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KJC3_001998-T2, KJC3_001998-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001998-T2
Unique NameKJC3_001998-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1392009..1394893-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001998-T2 ID=KJC3_001998-T2|Name=KJC3_001998-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2885bp|location=Sequence derived from alignment at ch2:1392009..1394893- (Aspergillus niger KJC3)
CACCGACTTGTTCATACATCCGGAGTCCACAACTCAGGAGTCGGGCCAAC
CTGAATGGTGTTGCACCAGAGAGTCTGGTTGGTTGGAGGCTCATGATATA
AGGAGGCGAAGTTCGGGACGGCAACGATGATGGCACAGCATCGACTGGGA
ACTTTACTCATAAATTTACTTTGTAAGCCGGGGGGGCTCTCTTGTCTCTC
ATTGCTCTTTCGTCCAGTGACAGTTTGGGCGTTTGTGATTTGAACCTTCA
TCTGCTTCAAATCTCTTTGGCTGCCCGTGAGTAGTGTTCCACACGTAACA
CCTTGTTTGAAGTACTTCACTGTTCGGAGGTGGTTGGTGGTTTTGAATGA
ACATTCATTCATGACTCTTTTGCATCCTGCGGACACGACGCCACCGTGGG
TTATTTTCATCATTGTTAGTGATATAGCTGGGATGTGGGGGGGAAGAGCA
GCAGAGCTGTCATCATCATAATCATCATCATTATTATCAGCTTGGAGCTT
GCTGATACACGGGGAATATTAAATATAAAAAGGGGAATAGTTATCTGCTG
CTACATCTGCTGATTCACATCATCACCATCATCACCATCATCGTCATTCA
TCAGCGGGTGTGAGTGTATAAAAGGGTAAGGAAGGGAAAACGAAACGAAA
CTCTCTGTAACGGAAAGGCAGCAATATGACTGAATGTGGTTTAGACCAGT
GATTCTCACGCGTTTCCCGTCGATCGGCGACCGCCAAATCCGCCCTTCCC
AATCCATAATAATTTCCTGGCATTCCGTCAGGCAGCTCATTCCACTGCAT
CATCGATCAGCTCTCCCTGCTTCTGTCTATTTCTTCGTCCTCCTCTTTCT
CCTTCCTACCTCCTCTCCCTTCCAGACTACACCTCTGCCATAAATGTTTT
ACCTCGCTTGAATGCCTCTGGTACATCAGAAAGGGAGATGCCGTGGACTG
TGACAAACTCATTCAAGCGGTACGTTGTGAAATCATGCCCCTGCTCCTTA
ATTCCCTTATCCCTTGGTTGCCGCCACTCCAACTAACGCGCTCCCCTCTT
GGGTTCCCCCCCACGCAGAGGTCTCATGATGAAAACTTACGGACGGCCAC
TCTGGCGCGTTTATGACGATGACCAACGGCCTGCCGCCAAAAAACGACGC
GTTCAATCCGGCAATGATTCCGACGAAGCCGAAAATAGCATTCAATATGC
CATCCGCGAGTCTTCCGCCGCCATCATGTCCAGTCCGTCGCGTCGCAATT
CCATTCTTCTCTCCGAAGGCACTCAGGAAGATGATCTGTCGACACCCCCA
TCTTCTCCCCCACCGCGATTAAGCCCCCCTCCCGCCAACACGCGGAAACC
CACGTTTGCCTTCCTGAAGCGTAAACAGTCCGCCACCAAGGATGCCAGCA
ATGGCACCCCCGTTACGAACGGCACCACCACCACCACCAACGGCACGACC
AATGGCACCCCACTCACCGAGGTCAACTCCAACAGCGTGCGCGCCTCGGT
GGATCCACCCAAGAAGAAAGCGCCGCAGCCGCAGCAGCCGCCGGTCTTGA
AGCAGATGCAGATCGACCTGGGCCACGAAGTACGGAGGACGTGTGCAACT
TGTGGCATGGAATATGTGCCATCGAACACGGAAGATGCGGCGTTGCATAA
GAAATTCCATGACATGAACTCTACCGGGGTGGATCTGGGGAAGGCCTTCA
TGCGGGCCAACGCATCACGCTGGGTCTACGAAGCTACACGGTTTGACGAG
GGATATGTGGTCATTGTGGATCGCAAGGCATCGCCGACCGCAAAGAACCA
AGCGAAGAAGGTGCTGGAAGTTATTTGCAAGGAGCTGTCATCCCCGACGA
TCGAGGACGAGGTCCTGTGGAGTCAGACGGAAGCGCCCAAGCATCTGCAA
CAGAACGGAGTACCGGAGAAGGTGGACCGGTACAAGGTGTTTTTGCACAT
GAAGGACAGCCGATGTGTAGGGGCATGTTTGACGGAGCGGATTTGGGAGT
CACGGCCGGTCAAGAAATCGGCCGCTTCGGGCAATGGACCGGACTCGTCG
GTCACGGTGGGGGAGGAAAGACATCCGGCCATTGTGGGCATCTCGCGCAT
ATGGACATCGGGCTCTTCACGCCGGAAAGGTATTGCCATGGATCTGTTAG
ACTGCGTGGTGAGCAACTTCATCTACGGGATGGAAATCCCCAAGGAGCAG
GTGGCGTTCAGCCAACCGACTGAAAGTGGCAAAGGGTTGGCGCAGTCATT
TTTCGGCAACGAAGAGTGGCATGTTTACGAGGAAAGCTAAGACGACAACA
