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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1387361..1389361+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001996-T1 ID=KJC3_001996-T1|Name=KJC3_001996-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2001bp|location=Sequence derived from alignment at ch2:1387361..1389361+ (Aspergillus niger KJC3)
CTCGGATCCTGCGATGACAGCGGACGATGGTTGGCGGCCGATGCGCTCAG
ATGCATTAGCGCAGCAACCCTTCACCATCCCTCCAACTTACTTATCCCAA
GCCCCTCCAGAGATCATGAGCTCGCCTTGGATGTCAGTCAAGAGCACCAT
ATCCCGGCTGTTGGCTGGGTTAAGCATCCGAATGGATGTTTCGTCAACGG
TGGCTACCTGGCTCTCTCTCGCCGTTACGGTGGTAGGGCTGGGCTCCATT
GTCCACCCAATTTGGGACAATCATCGATCAGACTGACCCCTTCCACACCC
TGCGAGATGTACAGCACCTGGGTCGCTGGCGGTTCTGGCAGCCACACGTT
CCTTGGTATAGAGTCGTGAAGCCCCCTCTTGTCGGGCCTGTGATCAACGC
CAATCTGCCATGCGGGCTCTGTGGCAGAAAGACTGTCCATGTCAGTCGAC
GGCCACTTGCGCAGCCAACTGGTAAGGCTGCATGGTCCATCCTGCTCAAC
GTCATTCATCCACCTTCTACCACCCCCGAGGAGCCCTCCCAGACCGGGTC
GTTAGTCTCTACCAAAAGCCCCTTCAAGACTGAGCACGTCGTGACCATCT
CCGGAGAACCGCCCGTCCAGCTGCCAACCTGGGATAGCCTTCCTCGAGGC
CCTCTCACCAAGCACAAGCTAACCGCTTGCACGGTCATCTCTCGCGCAAC
CCTCATGGCTCTATTCACCGTGACCAATGCTCGACCAGTGTTTCGGCACA
GCGGCGCATCTGGCCATCGAGCCGCCTATGCCTCCTACTGCGGACAATGG
TACGTCGAATGGCCCATTGGCGACGCCGCACACGTCCACTTCGCGGCCCA
CGATTCGCACACGCTGAACAAAGACGTCTACCCTCCAACCTTTGAAGTAC
GTGTCGACCGCTGTCTGCGCATGCTAGCCGGGGTCATCGAAAGTCCTGCG
TCCTCTCCACCATTCAAATGCGCCTTCCCCGGCCGCAAAGCATCGGGCAG
ATGGATTCTCGAACACATCGTTCGAGGCTTCGGCGGCGCCCACGGCAGCA
GACACCTCTACAACATGATTGGAGGCAACGTCAATGAAGTCGATCTTCTA
TTGATGAAGCCCATCACCGAGGACAATAATGACTACGACATATCATCAGA
ACTCGAATCCACTTCCATTACTCTCTCCCTTCCCAGCACTGAATCCAACC
CCCGCCACCAAACCACCACCACCCACTCCGTAACCCTCCACATCCCACCC
CACGAAACCACCATCCTCAACACCTGCCTCGACTACCTCCCCTGGACCTC
CCTCTCCTGGTCCATCCACCGCGGCCTCCGCGACATCCTCCTCGCCTTCG
CCAAACCACGCATGAACCACTACCGCGCTCGACTCGCTCATACCCTCCGC
ACCACCGTCTCCACACACGCAGACCGGCTCATTGCCCGCGGCTGGGACGC
CCAGTTCGTCCGCAATGGCAGCATGGCCGACCTAGCCGCGGGTGCCGTGT
TAGCCGGGAGCGGCAATTCCGGGGATGCGGTGCGCATCGTCACGGATATA
GCGGCGGTATGGTGTGAGGGGCGAGGAAATGGTGATGGGTTGGCTGTCAT
ATCGTTGGATGAGACGATGTTTTGGAGGGTTCCCCACCAGCCGGTGGAAG
