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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1389631..1391841- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001997-T1 ID=KJC3_001997-T1|Name=KJC3_001997-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2211bp|location=Sequence derived from alignment at ch2:1389631..1391841- (Aspergillus niger KJC3)
TCTGTCATTCCCCTCTGTGTCTCTCTCTCACTCTCCCTCTCCGTCTCCCT
CTTCCCTCCCTCCCTCTCCTTCTCTTCCATCCAATCCTTCCCTCCTTTTC
CTTGCTCTCATGGTCAGTGCTGCCCTTCTCCTCCGCGATGTCTGGATTAA
ATCCTTTCCGCCCTAAGAAGCCCGAGAGTGAGTCCGTCCGGCGGTTCCGG
TTCCTGCGCACCGTTCGTCGCGTGCTGGTCGGACGAGATGGACGGAGCTG
TCCCTGACCCATGATGCTGACCTCCCCATCCCCAGATACCTTCGCTGCTC
CTGCTCCTGCTCCTGCGCCGGCGCCTCCTCTGCCTCCGTTCCAATCTCAA
CCTCAGCCCTCCTTTACCTCGCATCCCTCGAAGCCCGTTCCCTCCGTGAC
CTTCCCTTCCACCTCCTTCCGCTCAGTCCCTCGAACCCCTCCCGCATCCT
TGACCCCGGATCCCGACGATACGGCCTCCTCCGATGACCAGTCTGCTTCG
GATCCCTTCCACCAGCACTCGTATGCGACCGATGACGATGGAGAGGTGGA
GGACCAAGAGGACATTGATGACTTAGACTTCAAACGCACCTACCAGGTCG
CTCACCCACCTTCCCGGGACGATGATCGCTCCCAGCCATCGATCAGGACC
GTTCCAGACCCAGCCTTATACTTCAGGAGATCCGCGCCGCCCGGAGCCAT
CACTCTCCCACCGCAGAGGAGCACCCATGATCGTCCAGCAGACCTGGACC
AGGCTGGCACGCCTCGCGAGAATGCGCCCGTAGCTGCTTCGAATGTGTCG
ACGCGTTCATCCACGTCCTACGGAGGCACCCGGACGCCCGACAGCAGCTC
CACGGATGTATCTCGACCTTCCGACCTGCGGACCGGACCAGCTACTCGAG
CTGGGTCGGGCTTGACCCCATCATTAGATCCCAGCTCACGTCCTCTTGCC
AGCCGTCCGGCTAACAGGGACCGGATACCTCCGCCTCCGCCCAAGAGTCA
TCATGGAAAACGGATCGCCCCTAGCCCTGGCGTCACACCCTCGCTCACCC
AGACCACCCCTGGCAAGGCGACCAACCGCTTCTCTTTCCATGGCTCCCCA
TCTGAGCCATCCTACTCCCCCCGGCCACCTCAATCGGGGTCCGACTATTT
CTCCGCTAAGCCCAAAGACGAGCCGCCGTCGACCGAGCAGTCGACAGAGT
CCCTCCGGCGGAGTCAATCGCAGCATAAGCGGCCCCCAACTCCGCCGCTG
AGTCGACGGCACAGTCAGATGAGACGGTCGAAGACCACCATGTCCAAAGT
CAACCCATTACGGTTATCCATCCATGTAGCACAGGCCTCGAGCGCGGCAT
CGTCGTCATCATCGCCGCCACCTAGTCCAAGTGGCTGGTCCCTGAACCCA
GCACGAACTCGGGAGTCCCGTACGGGCAGTACCCCGTCCGAGGAGCCCAT
GCATACTGCAACTTCAACCCTGCGTCCGGAGCCCTCTGCAGCCGCACCGG
TGTCGCCCACAGAAACGTCACAGTCGACGTCAACAGGATCGTCGACGAAG
CGGACCTCACTTTACAACCCCCTCCCCCCGCCTCCGCCGCCGCGACGCTC
TCGCGGATCGAGCAACCACAGCATTGACAGCAGTGGCCAGAGTCTCCGAT
CGGGCAAACCAGCCGACGAGACAACGGCGGCGCCGGCAGCGCCAGCAGCG
CAGGACGAGTTCGTCCCGCATCCATCAAACGCCCATGATATCCTGGCCGA
