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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1373408..1376288+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001991-T1 ID=KJC3_001991-T1|Name=KJC3_001991-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2881bp|location=Sequence derived from alignment at ch2:1373408..1376288+ (Aspergillus niger KJC3)
CCCCAAACTTCCTTCACTTTCACCTTCTTCCTCACCACCCACTCACTAAC
TGCCTGTTTCCACCCGCCCTTCTATTCTACATGATCACTCTTGTTCTCTT
CAGCTAGTGGTCTTAATTGTAACTCTTTCGATACGCTTGGTAACGCGATC
TGCCCTGTTGGCGGCGTCGGTCTCCCTTTGAGCTCTGTTCTTGACCGTAC
AAGCAAACCGCCACCACAACAATGCCGTCCTTTCCATCTCGACCTCTAGT
CCGGCCGAGGGACGATGGACTCCAGTTAAGGTAGATTCGTGTTCTATTCT
AGACCATAACAGCAACATCGTGCTTACGGGACACTCCATCTAGCTATCAA
CTGCCTCATCGTGTACACGCAGCTACAGGCTACCCCCTCCTGGCCCCCAA
TGGCTCGTCGATCGTTGTTTACGGTTATGAGACTGGACTGAAGGTAGTCT
GGAGGGGAGGAAGACACTTTTCCACCGAGAAGCCTTCTGCCCCGAAAGTG
GACAAACCGCAGAAAGCCAGCAACGCCAATGATGATGCGGTCATGATTAT
TGATTCCGATGAGGAGAGCATGGCGGAGACCCAGCAGACTCAGCAAGATG
AAGAGCCAACCTACCAGTTCGAAGAGGACGAAACCGAGGTGGACCCCTTC
CACCCTTACGACGATGTCTTGCGCCAGCTTGATATACCCCTTGGAAGCAG
AGTCCTCCAGCTGGCTGTGCCTCGTGTCCTCCCCGAAACAGCGCGCTCTT
CGCTCGATCCATTTCCCCCGGCTTTGAAGAAGGACATCATCATCGCCGCT
GTGTGCGCAGACTATTCTACTCGCATTGTAACTCTGCCTTTGCTGCCCCC
TCACCCTACGCAAAGCGACTTCAGCATTCAGACGATCTCAATTAGTGGTG
GAGTATCACACCAGGAGATCCCGCGGGGAGTTAGCATCGCCTTCACCTAT
CAAGAAATTGATCAGCAAGATCAGGATACATCTTCAAACCATGGTTCATC
CCGCTCGTCTACAGGAAGGTGGGACCTCCTCGTCGCAACACATTCGGCTG
AGTCGTCTGGTCTCTTGATCATTCATCGGATTCCGGTCGCAGAGGAGGAG
AAGGCGCGCGGCACTGCATATCGTTTATGCGATGATGAGATTGAGACTAA
GCGACGGCACTTGCCCGCCCCTGCTGTGAATATCTCTTTCAATCCCTCGG
GTTACCCTGCCCTTCGACACTCCACGTTGCTAGTTGCGTTCCACAGCGGC
TGTGTCAAGGTATACTCTTGCTTCTCCACGAAACCACTCAAAGCCTCGCG
GAGGTCGTCCGGTGCCCAGAGCGAATTTGAGACCGTCGACACGGAAGGGA
AATGGTTGATCAGTCTGTACCCCGGTTTTGAGCAATCTGCTTCGGGACTC
CCTCGACGGAAGATCATCACTCACGCAGAATGGGTGCTTGGAGGGCGTGC
CATCTTGGTCCTCACGTCGGATGGCGAATGGGGTGTCTGGGATTTGGAAG
GGGCTGGCCCCGGGACCATCAAAGGTCCGCTTCAGCGACAGTCCAGTGTG
