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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1380652..1382836- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001993-T1 ID=KJC3_001993-T1|Name=KJC3_001993-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2185bp|location=Sequence derived from alignment at ch2:1380652..1382836- (Aspergillus niger KJC3)
CGTCAGGGGCTGCCGGGGCAGAGACTAAACCCAATTGGGACCATCGCAGA
GGGCAGTCCAAGCATGAGTCCATCATAGTACTTACTAACTACTAGTCGTA
GTACTAGTCACAATCACCTCCAGGGGAAAAAAGGTGCCCTCCGAAACCGC
GGGGAACTGGCGATGGCTTTCCGAAACATCCACTAGAAGGCGCCTGGAAT
GGACCTGCATTGAGGCTGGGAAATAGTATCCAAGAAAAGAAGCATAAAAA
GAAGGCGAATCTGCTTCAGGTTGAAGGTTCATCGATGGTGCTGGCCCACC
GACAGCCTCACTTTCACTGACCCGTTCATTCATTCATTTACTTCCCTTCC
CAGTCCACTGAAACTACTACTGCTACTACTATTACTATCACTTACCCTCC
TGTTACTATTTAGTCTACAGTACTACTACTACTACTACCACCACCACCAA
GTTGGCTTTGAACTCTCCGCCCTCAAACCTTAAAAAGGCCATTGCGATCT
CCCAACTCTTACCACGGATCCTCCCCCCGTCTCTTATTGTTGCACGACTT
GGTTCATCATAAGTAGACCAGCCAATTCACTGCCCCGCAGATCCATCCGT
TTCTTTTCTCAAACCATCTTATTATTTGCTTCCTCAATCTTTCGCATCCA
GATCGACATCCTTACCGCAGCATCTCCTTGAACGATCATACCCTTCCTAA
ATCGCGTTATCTACCTCTATCGTTTATCGCGTTTTACATTGGGCAGACGC
CCCTCCAATTTGTGAATAGTCAACTTCGATCGAGCTTTACCAGAACAAGA
TGACGACTCCAACTCTGATCAATCTCCCTCCCCCGCCATCTGATCCAGTG
ACTCCATCGGACATGGGGCCGTAAGTTCCCCAGCTTCTTCATGCTTTCAT
TCTGATCTTGTCATGCAGCATTCCACCTTCATCTTCATTTCTTCATTTTT
TTTTCAGGCTAGTACCTTTACAAGATCAAGCTGACAAGAAGTTTGCGACG
CACTAGAGGGACCCCGAACTCCGGTACGACTTCGTTGTCGGCCTTGTCAA
CAACCGCCATCAAGGATGGCCATCAGGGTCAGCCTCATCCTCACGGTCGT
CACGCCCACCACTCCCATTCCGCATCCGCTACATCCACCACCACGCTGGA
AGCAGAACGCGCCGACCGGATCTCGCGTTTAGCAGGCCTGGAACGAGTGG
CTACGGCACGGGCGGGTGGCAATCCACAGCCTACGGGCATGGTGGCAGGG
ACTCAATACCCCGGCTACTTTGACAGTGGCTCTGGGATCAAAGAAAGAAG
CACGGTAGGTAGTGCCAGTGCGACAGGCAGCGTGGGCGCCCGCACGACCT
GGGCCAGTGGCAGTGATGCGTTCGATGCAGACCGAATGAGTGAGTACCCG
GAGGACGGGACGTCCAGTGTTGGCAACTACAGTGATGAAGGAGACGCTAG
CCTGGTGGCATTCGGAGAAGGTGCCAGTACTATTAGTGGCCCAACTTCAC
ATCCGCTGCTGAACCGAACGTCATCGGGACATCGACCGAGCTCCTTGGGT
AGCCCTGGAGTGAGTCGTGCGAGCGCATTCGCATCCCACAGTCAGCAACA
CTCTGGGGAGGGCGCGATGCTGCTGTCGACCCAGTCGCCGACCGGATCCG
TGACACCGGAACCTACACAAGATGCGCGGATGGTCGATGGGATGACGTTC
GACTCGGATGTGATTGACACTACTGTGAGGACCCCGCGATTGGCCACTCC
CGCTCAAGGTGGCGAGCCGACTTTTTGAATTAGTAGGTTTGCTTCTTCTG
CAAGTAAAAGGGAGACCGACAGACAGACCGATGAACATAAGGTCGGGGTT
GCCCAAAGGATAGGATTACGGGCGTTTCCTGCAAAGTGTTTTCCCGCTTC
ACTAAGTTCATGGGTTTTGGCATTGTAATTGTACGGGAAAAGAATGGGAC
ATAGTTCTTTGCTGGGGAGGAGGGAAGGAGGATATGATCAATATTGGCGA
GGGAGGCTTTTTTGTGGGCTCTAGGTCAATTTACGTCTTTCTCTATTACG