TTTGAGCCGGTTACAGAAAGAAGTAGACGATTTGCGCGGGCATTACGAGA
GCCGAAAGGCCAGCCAATAGGCCGATTAAGAAGTCCAGCCCCGTAGGGTG
CTCGACTTAGTTCCTATCCCTATCTCTCTTTCCCTGTCCTTCTGCAGAAA
GTGCAAGTATTAAAAGAGGCACAGCCATCGTAGGGAGTGAGAGTGAGTGA
GTGAGTGTACATGGACATGTGAACGTGAATGAGTGATGAAGCATAGCGCT
TGGTTTTTTGTTCCCCTTTCATTCTTGAGTATAGTATATGTTTCTGTTGG
GTCAGTGAGGTCTGCAAATTATGCATGTGTTGTACTATCCCTCAATTAAC
TCCGAGAGACAACCGGTTGGTCATCTCATTTGCACCGTACTGGACTTGCG
TCATGGCCATAGCGAAACAAGAACTTCATCTGCAGGCCTGCACAAAGAAT
CGATAGGTAGC back to topCoding sequence (CDS) from alignment at ch2:1389631..1391841- >KJC3_001997-T1 ID=KJC3_001997-T1|Name=KJC3_001997-T1|organism=Aspergillus niger KJC3|type=CDS|length=3150bp|location=Sequence derived from alignment at ch2:1389631..1391841- (Aspergillus niger KJC3)
ATACCTTCGCTGCTCCTGCTCCTGCTCCTGCGCCGGCGCCTCCTCTGCCT
CCGTTCCAATCTCAACCTCAGCCCTCCTTTACCTCGCATCCCTCGAAGCC
CGTTCCCTCCGTGACCTTCCCTTCCACCTCCTTCCGCTCAGTCCCTCGAA
CCCCTCCCGCATCCTTGACCCCGGATCCCGACGATACGGCCTCCTCCGAT
GACCAGTCTGCTTCGGATCCCTTCCACCAGCACTCGTATGCGACCGATGA
CGATGGAGAGGTGGAGGACCAAGAGGACATTGATGACTTAGACTTCAAAC
GCACCTACCAGGTCGCTCACCCACCTTCCCGGGACGATGATCGCTCCCAG
CCATCGATCAGGACCGTTCCAGACCCAGCCTTATACTTCAGGAGATCCGC
GCCGCCCGGAGCCATCACTCTCCCACCGCAGAGGAGCACCCATGATCGTC
CAGCAGACCTGGACCAGGCTGGCACGCCTCGCGAGAATGCGCCCGTAGCT
GCTTCGAATGTGTCGACGCGTTCATCCACGTCCTACGGAGGCACCCGGAC
GCCCGACAGCAGCTCCACGGATGTATCTCGACCTTCCGACCTGCGGACCG
GACCAGCTACTCGAGCTGGGTCGGGCTTGACCCCATCATTAGATCCCAGC
TCACGTCCTCTTGCCAGCCGTCCGGCTAACAGGGACCGGATACCTCCGCC
TCCGCCCAAGAGTCATCATGGAAAACGGATCGCCCCTAGCCCTGGCGTCA
CACCCTCGCTCACCCAGACCACCCCTGGCAAGGCGACCAACCGCTTCTCT
TTCCATGGCTCCCCATCTGAGCCATCCTACTCCCCCCGGCCACCTCAATC
GGGGTCCGACTATTTCTCCGCTAAGCCCAAAGACGAGCCGCCGTCGACCG
AGCAGTCGACAGAGTCCCTCCGGCGGAGTCAATCGCAGCATAAGCGGCCC
CCAACTCCGCCGCTGAGTCGACGGCACAGTCAGATGAGACGGTCGAAGAC
CACCATGTCCAAAGTCAACCCATTACGGTTATCCATCCATGTAGCACAGG
CCTCGAGCGCGGCATCGTCGTCATCATCGCCGCCACCTAGTCCAAGTGGC
TGGTCCCTGAACCCAGCACGAACTCGGGAGTCCCGTACGGGCAGTACCCC
GTCCGAGGAGCCCATGCATACTGCAACTTCAACCCTGCGTCCGGAGCCCT
CTGCAGCCGCACCGGTGTCGCCCACAGAAACGTCACAGTCGACGTCAACA
GGATCGTCGACGAAGCGGACCTCACTTTACAACCCCCTCCCCCCGCCTCC
GCCGCCGCGACGCTCTCGCGGATCGAGCAACCACAGCATTGACAGCAGTG
