTCGTGG
ATTCTTTGGGAAAGACAAACGTGCACGTCAGGATTCGGGCGAGAAGGGCC
ATCTCCGATCAGAGGCACCTGGGTCGGGGCAGAACAAGCCATCCAAGCCT
GCAAAGGCAAGCATATGGAAGCGCATGAGTTGTTGTTAGAGGATTCATAT
TCGGTTACACGCGTGGTTGATGGCGTGCCATACTTCCTATCCATCACCGA
CACGGCCGGCCAGGAGGAGTATCGCGGCTTATGGGCCGCTTCCAATCTGA
GATCCGACGCGTTTCTTCTCGTGTACGACATCACCAACAAGTCGAGCTTA
GGCGCCTTGGACTACTTCATGGACATGATCGAGATCGAGACCGAACAACG
CGCCGAGGACAATGATCGCTTGCGCAAGGAATTGGGAGCGAGCGCAGAGG
GCCTCGACGTGGGCATGCCACCTCCGGTCAAGATCATCGCAGGGAACAAG
TGCGATCTGAAAGACAGCAGAGTCATTAGTTCCCGCGAAGGCCTGGAGTA
TGCCCGAAAACACGGTTGCGGCTTCATGGAGACCAGCGCTAGGGAGATGG
TCAACATTGAGGAGACCTTTGCTCATACGACCCTACCATCGGAAAATCAT
CCATCACCTTGCGCCTGGTGCGGAGCCAGTGGATACATGAATGGCCGACG
CCACCGACAAGATCTCTATCACCATCTGCGGCGATGGTGGATGCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001973-T1.utr5p1 | KJC3_001973-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR005225 |
| DBxref | InterPro:IPR001806 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1321477..1323483 - |
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