|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1337028..1340003- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001979-T1 ID=KJC3_001979-T1|Name=KJC3_001979-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2976bp|location=Sequence derived from alignment at ch2:1337028..1340003- (Aspergillus niger KJC3)
CCTCAGTCCTGAGGTGCACCCTCTTGCTCTGGTCCTCGTGCTTTTCTCTC
TATTCTTCTACCTTTGTCTATTCGGTTCTCGGGAACGTGTTGCTTGCGAG
CTTCTTCCTATCTAGACCTACTAGCTACCTTACTTCTCTACCCATCCTCT
GTCTTGCAACCCGCCGCTCTCGCCGCTACTGGTCGGTGCACTTTGACGCC
CTTTCCCACCACCCCGATCCACCCCAGCTTACCTCGATTCCGACCTTTAC
CGTGACCTTCTGCTTCTTAATTTCATTCCTTTTTCCATGGCTCCACGACG
ACACAATATCGGTGCTAGTCGCCGCCGAAGAAGAGACGAAGAGGGCGAAG
ATGAGGGCTCACTAGATGGAGAATTGGAGGACGACTCCCTAAGCGAAGGG
TCCATTATCAGCCATCCCGACGAGGAGGATGCCGATGGCGAGGGCAGTGA
TGAGAGTGATGACGAGGCGTCTGTGACCCGGGATGCGGGCAATACTCACC
TTCCCCAGCTCAACGGTCGTACGCCCGCAGGAAGCCAGAAGCTCGGGCGC
CGCCATTCTACCTCGCCCGGGAAACGCCACACGGGAACGGTCATGTCAGA
TACAGAAGCGATGATGAACGGGATGAGTCTGTCGGACAAGACGACTGGGG
TGGCCGAAATCCACTTTGATGATCTGAAGGGGGAGCTTGGCCAACAGACT
GGGAGAACTCCGTCGGCGCCTCCGGCAGAGCCAAAACAAGACAGCCTGAC
GGAGAGGAGGCGTCGTGACAATGAGAAGTATACAAAGGAAAAGGAAGAGA
ACCCAGCGTTCGTCCCCACCCGAGGAAGCTTCTTCCTTCACGACAAACGT
TCGACCGATAATGCGGCCAACGGTCACAAACCATTTGCCAAGTCCAAGTC
GAGACCATACGGTCTCATCGTGGACGGCAATGTGCGCAAGTACGCTTGAA
CCAACCCTCTAGCTCTTTCACTGGTGAAGCAATCCGAACATCCACGCTAA
CAGCTTGCAGGAACCAGGTCAAATCAGATGCCAGTGAAAACAAGTGGACG
CACGATCTGCATGATACTGTTGCTGGAGATGATGCACCCGTCTCGAAAGT
GCCTGCGGTGCCTGCGACTGTCCCAACCTATCCCCCGAAGCCAGTCCCTA
CAGCTCCTCGATCGTCCCCGCCCAATAGGTCGTTCTCGAGTACTACAATG
ATAGGGAACGTACCTGTCGTGGTCTATTTACCGGGCATGGCTCAGCCTAT
CTCATACCCTAATGTTCCAAAGAAGCAACACACCCGTTTACCACAACACC
GTCCTCCTCTGCGCCGCGATAAGCCCGTCCGAATCTCGCTTCCCGGGCAG
CCTGCGCGATATATCTTCCCCGCGACAGAGCGATCTTTCATCTTCATCCC
GCGGGCGCTCCGGCCTAATCAACAGGCCTTCCGTGGGCGTCGGAGCGGAT
TCTTCCCAGGACGTCGGCCTAGTATCTATGCAGGTTCCACATACACTCCA
AGCGTTAGCATCAGTAGGAGGTCGTCTTTCGGCAAGGCGCCCTCCCAAGA
AGGATACCACTCGCCGGCCGCCTCGGTCCTCTCCAGGCAGACGATCGTGG
CCACAGACAACGGTAAGCCCGTTGTCCGTTTACCTCCACCTCCAAGACCA