GCCAGAGTCTCCGATCGGGCAAACCAGCCGACGAGACAACGGCGGCGCCG
GCAGCGCCAGCAGCGCAGGACGAGTTCGTCCCGCATCCATCAAACGCCCA
TGATATCCTGGCCGATTTGAGCCGGTTACAGAAAGAAGTAGACGATTTGC
GCGGGCATTACGAGAGCCGAAAGGCCAGCCAATAGATGTCTGGATTAAAT
CCTTTCCGCCCTAAGAAGCCCGAGAATACCTTCGCTGCTCCTGCTCCTGC
TCCTGCGCCGGCGCCTCCTCTGCCTCCGTTCCAATCTCAACCTCAGCCCT
CCTTTACCTCGCATCCCTCGAAGCCCGTTCCCTCCGTGACCTTCCCTTCC
ACCTCCTTCCGCTCAGTCCCTCGAACCCCTCCCGCATCCTTGACCCCGGA
TCCCGACGATACGGCCTCCTCCGATGACCAGTCTGCTTCGGATCCCTTCC
ACCAGCACTCGTATGCGACCGATGACGATGGAGAGGTGGAGGACCAAGAG
GACATTGATGACTTAGACTTCAAACGCACCTACCAGGTCGCTCACCCACC
TTCCCGGGACGATGATCGCTCCCAGCCATCGATCAGGACCGTTCCAGACC
CAGCCTTATACTTCAGGAGATCCGCGCCGCCCGGAGCCATCACTCTCCCA
CCGCAGAGGAGCACCCATGATCGTCCAGCAGACCTGGACCAGGCTGGCAC
GCCTCGCGAGAATGCGCCCGTAGCTGCTTCGAATGTGTCGACGCGTTCAT
CCACGTCCTACGGAGGCACCCGGACGCCCGACAGCAGCTCCACGGATGTA
TCTCGACCTTCCGACCTGCGGACCGGACCAGCTACTCGAGCTGGGTCGGG
CTTGACCCCATCATTAGATCCCAGCTCACGTCCTCTTGCCAGCCGTCCGG
CTAACAGGGACCGGATACCTCCGCCTCCGCCCAAGAGTCATCATGGAAAA
CGGATCGCCCCTAGCCCTGGCGTCACACCCTCGCTCACCCAGACCACCCC
TGGCAAGGCGACCAACCGCTTCTCTTTCCATGGCTCCCCATCTGAGCCAT
CCTACTCCCCCCGGCCACCTCAATCGGGGTCCGACTATTTCTCCGCTAAG
CCCAAAGACGAGCCGCCGTCGACCGAGCAGTCGACAGAGTCCCTCCGGCG
GAGTCAATCGCAGCATAAGCGGCCCCCAACTCCGCCGCTGAGTCGACGGC
ACAGTCAGATGAGACGGTCGAAGACCACCATGTCCAAAGTCAACCCATTA
CGGTTATCCATCCATGTAGCACAGGCCTCGAGCGCGGCATCGTCGTCATC
ATCGCCGCCACCTAGTCCAAGTGGCTGGTCCCTGAACCCAGCACGAACTC
GGGAGTCCCGTACGGGCAGTACCCCGTCCGAGGAGCCCATGCATACTGCA
ACTTCAACCCTGCGTCCGGAGCCCTCTGCAGCCGCACCGGTGTCGCCCAC
AGAAACGTCACAGTCGACGTCAACAGGATCGTCGACGAAGCGGACCTCAC
TTTACAACCCCCTCCCCCCGCCTCCGCCGCCGCGACGCTCTCGCGGATCG
AGCAACCACAGCATTGACAGCAGTGGCCAGAGTCTCCGATCGGGCAAACC
AGCCGACGAGACAACGGCGGCGCCGGCAGCGCCAGCAGCGCAGGACGAGT
TCGTCCCGCATCCATCAAACGCCCATGATATCCTGGCCGATTTGAGCCGG
TTACAGAAAGAAGTAGACGATTTGCGCGGGCATTACGAGAGCCGAAAGGC
CAGCCAATAGATGTCTGGATTAAATCCTTTCCGCCCTAAGAAGCCCGAGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001997-T1.utr3p1 | KJC3_001997-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001997-T1.utr5p1 | KJC3_001997-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1389631..1391841 - |
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