CAGGGAGTAACAGGTGGTTCACTGACAACGTTTTCCGTCAGCGGTCGGAT
TCTGAGTCCCCTGCCTGGCGCCAGTCGTTCTGAGACAAGCGGACCTTCCT
TCGAACAACGGCCCAAATTTGCGCCCTTGACGCCGTCTACGAAGCGTCTG
CGCGAAGACACGCTGCTCAAAGGCGCCTCCGTTGGAACAGCCAGCCCATC
CCTGAGTGGAGGGATCTCAGTGTATCAGACTAACTCCTGGAGGGACGCGC
TGCCCGATGAATCGATTTTGCTGCAGCATGGAAACCAAAGCGCAGTCATT
CCCAGTCTGCTCTCCTTGTGGCGCAACGCTGTCAAGGCTAGTGGCACCTT
CGATTCATCCAACCGCTGCCGGGTGTCTCCCCTCCAAGATATCACCCTAG
TGGGTGAGCGCCTGAAAGGCATCGGACACCTCCCTGCGGCGACCCGCTCT
ACTCGCACACAGCCATTTGATATGCTTCTCACGGCCGAACATCGACTTGT
GATCCTCGCCCCACGGTTGACTGAGCCAGCACCAGCACCCGTTACCGAAT
ACATCCCCGAGCCCGCCACTCAGGAAACAGACCAGCAGATGCTCCAAAGG
GGGCAGCTCGGCGTGGAAGGAATGGACCGACTCCTTAGTGGCATGGCGAG
CACGAATCGCTCACTCCGTATGGGAAGTCCCATCAAGCGAGCGCGGGTCT
TCACTTAAGCAGACACAATGTCGACAGCAGAACAGCCACCTTCCCTTTTC
CACATATGCTCCCCACATGTTCCTAACAGATGAAGCTGAGATCAAAGAAC
AGAGATACCCATCCATCACACTCACACCTCTCATACCTCCTCTCTCCTCT
CCTCCACCCGTAGACCCCATACCCAAAATTCGCACTGCAAGGTGGAGCGC
AAGGCGAGGTCCATGCCTTGAAATCCCTTCCTTCCCTCCGTTCATCTCCC
ACGACCTCTATCGTGCGAGAAAGACCGGGTTGGAAGGGATAAGCTCTGTA
TCGGTCGCGAGACATCAACCATCACATCCCATCCCGTCATCCAATTTTTT
TGTCCTTTAGAACTCTCTAAAGGACAATCAATCAATCCTCCCCATAACCG
GGTTTACCATCAAGCCCAGAAACCACCCCATTTTCAAACATCGGACTGAG
TCCTCTGCTCCTTTCCTTTTCTCTCCCTCGTGACTCGATACTGATCTATC
CGTCCGTATTTCTGTCCATGCGTTCTCGCAAAGATGGAGGTTTTATATCT
CCTATCTGGACAGATCTGGACGGAGCTGCCTACATCAGTATCAGATATGA
GTGGATGGGACTAAGGACTGCTGATATTGGG back to topCoding sequence (CDS) from alignment at ch2:1373408..1376288+ >KJC3_001991-T1 ID=KJC3_001991-T1|Name=KJC3_001991-T1|organism=Aspergillus niger KJC3|type=CDS|length=3948bp|location=Sequence derived from alignment at ch2:1373408..1376288+ (Aspergillus niger KJC3)
ATGCCGTCCTTTCCATCTCGACCTCTAGTCCGGCCGAGGGACGATGGACT
CCAGTTAAGCTATCAACTGCCTCATCGTGTACACGCAGCTACAGGCTACC
CCCTCCTGGCCCCCAATGGCTCGTCGATCGTTGTTTACGGTTATGAGACT
GGACTGAAGGTAGTCTGGAGGGGAGGAAGACACTTTTCCACCGAGAAGCC
TTCTGCCCCGAAAGTGGACAAACCGCAGAAAGCCAGCAACGCCAATGATG
ATGCGGTCATGATTATTGATTCCGATGAGGAGAGCATGGCGGAGACCCAG
CAGACTCAGCAAGATGAAGAGCCAACCTACCAGTTCGAAGAGGACGAAAC
