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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1345715..1348133+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001983-T1 ID=KJC3_001983-T1|Name=KJC3_001983-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2419bp|location=Sequence derived from alignment at ch2:1345715..1348133+ (Aspergillus niger KJC3)
TAACCAACCAAGCAGAAGAGTAACACAAAACAACTCGGGGATCCGAGCGA
GGGTGGCGTTGATCAGGAGGAGGGGGCGTGACCAGTTGGCTGCCGCACAA
ATACATTCTGATGTTATTCTTGTTTCTTTCACTCTTTCTTTCTTCTTACC
TTCAACCCAATACTCTTCATCGACCCATTGGGGATTTCCATCAACACCCT
TGTTCTGTTCCAGCCTTACCATGTCCTTCGTCTCAGAATCACTCTTTCTA
CTGTCTACCATCACGTTTACCATACCCTCAGTATAGCCGCCCGGGTTGTG
CCGGTTGCACTTGGTGTTGCCTTGCTTCTACAAGTTATACTTGTTTCTAC
ATTCCGGTTTCCCTCTGGCTTATTCATAGTAAATTCTCGGATACATTATC
CCGCATTCTCCCCCGTGAAAATTCTTCCTGCACTTAGCAATCTCCTCTTT
GCAATCACCTCTCAGCTGGTCGACATTGGGCGTATCCATCATGCCAGACC
TGCGCCGTCAAGTATTGGAGAGTGGCAAAACCATCTCTCGCAAAGCTGCT
TCCCGCGAAGGCTCTCGACGTACTTCGCGCGCCAACTCTACCCAGAATTC
CCGCCATTCCTCTCAGAATCAAAGTCGACATGCCTCAGACGAGGAAGACC
TTGACAGTCTAAGCGATGACACGGCCATGAGGTGAGCATTCCATGATCAC
TGCTTTCTCCCCCTCCAATTTATTTTTCTCTTTGGTTTCCCCCCAAACAC
GGAATGATGTCATCGTCGTCCGTTCCCTCTGTGTGCTCCGTTACTAATGC
GTGTTTTACGACCCAGCATTGGCTCGTTGGACGATCTAACCGATAACCCC
GATCTGGACAACCATGACTGGGTTGAGGAGCTTGGGGACGTCATCGAAGA
TATTCTGGACCGCAAACGCAGCAGCAATTTGAGTCGCGAAGAGGCTTACG
CTGCGTTTTGCCGACTAGCCAAATATCACTATGTCGAGGAACAAATTCGC
GGTCGCGTTCTGGACTTGGTAGCGGCATTCAACCGCAGTATCAAGTTCGA
GACCAGTGTGCGCGAAACCACTCTGGCGCTCCGTGCTGTCGAGCTCCTCG
CCATTTCAGCCTACGATAATACCATCTACGAACATGTCGAGCCCTTGTTG
ACTCGCACCGTGCGAGATTCAACCTCTAACACGGTCAAGGCAGCAGCGAT
CCACTGTCTGGGCGTCTGCACCATCCATGCAGGCGCTAGCGAAGATGGGA
TTCTCGACCAGATGACGTTTTTCTTGGACATTGCTGCCTCGGACGGGCAG
TCGATCGGTGCTGGGGACGACGCAGCCAGCGTCGTTGCTGCTCTGCAAGA
ATGGGGCGTGCTTGCGACCTATATCGACGATCTTGAAGGCGAAAGCGAGG
ATGCCGTGCAGATCTTCATGGACCAGCTGAACAGTGGCGATTCTGCGGTC
CAGATTGCTGCCGGCGAGAACATTGCGCTCTTGTACGAGAAGAGCTATAC
TCCACAGGAGGACGATGAGGACGACGAGGACGAGGAGGAAGAATCGGAAG
AGGAAACCTTCTTGTCCGGAGGTCGCGGCAACGGCCCCAAGTTGATCAAG
CGCTACAACGCCTACCACAACACGCACGAGCTCGAGCAGCAACTCCATTC
GCTGGCCAAAGTCCACAGCAAACGGATCAGCAAACGCGATAAGAAGAGTC
TACACAGCAACTTCGCCTCCATCCTTACGACGGTGGAGAATCCCCGTCGG
GGACCCATGTACAACACCGCTATCGACCAGGACACCAACCGCCACTACGG
CAGCAAGCTGACGGTCAAGATTGGCCGACAGGGCGTGATGAACATCGATC
GCTGGTGGAAATGGACGCGGCTGAGCTCGCTTCGACGCACCCTGCAGGGC
GGCTTCGCAGCGCACTACTATCAAGGCAACCGCGCCGTGCTGGAAAGCCT
TCCGGTGATCATGCGCATGGACACGCCGTCGGACCGAGGGTATGCCAAGC