ACAGCCGGACTACCACCCCCACCACCCGGCCCTCCATCAGCAGTTCCTCC
TCTTCAACCACAGCCTCAACCTCCAGTGTTCCGGGAGAGCCGTCCGGCGC
CCATCCCGATGCACCAACCTCGTCCCCAAAAGGCCGTCTCTGTTGCCGAC
ATTGAGACCCCAGCAAGCTTTCCATTCAATCCTCCTCAGCCGCAGCAGGA
GCAGCCATTCCATCATCAGGTCCCAATGCCTGGAACTGGGCCCGTCTATG
GCTCAGATGCGCCCGGCTATGCTGCTTCGGCTCACTCGTCGGTGACACCC
TTATCCCACATACCCGAGCGTGCAATCCATGCCCAACCCTTCCAGCCATA
CGGCTATCAACAGCCACAAGCATTCTATCCCAATTCTTACCCACCTGGCG
CCATGTACTATTCTGTCACCGGGACCGAGTTCCCCCCGTACAATGCAGCA
GTGGGGCCCGGCACCTCTGTGCCTCCCTTCCCCCCGGGGCAGCAGGTGCC
GTATATGGTGCCCGGTGCGCACACGTCGGGTGAGCAACCGGCTCAACCGG
GCACAGTGGCACACGAAGCAGGTGGTACGGTGTATTTCTACGATGCTAAC
CAGATGTATCAAAACTCCTCCTATGGGATGCCGAATGCGCCCGGGGCCGG
CGGTGTCATGGGCATGGGCGGCATGATGACGCCCCCTGGTACAACGTACT
ACTATCCTCAGTCTCAAGGCAGTGTCTACTACGGCTCTCAGTGAACCGAG
GCCTGTGGGTATAGCCTGGCCTAAGCTATGACTTTCTCTCTGCCTTTTTC
TTCGGTTTCAAAAATTCAATTTCTTTCAGTGTTCATTCTTATTTTTTATT
TTTTATTTTTTGATGCTATGTTTACTTCCCCCCTTCCGCCTTGGTCTAAC
GCCTTATCTTTCCCTATTAGTCCGCCTTTGTTTCAGTTTCATACTCATTA
TTGTTTTTCTTCAATTTTGCGCCTTCGCTTCGTGTTCACTTTGTTCGCCG
TTTTCTTCTTTTTCTTTTTTCTTGTTTGCCTCATGGAAAAGCGGCAAATT
TGTTGTTGATCCCAATATGACGACCTCCCATTGCCTCATAGCCTGTGCCT
TTCCTTTCTTGTTGAGGTCTAGTGTCGCCGGGGCATCGTGCTCTCCTAGT
TCCGTCTCTGATTGTGGTTAGATAAGGATTCTATGCATTACTAGCGATCG
TCTTGCTGTGCTGTTCTATTTTTACCCCTGTTTCTTCTCATCACTTTTTT
TTTTCTTTCTGCCTACGTATTCCGTTTCATGTTTTCTTTTTCTTGTTTCT
TTCGTTGCCGCTTTTTCTTGCTTTCT back to topCoding sequence (CDS) from alignment at ch2:1337028..1340003- >KJC3_001979-T1 ID=KJC3_001979-T1|Name=KJC3_001979-T1|organism=Aspergillus niger KJC3|type=CDS|length=4074bp|location=Sequence derived from alignment at ch2:1337028..1340003- (Aspergillus niger KJC3)
GAACCAGGTCAAATCAGATGCCAGTGAAAACAAGTGGACGCACGATCTGC
ATGATACTGTTGCTGGAGATGATGCACCCGTCTCGAAAGTGCCTGCGGTG
CCTGCGACTGTCCCAACCTATCCCCCGAAGCCAGTCCCTACAGCTCCTCG
ATCGTCCCCGCCCAATAGGTCGTTCTCGAGTACTACAATGATAGGGAACG
TACCTGTCGTGGTCTATTTACCGGGCATGGCTCAGCCTATCTCATACCCT
AATGTTCCAAAGAAGCAACACACCCGTTTACCACAACACCGTCCTCCTCT
GCGCCGCGATAAGCCCGTCCGAATCTCGCTTCCCGGGCAGCCTGCGCGAT
ATATCTTCCCCGCGACAGAGCGATCTTTCATCTTCATCCCGCGGGCGCTC