AGAGAGAGAGAGAGAGAGAGAGAGAGATCGGGTTATCTGCAACAAATATC
TACTTGTAGAATAGTTAGCTAGCAGCGAGTCATTTCTTACCATTTCTTCC
AGGTACTTAGTTTGTGAAGCAATTGAAAGTGCCCG back to topCoding sequence (CDS) from alignment at ch2:1380652..1382836- >KJC3_001993-T1 ID=KJC3_001993-T1|Name=KJC3_001993-T1|organism=Aspergillus niger KJC3|type=CDS|length=1686bp|location=Sequence derived from alignment at ch2:1380652..1382836- (Aspergillus niger KJC3)
AGGGACCCCGAACTCCGGTACGACTTCGTTGTCGGCCTTGTCAACAACCG
CCATCAAGGATGGCCATCAGGGTCAGCCTCATCCTCACGGTCGTCACGCC
CACCACTCCCATTCCGCATCCGCTACATCCACCACCACGCTGGAAGCAGA
ACGCGCCGACCGGATCTCGCGTTTAGCAGGCCTGGAACGAGTGGCTACGG
CACGGGCGGGTGGCAATCCACAGCCTACGGGCATGGTGGCAGGGACTCAA
TACCCCGGCTACTTTGACAGTGGCTCTGGGATCAAAGAAAGAAGCACGGT
AGGTAGTGCCAGTGCGACAGGCAGCGTGGGCGCCCGCACGACCTGGGCCA
GTGGCAGTGATGCGTTCGATGCAGACCGAATGAGTGAGTACCCGGAGGAC
GGGACGTCCAGTGTTGGCAACTACAGTGATGAAGGAGACGCTAGCCTGGT
GGCATTCGGAGAAGGTGCCAGTACTATTAGTGGCCCAACTTCACATCCGC
TGCTGAACCGAACGTCATCGGGACATCGACCGAGCTCCTTGGGTAGCCCT
GGAGTGAGTCGTGCGAGCGCATTCGCATCCCACAGTCAGCAACACTCTGG
GGAGGGCGCGATGCTGCTGTCGACCCAGTCGCCGACCGGATCCGTGACAC
CGGAACCTACACAAGATGCGCGGATGGTCGATGGGATGACGTTCGACTCG
GATGTGATTGACACTACTGTGAGGACCCCGCGATTGGCCACTCCCGCTCA
AGGTGGCGAGCCGACTTTTTGAATGACGACTCCAACTCTGATCAATCTCC
CTCCCCCGCCATCTGATCCAGTGACTCCATCGGACATGGGGCCAGGGACC
CCGAACTCCGGTACGACTTCGTTGTCGGCCTTGTCAACAACCGCCATCAA
GGATGGCCATCAGGGTCAGCCTCATCCTCACGGTCGTCACGCCCACCACT
CCCATTCCGCATCCGCTACATCCACCACCACGCTGGAAGCAGAACGCGCC
GACCGGATCTCGCGTTTAGCAGGCCTGGAACGAGTGGCTACGGCACGGGC
GGGTGGCAATCCACAGCCTACGGGCATGGTGGCAGGGACTCAATACCCCG
GCTACTTTGACAGTGGCTCTGGGATCAAAGAAAGAAGCACGGTAGGTAGT
GCCAGTGCGACAGGCAGCGTGGGCGCCCGCACGACCTGGGCCAGTGGCAG
TGATGCGTTCGATGCAGACCGAATGAGTGAGTACCCGGAGGACGGGACGT
CCAGTGTTGGCAACTACAGTGATGAAGGAGACGCTAGCCTGGTGGCATTC
GGAGAAGGTGCCAGTACTATTAGTGGCCCAACTTCACATCCGCTGCTGAA
CCGAACGTCATCGGGACATCGACCGAGCTCCTTGGGTAGCCCTGGAGTGA
GTCGTGCGAGCGCATTCGCATCCCACAGTCAGCAACACTCTGGGGAGGGC
GCGATGCTGCTGTCGACCCAGTCGCCGACCGGATCCGTGACACCGGAACC
TACACAAGATGCGCGGATGGTCGATGGGATGACGTTCGACTCGGATGTGA
TTGACACTACTGTGAGGACCCCGCGATTGGCCACTCCCGCTCAAGGTGGC
GAGCCGACTTTTTGAATGACGACTCCAACTCTGATCAATCTCCCTCCCCC
GCCATCTGATCCAGTGACTCCATCGGACATGGGGCC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001993-T1.utr3p1 | KJC3_001993-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001993-T1.utr5p1 | KJC3_001993-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1380652..1382836 - |
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