CGAGGTGGACCCCTTCCACCCTTACGACGATGTCTTGCGCCAGCTTGATA
TACCCCTTGGAAGCAGAGTCCTCCAGCTGGCTGTGCCTCGTGTCCTCCCC
GAAACAGCGCGCTCTTCGCTCGATCCATTTCCCCCGGCTTTGAAGAAGGA
CATCATCATCGCCGCTGTGTGCGCAGACTATTCTACTCGCATTGTAACTC
TGCCTTTGCTGCCCCCTCACCCTACGCAAAGCGACTTCAGCATTCAGACG
ATCTCAATTAGTGGTGGAGTATCACACCAGGAGATCCCGCGGGGAGTTAG
CATCGCCTTCACCTATCAAGAAATTGATCAGCAAGATCAGGATACATCTT
CAAACCATGGTTCATCCCGCTCGTCTACAGGAAGGTGGGACCTCCTCGTC
GCAACACATTCGGCTGAGTCGTCTGGTCTCTTGATCATTCATCGGATTCC
GGTCGCAGAGGAGGAGAAGGCGCGCGGCACTGCATATCGTTTATGCGATG
ATGAGATTGAGACTAAGCGACGGCACTTGCCCGCCCCTGCTGTGAATATC
TCTTTCAATCCCTCGGGTTACCCTGCCCTTCGACACTCCACGTTGCTAGT
TGCGTTCCACAGCGGCTGTGTCAAGGTATACTCTTGCTTCTCCACGAAAC
CACTCAAAGCCTCGCGGAGGTCGTCCGGTGCCCAGAGCGAATTTGAGACC
GTCGACACGGAAGGGAAATGGTTGATCAGTCTGTACCCCGGTTTTGAGCA
ATCTGCTTCGGGACTCCCTCGACGGAAGATCATCACTCACGCAGAATGGG
TGCTTGGAGGGCGTGCCATCTTGGTCCTCACGTCGGATGGCGAATGGGGT
GTCTGGGATTTGGAAGGGGCTGGCCCCGGGACCATCAAAGGTCCGCTTCA
GCGACAGTCCAGTGTGCAGGGAGTAACAGGTGGTTCACTGACAACGTTTT
CCGTCAGCGGTCGGATTCTGAGTCCCCTGCCTGGCGCCAGTCGTTCTGAG
ACAAGCGGACCTTCCTTCGAACAACGGCCCAAATTTGCGCCCTTGACGCC
GTCTACGAAGCGTCTGCGCGAAGACACGCTGCTCAAAGGCGCCTCCGTTG
GAACAGCCAGCCCATCCCTGAGTGGAGGGATCTCAGTGTATCAGACTAAC
TCCTGGAGGGACGCGCTGCCCGATGAATCGATTTTGCTGCAGCATGGAAA
CCAAAGCGCAGTCATTCCCAGTCTGCTCTCCTTGTGGCGCAACGCTGTCA
AGGCTAGTGGCACCTTCGATTCATCCAACCGCTGCCGGGTGTCTCCCCTC
CAAGATATCACCCTAGTGGGTGAGCGCCTGAAAGGCATCGGACACCTCCC
TGCGGCGACCCGCTCTACTCGCACACAGCCATTTGATATGCTTCTCACGG
CCGAACATCGACTTGTGATCCTCGCCCCACGGTTGACTGAGCCAGCACCA
GCACCCGTTACCGAATACATCCCCGAGCCCGCCACTCAGGAAACAGACCA
GCAGATGCTCCAAAGGGGGCAGCTCGGCGTGGAAGGAATGGACCGACTCC
TTAGTGGCATGGCGAGCACGAATCGCTCACTCCGTATGGGAAGTCCCATC
AAGCGAGCGCGGGTCTTCACTTAAATGCCGTCCTTTCCATCTCGACCTCT
AGTCCGGCCGAGGGACGATGGACTCCAGTTAAGCTATCAACTGCCTCATC
GTGTACACGCAGCTACAGGCTACCCCCTCCTGGCCCCCAATGGCTCGTCG
ATCGTTGTTTACGGTTATGAGACTGGACTGAAGGTAGTCTGGAGGGGAGG
AAGACACTTTTCCACCGAGAAGCCTTCTGCCCCGAAAGTGGACAAACCGC
AGAAAGCCAGCAACGCCAATGATGATGCGGTCATGATTATTGATTCCGAT
GAGGAGAGCATGGCGGAGACCCAGCAGACTCAGCAAGATGAAGAGCCAAC