CGGCCTAATCAACAGGCCTTCCGTGGGCGTCGGAGCGGATTCTTCCCAGG
ACGTCGGCCTAGTATCTATGCAGGTTCCACATACACTCCAAGCGTTAGCA
TCAGTAGGAGGTCGTCTTTCGGCAAGGCGCCCTCCCAAGAAGGATACCAC
TCGCCGGCCGCCTCGGTCCTCTCCAGGCAGACGATCGTGGCCACAGACAA
CGGTAAGCCCGTTGTCCGTTTACCTCCACCTCCAAGACCAACAGCCGGAC
TACCACCCCCACCACCCGGCCCTCCATCAGCAGTTCCTCCTCTTCAACCA
CAGCCTCAACCTCCAGTGTTCCGGGAGAGCCGTCCGGCGCCCATCCCGAT
GCACCAACCTCGTCCCCAAAAGGCCGTCTCTGTTGCCGACATTGAGACCC
CAGCAAGCTTTCCATTCAATCCTCCTCAGCCGCAGCAGGAGCAGCCATTC
CATCATCAGGTCCCAATGCCTGGAACTGGGCCCGTCTATGGCTCAGATGC
GCCCGGCTATGCTGCTTCGGCTCACTCGTCGGTGACACCCTTATCCCACA
TACCCGAGCGTGCAATCCATGCCCAACCCTTCCAGCCATACGGCTATCAA
CAGCCACAAGCATTCTATCCCAATTCTTACCCACCTGGCGCCATGTACTA
TTCTGTCACCGGGACCGAGTTCCCCCCGTACAATGCAGCAGTGGGGCCCG
GCACCTCTGTGCCTCCCTTCCCCCCGGGGCAGCAGGTGCCGTATATGGTG
CCCGGTGCGCACACGTCGGGTGAGCAACCGGCTCAACCGGGCACAGTGGC
ACACGAAGCAGGTGGTACGGTGTATTTCTACGATGCTAACCAGATGTATC
AAAACTCCTCCTATGGGATGCCGAATGCGCCCGGGGCCGGCGGTGTCATG
GGCATGGGCGGCATGATGACGCCCCCTGGTACAACGTACTACTATCCTCA
GTCTCAAGGCAGTGTCTACTACGGCTCTCAGTGAATGGCTCCACGACGAC
ACAATATCGGTGCTAGTCGCCGCCGAAGAAGAGACGAAGAGGGCGAAGAT
GAGGGCTCACTAGATGGAGAATTGGAGGACGACTCCCTAAGCGAAGGGTC
CATTATCAGCCATCCCGACGAGGAGGATGCCGATGGCGAGGGCAGTGATG
AGAGTGATGACGAGGCGTCTGTGACCCGGGATGCGGGCAATACTCACCTT
CCCCAGCTCAACGGTCGTACGCCCGCAGGAAGCCAGAAGCTCGGGCGCCG
CCATTCTACCTCGCCCGGGAAACGCCACACGGGAACGGTCATGTCAGATA
CAGAAGCGATGATGAACGGGATGAGTCTGTCGGACAAGACGACTGGGGTG
GCCGAAATCCACTTTGATGATCTGAAGGGGGAGCTTGGCCAACAGACTGG
GAGAACTCCGTCGGCGCCTCCGGCAGAGCCAAAACAAGACAGCCTGACGG
AGAGGAGGCGTCGTGACAATGAGAAGTATACAAAGGAAAAGGAAGAGAAC
CCAGCGTTCGTCCCCACCCGAGGAAGCTTCTTCCTTCACGACAAACGTTC
GACCGATAATGCGGCCAACGGTCACAAACCATTTGCCAAGTCCAAGTCGA
GACCATACGGTCTCATCGTGGACGGCAATGTGCGCAAGAACCAGGTCAAA
TCAGATGCCAGTGAAAACAAGTGGACGCACGATCTGCATGATACTGTTGC
TGGAGATGATGCACCCGTCTCGAAAGTGCCTGCGGTGCCTGCGACTGTCC
CAACCTATCCCCCGAAGCCAGTCCCTACAGCTCCTCGATCGTCCCCGCCC
AATAGGTCGTTCTCGAGTACTACAATGATAGGGAACGTACCTGTCGTGGT
CTATTTACCGGGCATGGCTCAGCCTATCTCATACCCTAATGTTCCAAAGA
AGCAACACACCCGTTTACCACAACACCGTCCTCCTCTGCGCCGCGATAAG
CCCGTCCGAATCTCGCTTCCCGGGCAGCCTGCGCGATATATCTTCCCCGC
