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KJC3_001994-T1, KJC3_001994-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001994-T1
Unique NameKJC3_001994-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1382940..1384437-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001994-T1 ID=KJC3_001994-T1|Name=KJC3_001994-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1498bp|location=Sequence derived from alignment at ch2:1382940..1384437- (Aspergillus niger KJC3)
ATCTCCACGTCCCTCGCTCCATCTTCCCCTCTTTTGACTTCTTGCTGTTC
AGTGCGTAACAAGTTCGTCTCCGGAGCTGTAAGCGCGAGTCTCAATTTGT
TCTAATCATCCCCAGGGCGGCTGTCCAGCGTGAATCCCGGTGCTACAGTA
CTCTCAGTCGACGGCTCGGTTCTAAAGCATCTATATTTTCCAGCCATGGC
CCACAATACCGGCGTTCCCCGCATAACTGATGCGACGAAAGGTACTGTCT
ACGTCGATGGCTTCAGAACTCCTTGAGAGCACTCACCGCTGACCTGTCTC
AGTATGGACGACTCTAATTACAAATACTGCCTACCTGTCGGGGCTGCTGA
CCCTAGAGTACTCCCTCCGTAAAGTGGGATCGAAATATCCGCTGATTGCT
CTCTACACGGACTCCTTCCCGGCGGAGGGCCATGCTGCTCTCGATGCCCG
TGGAATATTGAAGCAGCGTGTTCCCTATCTGCTGCCCTCAGTACCTAAGG
ACTACGTCAACGATGTACGCTTCTATGACTGCTGGAGCAAGCTTACGCCC
TTCTCTCTTGTGGAGTACGAGCGCGTTGTGCAGCTAGACAGTGACATGAT
GATTCTCCGGAATATGGACGAGTTGATGGAGCTCGAGTTGGACCCTCCAG
CACTGGCTGGGACAGGGAACCGTGTTTTTGCCGCCAGTCATGCCTGTGTC
TGTAACCCGCTGAAGAAGCCGCACTACCCTCCTGATTGGTATGAACGATC
CTTCTTCCATTCCCAATTCCTACGAGGACACGACTTCCCTGATAAGTATT
CGAGGACTAATGCACCACGGTCCAGGATTCCATCCAATTGCGCATACACA
TCCCAGCATGCCACTCCGGATGTCGCGCAGACCGACGGCGCATCACCCAC
GACCGGGCTGGGTATCCCCAACGGCGGTCTTCAGGTGGTCAACCCGTCCC
AAGAAGTCTATGATAAAATTTTGGCACAGCTGTCCTCGTCTGCGACCACT
AACTATGAATTTGCCGATCAATCCCTGCTATCGGATGTGTTCTTTGGACG
ATGGGTGGCGCTGCCATACATCTACAATGCGCTCAAAACCATGCGGTGGG
AGGGGATTCATGATGCGATCTGGCGAGACGAGAGCGTCAAGAATATGCAC
TATCTGCTTAACCCCAAACCGTGGGATGAGAGCGAGGCTGTCCGGTCGGG
TCTCGAACCTCGCTCAAGCCGGGAAGCGCCACACAGCTGGTGGTGGGACA
TTACAGAGGAGAGAGTGAAGGAGGAAAAGGCAAGAGGGGTAGATGACGGT
TTCTGAGTTTTTATGTTTATTTTTATTTATTTCCCCATTCTTGAACACGT
GAACGCCGCAGCGCTATCACAGCACATTAGACCTGCCTGTCACCATACGA
AACCAATGCTACAATAATAGAGTCATTCTTCGAGGGCCCAGATGGAACGG
GAATGCAAGCATGGCGTACATTCATTCCGGGTTGTGATGTGAAAGGGT
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Coding sequence (CDS) from alignment at ch2:1382940..1384437-

>KJC3_001994-T1 ID=KJC3_001994-T1|Name=KJC3_001994-T1|organism=Aspergillus niger KJC3|type=CDS|length=2100bp|location=Sequence derived from alignment at ch2:1382940..1384437- (Aspergillus niger KJC3)
TATGGACGACTCTAATTACAAATACTGCCTACCTGTCGGGGCTGCTGACC
CTAGAGTACTCCCTCCGTAAAGTGGGATCGAAATATCCGCTGATTGCTCT
CTACACGGACTCCTTCCCGGCGGAGGGCCATGCTGCTCTCGATGCCCGTG
GAATATTGAAGCAGCGTGTTCCCTATCTGCTGCCCTCAGTACCTAAGGAC
TACGTCAACGATGTACGCTTCTATGACTGCTGGAGCAAGCTTACGCCCTT