GCACGGCCAAACATCGGGATAGTCGTCGGTGGGCGGTCCACGAGGCCTCG
GACGAAGACTAGACATGTGATGAGTTCATCGTTCGTTTTACTGGTTTTTG
AGTTTGATTCCCTGTTGCGTTAGATTTATGGCAGCGGTTGTTTTGATGTT
TTCCTATCTTTGTGCAGTTGTCTTCGATTCCCGTTTCTAGAACACACACT
CGCCGCTGCTAGCAGTGTGATTAGAAACGAACAAAAGCATACATACATCC
ATACATACTTGACAATAACTATGTAAGGGAAATTTTTCAGTTATTTCTAT
ATGCTCTTTCAATATAAGTAGTGTATATATAAGTCTTGACTATGTTACAC
ATTACATACACTACTATCTCTGTATGATCTCAATCCATACCGTCATCAAT
AGTAACACCCGATTTCAAT back to topCoding sequence (CDS) from alignment at ch2:1345715..1348133+ >KJC3_001983-T1 ID=KJC3_001983-T1|Name=KJC3_001983-T1|organism=Aspergillus niger KJC3|type=CDS|length=1266bp|location=Sequence derived from alignment at ch2:1345715..1348133+ (Aspergillus niger KJC3)
ATGCGTGTTTTACGACCCAGCATTGGCTCGTTGGACGATCTAACCGATAA
CCCCGATCTGGACAACCATGACTGGGTTGAGGAGCTTGGGGACGTCATCG
AAGATATTCTGGACCGCAAACGCAGCAGCAATTTGAGTCGCGAAGAGGCT
TACGCTGCGTTTTGCCGACTAGCCAAATATCACTATGTCGAGGAACAAAT
TCGCGGTCGCGTTCTGGACTTGGTAGCGGCATTCAACCGCAGTATCAAGT
TCGAGACCAGTGTGCGCGAAACCACTCTGGCGCTCCGTGCTGTCGAGCTC
CTCGCCATTTCAGCCTACGATAATACCATCTACGAACATGTCGAGCCCTT
GTTGACTCGCACCGTGCGAGATTCAACCTCTAACACGGTCAAGGCAGCAG
CGATCCACTGTCTGGGCGTCTGCACCATCCATGCAGGCGCTAGCGAAGAT
GGGATTCTCGACCAGATGACGTTTTTCTTGGACATTGCTGCCTCGGACGG
GCAGTCGATCGGTGCTGGGGACGACGCAGCCAGCGTCGTTGCTGCTCTGC
AAGAATGGGGCGTGCTTGCGACCTATATCGACGATCTTGAAGGCGAAAGC
GAGGATGCCGTGCAGATCTTCATGGACCAGCTGAACAGTGGCGATTCTGC
GGTCCAGATTGCTGCCGGCGAGAACATTGCGCTCTTGTACGAGAAGAGCT
ATACTCCACAGGAGGACGATGAGGACGACGAGGACGAGGAGGAAGAATCG
GAAGAGGAAACCTTCTTGTCCGGAGGTCGCGGCAACGGCCCCAAGTTGAT
CAAGCGCTACAACGCCTACCACAACACGCACGAGCTCGAGCAGCAACTCC
ATTCGCTGGCCAAAGTCCACAGCAAACGGATCAGCAAACGCGATAAGAAG
AGTCTACACAGCAACTTCGCCTCCATCCTTACGACGGTGGAGAATCCCCG
TCGGGGACCCATGTACAACACCGCTATCGACCAGGACACCAACCGCCACT
ACGGCAGCAAGCTGACGGTCAAGATTGGCCGACAGGGCGTGATGAACATC
GATCGCTGGTGGAAATGGACGCGGCTGAGCTCGCTTCGACGCACCCTGCA
GGGCGGCTTCGCAGCGCACTACTATCAAGGCAACCGCGCCGTGCTGGAAA
GCCTTCCGGTGATCATGCGCATGGACACGCCGTCGGACCGAGGGTATGCC
AAGCGCACGGCCAAACATCGGGATAGTCGTCGGTGGGCGGTCCACGAGGC
CTCGGACGAAGACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001983-T1.utr5p1 | KJC3_001983-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001983-T1.utr3p1 | KJC3_001983-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR007701 |
| DBxref | PFAM:PF05004 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1345715..1348133 + |
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