GACAGAGCGATCTTTCATCTTCATCCCGCGGGCGCTCCGGCCTAATCAAC
AGGCCTTCCGTGGGCGTCGGAGCGGATTCTTCCCAGGACGTCGGCCTAGT
ATCTATGCAGGTTCCACATACACTCCAAGCGTTAGCATCAGTAGGAGGTC
GTCTTTCGGCAAGGCGCCCTCCCAAGAAGGATACCACTCGCCGGCCGCCT
CGGTCCTCTCCAGGCAGACGATCGTGGCCACAGACAACGGTAAGCCCGTT
GTCCGTTTACCTCCACCTCCAAGACCAACAGCCGGACTACCACCCCCACC
ACCCGGCCCTCCATCAGCAGTTCCTCCTCTTCAACCACAGCCTCAACCTC
CAGTGTTCCGGGAGAGCCGTCCGGCGCCCATCCCGATGCACCAACCTCGT
CCCCAAAAGGCCGTCTCTGTTGCCGACATTGAGACCCCAGCAAGCTTTCC
ATTCAATCCTCCTCAGCCGCAGCAGGAGCAGCCATTCCATCATCAGGTCC
CAATGCCTGGAACTGGGCCCGTCTATGGCTCAGATGCGCCCGGCTATGCT
GCTTCGGCTCACTCGTCGGTGACACCCTTATCCCACATACCCGAGCGTGC
AATCCATGCCCAACCCTTCCAGCCATACGGCTATCAACAGCCACAAGCAT
TCTATCCCAATTCTTACCCACCTGGCGCCATGTACTATTCTGTCACCGGG
ACCGAGTTCCCCCCGTACAATGCAGCAGTGGGGCCCGGCACCTCTGTGCC
TCCCTTCCCCCCGGGGCAGCAGGTGCCGTATATGGTGCCCGGTGCGCACA
CGTCGGGTGAGCAACCGGCTCAACCGGGCACAGTGGCACACGAAGCAGGT
GGTACGGTGTATTTCTACGATGCTAACCAGATGTATCAAAACTCCTCCTA
TGGGATGCCGAATGCGCCCGGGGCCGGCGGTGTCATGGGCATGGGCGGCA
TGATGACGCCCCCTGGTACAACGTACTACTATCCTCAGTCTCAAGGCAGT
GTCTACTACGGCTCTCAGTGAATGGCTCCACGACGACACAATATCGGTGC
TAGTCGCCGCCGAAGAAGAGACGAAGAGGGCGAAGATGAGGGCTCACTAG
ATGGAGAATTGGAGGACGACTCCCTAAGCGAAGGGTCCATTATCAGCCAT
CCCGACGAGGAGGATGCCGATGGCGAGGGCAGTGATGAGAGTGATGACGA
GGCGTCTGTGACCCGGGATGCGGGCAATACTCACCTTCCCCAGCTCAACG
GTCGTACGCCCGCAGGAAGCCAGAAGCTCGGGCGCCGCCATTCTACCTCG
CCCGGGAAACGCCACACGGGAACGGTCATGTCAGATACAGAAGCGATGAT
GAACGGGATGAGTCTGTCGGACAAGACGACTGGGGTGGCCGAAATCCACT
TTGATGATCTGAAGGGGGAGCTTGGCCAACAGACTGGGAGAACTCCGTCG
GCGCCTCCGGCAGAGCCAAAACAAGACAGCCTGACGGAGAGGAGGCGTCG
TGACAATGAGAAGTATACAAAGGAAAAGGAAGAGAACCCAGCGTTCGTCC
CCACCCGAGGAAGCTTCTTCCTTCACGACAAACGTTCGACCGATAATGCG
GCCAACGGTCACAAACCATTTGCCAAGTCCAAGTCGAGACCATACGGTCT
CATCGTGGACGGCAATGTGCGCAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001979-T1.utr3p1 | KJC3_001979-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001979-T1.utr5p1 | KJC3_001979-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018545 |
| DBxref | PFAM:PF09405 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1337028..1340003 - |
|