CTCTCTTGTGGAGTACGAGCGCGTTGTGCAGCTAGACAGTGACATGATGA
TTCTCCGGAATATGGACGAGTTGATGGAGCTCGAGTTGGACCCTCCAGCA
CTGGCTGGGACAGGGAACCGTGTTTTTGCCGCCAGTCATGCCTGTGTCTG
TAACCCGCTGAAGAAGCCGCACTACCCTCCTGATTGGTATGAACGATCCT
TCTTCCATTCCCAATTCCTACGAGGACACGACTTCCCTGATAAGTATTCG
AGGACTAATGCACCACGGTCCAGGATTCCATCCAATTGCGCATACACATC
CCAGCATGCCACTCCGGATGTCGCGCAGACCGACGGCGCATCACCCACGA
CCGGGCTGGGTATCCCCAACGGCGGTCTTCAGGTGGTCAACCCGTCCCAA
GAAGTCTATGATAAAATTTTGGCACAGCTGTCCTCGTCTGCGACCACTAA
CTATGAATTTGCCGATCAATCCCTGCTATCGGATGTGTTCTTTGGACGAT
GGGTGGCGCTGCCATACATCTACAATGCGCTCAAAACCATGCGGTGGGAG
GGGATTCATGATGCGATCTGGCGAGACGAGAGCGTCAAGAATATGCACTA
TCTGCTTAACCCCAAACCGTGGGATGAGAGCGAGGCTGTCCGGTCGGGTC
TCGAACCTCGCTCAAGCCGGGAAGCGCCACACAGCTGGTGGTGGGACATT
ACAGAGGAGAGAGTGAAGGAGGAAAAGGCAAGAGGGGTAGATGACGGTTT
CTGAATGGCCCACAATACCGGCGTTCCCCGCATAACTGATGCGACGAAAG
TATGGACGACTCTAATTACAAATACTGCCTACCTGTCGGGGCTGCTGACC
CTAGAGTACTCCCTCCGTAAAGTGGGATCGAAATATCCGCTGATTGCTCT
CTACACGGACTCCTTCCCGGCGGAGGGCCATGCTGCTCTCGATGCCCGTG
GAATATTGAAGCAGCGTGTTCCCTATCTGCTGCCCTCAGTACCTAAGGAC
TACGTCAACGATGTACGCTTCTATGACTGCTGGAGCAAGCTTACGCCCTT
CTCTCTTGTGGAGTACGAGCGCGTTGTGCAGCTAGACAGTGACATGATGA
TTCTCCGGAATATGGACGAGTTGATGGAGCTCGAGTTGGACCCTCCAGCA
CTGGCTGGGACAGGGAACCGTGTTTTTGCCGCCAGTCATGCCTGTGTCTG
TAACCCGCTGAAGAAGCCGCACTACCCTCCTGATTGGTATGAACGATCCT
TCTTCCATTCCCAATTCCTACGAGGACACGACTTCCCTGATAAGTATTCG
AGGACTAATGCACCACGGTCCAGGATTCCATCCAATTGCGCATACACATC
CCAGCATGCCACTCCGGATGTCGCGCAGACCGACGGCGCATCACCCACGA
CCGGGCTGGGTATCCCCAACGGCGGTCTTCAGGTGGTCAACCCGTCCCAA
GAAGTCTATGATAAAATTTTGGCACAGCTGTCCTCGTCTGCGACCACTAA
CTATGAATTTGCCGATCAATCCCTGCTATCGGATGTGTTCTTTGGACGAT
GGGTGGCGCTGCCATACATCTACAATGCGCTCAAAACCATGCGGTGGGAG
GGGATTCATGATGCGATCTGGCGAGACGAGAGCGTCAAGAATATGCACTA
TCTGCTTAACCCCAAACCGTGGGATGAGAGCGAGGCTGTCCGGTCGGGTC
TCGAACCTCGCTCAAGCCGGGAAGCGCCACACAGCTGGTGGTGGGACATT
ACAGAGGAGAGAGTGAAGGAGGAAAAGGCAAGAGGGGTAGATGACGGTTT
CTGAATGGCCCACAATACCGGCGTTCCCCGCATAACTGATGCGACGAAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001994KJC3_001994Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001994-T1KJC3_001994-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001994-T1.cdsKJC3_001994-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001994-T1.utr3p1KJC3_001994-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001994-T1.exon2KJC3_001994-T1.exon2Aspergillus niger KJC3exon
KJC3_001994-T1.exon1KJC3_001994-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001994-T1.utr5p1KJC3_001994-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteCAZy:GT8
DBxrefInterPro:IPR029044
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1382940..1384437 -
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