AAGTAAATAGAGAAGGTGGTGATAGTGGAGAGTTAAGTTCCATGGCTGTT
GTGGCGCTAGTCAAGTTCTTTGTTTTGGAATGGAGTGTGGACTTGGATTA
TCAGATGTATCATGATTTACCGTTGGAGCTGTATTTGGGCTAGATTTATT
GCATGTTTCCTTGATGTCTTGCTGTTTCTTTCTAGACCTTTTCGTGGTTA
TTGATATTGTGGTGGTGGTGGTTGCTGTTGGTATTCATTACTGTGGATAG
TGGTAAGAGTAAACCAATTCATCGTCTTTGAGTCATCCTCCTCTGGAGGG
GTTGCATGCACGAATTCTCTATAGAGAGAAATCTACTAAGGGTATCATTA
C back to topCoding sequence (CDS) from alignment at ch2:1387361..1389361+ >KJC3_001996-T1 ID=KJC3_001996-T1|Name=KJC3_001996-T1|organism=Aspergillus niger KJC3|type=CDS|length=1089bp|location=Sequence derived from alignment at ch2:1387361..1389361+ (Aspergillus niger KJC3)
ATGGCTCTATTCACCGTGACCAATGCTCGACCAGTGTTTCGGCACAGCGG
CGCATCTGGCCATCGAGCCGCCTATGCCTCCTACTGCGGACAATGGTACG
TCGAATGGCCCATTGGCGACGCCGCACACGTCCACTTCGCGGCCCACGAT
TCGCACACGCTGAACAAAGACGTCTACCCTCCAACCTTTGAAGTACGTGT
CGACCGCTGTCTGCGCATGCTAGCCGGGGTCATCGAAAGTCCTGCGTCCT
CTCCACCATTCAAATGCGCCTTCCCCGGCCGCAAAGCATCGGGCAGATGG
ATTCTCGAACACATCGTTCGAGGCTTCGGCGGCGCCCACGGCAGCAGACA
CCTCTACAACATGATTGGAGGCAACGTCAATGAAGTCGATCTTCTATTGA
TGAAGCCCATCACCGAGGACAATAATGACTACGACATATCATCAGAACTC
GAATCCACTTCCATTACTCTCTCCCTTCCCAGCACTGAATCCAACCCCCG
CCACCAAACCACCACCACCCACTCCGTAACCCTCCACATCCCACCCCACG
AAACCACCATCCTCAACACCTGCCTCGACTACCTCCCCTGGACCTCCCTC
TCCTGGTCCATCCACCGCGGCCTCCGCGACATCCTCCTCGCCTTCGCCAA
ACCACGCATGAACCACTACCGCGCTCGACTCGCTCATACCCTCCGCACCA
CCGTCTCCACACACGCAGACCGGCTCATTGCCCGCGGCTGGGACGCCCAG
TTCGTCCGCAATGGCAGCATGGCCGACCTAGCCGCGGGTGCCGTGTTAGC
CGGGAGCGGCAATTCCGGGGATGCGGTGCGCATCGTCACGGATATAGCGG
CGGTATGGTGTGAGGGGCGAGGAAATGGTGATGGGTTGGCTGTCATATCG
TTGGATGAGACGATGTTTTGGAGGGTTCCCCACCAGCCGGTGGAAGAAGT
AAATAGAGAAGGTGGTGATAGTGGAGAGTTAAGTTCCATGGCTGTTGTGG
CGCTAGTCAAGTTCTTTGTTTTGGAATGGAGTGTGGACTTGGATTATCAG
ATGTATCATGATTTACCGTTGGAGCTGTATTTGGGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001996-T1.utr5p1 | KJC3_001996-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001996-T1.utr3p1 | KJC3_001996-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1387361..1389361 + |
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