CTACCAGTTCGAAGAGGACGAAACCGAGGTGGACCCCTTCCACCCTTACG
ACGATGTCTTGCGCCAGCTTGATATACCCCTTGGAAGCAGAGTCCTCCAG
CTGGCTGTGCCTCGTGTCCTCCCCGAAACAGCGCGCTCTTCGCTCGATCC
ATTTCCCCCGGCTTTGAAGAAGGACATCATCATCGCCGCTGTGTGCGCAG
ACTATTCTACTCGCATTGTAACTCTGCCTTTGCTGCCCCCTCACCCTACG
CAAAGCGACTTCAGCATTCAGACGATCTCAATTAGTGGTGGAGTATCACA
CCAGGAGATCCCGCGGGGAGTTAGCATCGCCTTCACCTATCAAGAAATTG
ATCAGCAAGATCAGGATACATCTTCAAACCATGGTTCATCCCGCTCGTCT
ACAGGAAGGTGGGACCTCCTCGTCGCAACACATTCGGCTGAGTCGTCTGG
TCTCTTGATCATTCATCGGATTCCGGTCGCAGAGGAGGAGAAGGCGCGCG
GCACTGCATATCGTTTATGCGATGATGAGATTGAGACTAAGCGACGGCAC
TTGCCCGCCCCTGCTGTGAATATCTCTTTCAATCCCTCGGGTTACCCTGC
CCTTCGACACTCCACGTTGCTAGTTGCGTTCCACAGCGGCTGTGTCAAGG
TATACTCTTGCTTCTCCACGAAACCACTCAAAGCCTCGCGGAGGTCGTCC
GGTGCCCAGAGCGAATTTGAGACCGTCGACACGGAAGGGAAATGGTTGAT
CAGTCTGTACCCCGGTTTTGAGCAATCTGCTTCGGGACTCCCTCGACGGA
AGATCATCACTCACGCAGAATGGGTGCTTGGAGGGCGTGCCATCTTGGTC
CTCACGTCGGATGGCGAATGGGGTGTCTGGGATTTGGAAGGGGCTGGCCC
CGGGACCATCAAAGGTCCGCTTCAGCGACAGTCCAGTGTGCAGGGAGTAA
CAGGTGGTTCACTGACAACGTTTTCCGTCAGCGGTCGGATTCTGAGTCCC
CTGCCTGGCGCCAGTCGTTCTGAGACAAGCGGACCTTCCTTCGAACAACG
GCCCAAATTTGCGCCCTTGACGCCGTCTACGAAGCGTCTGCGCGAAGACA
CGCTGCTCAAAGGCGCCTCCGTTGGAACAGCCAGCCCATCCCTGAGTGGA
GGGATCTCAGTGTATCAGACTAACTCCTGGAGGGACGCGCTGCCCGATGA
ATCGATTTTGCTGCAGCATGGAAACCAAAGCGCAGTCATTCCCAGTCTGC
TCTCCTTGTGGCGCAACGCTGTCAAGGCTAGTGGCACCTTCGATTCATCC
AACCGCTGCCGGGTGTCTCCCCTCCAAGATATCACCCTAGTGGGTGAGCG
CCTGAAAGGCATCGGACACCTCCCTGCGGCGACCCGCTCTACTCGCACAC
AGCCATTTGATATGCTTCTCACGGCCGAACATCGACTTGTGATCCTCGCC
CCACGGTTGACTGAGCCAGCACCAGCACCCGTTACCGAATACATCCCCGA
GCCCGCCACTCAGGAAACAGACCAGCAGATGCTCCAAAGGGGGCAGCTCG
GCGTGGAAGGAATGGACCGACTCCTTAGTGGCATGGCGAGCACGAATCGC
TCACTCCGTATGGGAAGTCCCATCAAGCGAGCGCGGGTCTTCACTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001991-T1.utr5p1 | KJC3_001991-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001991-T1.utr3p1 | KJC3_001991-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1373408..1376288 + |
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