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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1340924..1342039- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001980-T1 ID=KJC3_001980-T1|Name=KJC3_001980-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1116bp|location=Sequence derived from alignment at ch2:1340924..1342039- (Aspergillus niger KJC3)
ATGGCTGGCGTAGGTGAGGAAAACCACAAGAAGCGCAAGCTTCCAGATGT
CCCCGAGATCGAGATTGACGTTTCTGCCCCCGAGCCTCCCTCAAAGAAGG
CGTTGCGAAAGCTCAAGAAGAAGGCTGCAGAAGGCCCCTCGGATACCACT
ACAGAGAAGAAAACAGAGGAGACCCCTGTAGACAATGACAAAGCTGCCAC
TCAGAAGCGCTCCGATTTTGGTATCTGGATCGGAAACCTGCCATTCTTCG
CGACGAAAGATGACGTGCGCAAGTTCTTTACGACCAACTGCTCCTTTACG
GATACGACCATCACGAGAATTCACATGCCCAAGTTTGGTGATAAGCATGG
AAAAGCCCAGAACAAAGGATTCGCTTACGTCGATTTCTCCACGCAGAAGG
CCTGCCAGGAGGCAATGGGCCTCAGTGAACAGCTTCTCACCGGACGTCGT
GTGCTCATCAAAGATGCAAAGAACTTCTCTGGTAGGCCAGAGAAGCCTCA
AGGAGAGGGTCAGAACGCCAATTCGGGGGCAGCATCTGGAAATCCCCCGT
CAAAGCGGATATTTGTCGGCAACCTCGGCTTCGACGCTACGAAGGAGCTC
ATCGAAGAGCACTTCTCCCAATGTGGGACTATCGCAAACGTACATGTGGC
AACATTCCAAGACTCCGGCAAATGCAAGGGTTATGCTTGGGTAGTGTTTG
AGGATCTTGCAGCAGCCGAAGCAGCGGTGAAGGGCTACGTGCTGGTTAAG
GAGGATGATGAAGAGGATGAAGAGTCCGACACCGAAAGCCGCAAAAAGTC
CAAGAAGCCGCGACAGAAGAGAGTGTGGGTGAACAACCTGCTCGGTAGGC
GGATGCGCATGGAATTTGCCGAAGATGCCACGACGCGCTATAAGAAGCGA
TTCGGTAAGGACGGCGAAGGCAAGAAGAACAATACCTCAGACATCAGCGA
GGTTGAGCCTGCAGAGAACAACTCGGCGGGTGAGCAGTCTCGCCAGTCGC
GACCGGGCAAGGCTAGGCAAGGAAAGCCGGATTATACCAGATACGATCAA
GATACTGTTCAGAAGCTCAGTGGAGCCATTGTTGAAGCTCAAGGAAAGAA
GATCACCTTTGATTAA back to topCoding sequence (CDS) from alignment at ch2:1340924..1342039- >KJC3_001980-T1 ID=KJC3_001980-T1|Name=KJC3_001980-T1|organism=Aspergillus niger KJC3|type=CDS|length=1116bp|location=Sequence derived from alignment at ch2:1340924..1342039- (Aspergillus niger KJC3)
ATGGCTGGCGTAGGTGAGGAAAACCACAAGAAGCGCAAGCTTCCAGATGT
CCCCGAGATCGAGATTGACGTTTCTGCCCCCGAGCCTCCCTCAAAGAAGG
CGTTGCGAAAGCTCAAGAAGAAGGCTGCAGAAGGCCCCTCGGATACCACT
ACAGAGAAGAAAACAGAGGAGACCCCTGTAGACAATGACAAAGCTGCCAC
TCAGAAGCGCTCCGATTTTGGTATCTGGATCGGAAACCTGCCATTCTTCG
CGACGAAAGATGACGTGCGCAAGTTCTTTACGACCAACTGCTCCTTTACG
GATACGACCATCACGAGAATTCACATGCCCAAGTTTGGTGATAAGCATGG
AAAAGCCCAGAACAAAGGATTCGCTTACGTCGATTTCTCCACGCAGAAGG
CCTGCCAGGAGGCAATGGGCCTCAGTGAACAGCTTCTCACCGGACGTCGT
GTGCTCATCAAAGATGCAAAGAACTTCTCTGGTAGGCCAGAGAAGCCTCA
AGGAGAGGGTCAGAACGCCAATTCGGGGGCAGCATCTGGAAATCCCCCGT
CAAAGCGGATATTTGTCGGCAACCTCGGCTTCGACGCTACGAAGGAGCTC
ATCGAAGAGCACTTCTCCCAATGTGGGACTATCGCAAACGTACATGTGGC
AACATTCCAAGACTCCGGCAAATGCAAGGGTTATGCTTGGGTAGTGTTTG
AGGATCTTGCAGCAGCCGAAGCAGCGGTGAAGGGCTACGTGCTGGTTAAG
GAGGATGATGAAGAGGATGAAGAGTCCGACACCGAAAGCCGCAAAAAGTC
CAAGAAGCCGCGACAGAAGAGAGTGTGGGTGAACAACCTGCTCGGTAGGC
GGATGCGCATGGAATTTGCCGAAGATGCCACGACGCGCTATAAGAAGCGA
TTCGGTAAGGACGGCGAAGGCAAGAAGAACAATACCTCAGACATCAGCGA
GGTTGAGCCTGCAGAGAACAACTCGGCGGGTGAGCAGTCTCGCCAGTCGC
GACCGGGCAAGGCTAGGCAAGGAAAGCCGGATTATACCAGATACGATCAA
GATACTGTTCAGAAGCTCAGTGGAGCCATTGTTGAAGCTCAAGGAAAGAA
GATCACCTTTGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092645U1 |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1340924..1342039 - |
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