ATAGACTACGGAAAGAAACAAGAGATTGCATTTGATTTCTTTTTGTTTGC
ATGGTTGGGGACTGAAAGGGGGGAGAGAGGGGAGGAAGACCGACGGGCGG
ACATTGTTTTCGTGATACACGGGCGAGTTGATACCCAGGCTTTCTCGGGC
ATTGACCTTCGAGGGAGGGCTTACTCTTGTGACGACTATTTGTGATTGCA
CGCGTTCATTTGAGATTTTTTTCCTTTTTATTATTTTTTTATTTTTCATT
CTTAACTGACTGTATAACTGGAAGAGGTGTTTATTGGGAGGGTCCGTCGG
GTTCCGCGTGGCTTGGTATATTCTTCGACTACCGATCTACCATTCTTCAC
TGTACCATATATATATCCTTATTTCTTTTTTCTTTCTTCTTTCTTTTTAT
TCATTCTTACCCGCGATATTATTATCTTTTTTTTTTATTCGTTTTCCCTT
TGTTTACAATATATGTATGTGTGGGAGAAAGAGTGAAAGTGAACATGAGG
AGTGGAAGAGAGGGCAAATACGACCCAGGCAGAATGCAGCATGTGAGAGT
GATTCCAGACTACGATTTACCGGCATATACTATGC
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Coding sequence (CDS) from alignment at ch2:1392009..1394893-

>KJC3_001998-T2 ID=KJC3_001998-T2|Name=KJC3_001998-T2|organism=Aspergillus niger KJC3|type=CDS|length=2508bp|location=Sequence derived from alignment at ch2:1392009..1394893- (Aspergillus niger KJC3)
AGGTCTCATGATGAAAACTTACGGACGGCCACTCTGGCGCGTTTATGACG
ATGACCAACGGCCTGCCGCCAAAAAACGACGCGTTCAATCCGGCAATGAT
TCCGACGAAGCCGAAAATAGCATTCAATATGCCATCCGCGAGTCTTCCGC
CGCCATCATGTCCAGTCCGTCGCGTCGCAATTCCATTCTTCTCTCCGAAG
GCACTCAGGAAGATGATCTGTCGACACCCCCATCTTCTCCCCCACCGCGA
TTAAGCCCCCCTCCCGCCAACACGCGGAAACCCACGTTTGCCTTCCTGAA
GCGTAAACAGTCCGCCACCAAGGATGCCAGCAATGGCACCCCCGTTACGA
ACGGCACCACCACCACCACCAACGGCACGACCAATGGCACCCCACTCACC
GAGGTCAACTCCAACAGCGTGCGCGCCTCGGTGGATCCACCCAAGAAGAA
AGCGCCGCAGCCGCAGCAGCCGCCGGTCTTGAAGCAGATGCAGATCGACC
TGGGCCACGAAGTACGGAGGACGTGTGCAACTTGTGGCATGGAATATGTG
CCATCGAACACGGAAGATGCGGCGTTGCATAAGAAATTCCATGACATGAA
CTCTACCGGGGTGGATCTGGGGAAGGCCTTCATGCGGGCCAACGCATCAC
GCTGGGTCTACGAAGCTACACGGTTTGACGAGGGATATGTGGTCATTGTG
GATCGCAAGGCATCGCCGACCGCAAAGAACCAAGCGAAGAAGGTGCTGGA
AGTTATTTGCAAGGAGCTGTCATCCCCGACGATCGAGGACGAGGTCCTGT
GGAGTCAGACGGAAGCGCCCAAGCATCTGCAACAGAACGGAGTACCGGAG
AAGGTGGACCGGTACAAGGTGTTTTTGCACATGAAGGACAGCCGATGTGT
AGGGGCATGTTTGACGGAGCGGATTTGGGAGTCACGGCCGGTCAAGAAAT
CGGCCGCTTCGGGCAATGGACCGGACTCGTCGGTCACGGTGGGGGAGGAA
AGACATCCGGCCATTGTGGGCATCTCGCGCATATGGACATCGGGCTCTTC
ACGCCGGAAAGGTATTGCCATGGATCTGTTAGACTGCGTGGTGAGCAACT
TCATCTACGGGATGGAAATCCCCAAGGAGCAGGTGGCGTTCAGCCAACCG
ACTGAAAGTGGCAAAGGGTTGGCGCAGTCATTTTTCGGCAACGAAGAGTG
GCATGTTTACGAGGAAAGCTAAATGCCGTGGACTGTGACAAACTCATTCA
AGCGAGGTCTCATGATGAAAACTTACGGACGGCCACTCTGGCGCGTTTAT
GACGATGACCAACGGCCTGCCGCCAAAAAACGACGCGTTCAATCCGGCAA
TGATTCCGACGAAGCCGAAAATAGCATTCAATATGCCATCCGCGAGTCTT
CCGCCGCCATCATGTCCAGTCCGTCGCGTCGCAATTCCATTCTTCTCTCC
GAAGGCACTCAGGAAGATGATCTGTCGACACCCCCATCTTCTCCCCCACC
GCGATTAAGCCCCCCTCCCGCCAACACGCGGAAACCCACGTTTGCCTTCC
TGAAGCGTAAACAGTCCGCCACCAAGGATGCCAGCAATGGCACCCCCGTT
ACGAACGGCACCACCACCACCACCAACGGCACGACCAATGGCACCCCACT
CACCGAGGTCAACTCCAACAGCGTGCGCGCCTCGGTGGATCCACCCAAGA
AGAAAGCGCCGCAGCCGCAGCAGCCGCCGGTCTTGAAGCAGATGCAGATC
GACCTGGGCCACGAAGTACGGAGGACGTGTGCAACTTGTGGCATGGAATA
TGTGCCATCGAACACGGAAGATGCGGCGTTGCATAAGAAATTCCATGACA
TGAACTCTACCGGGGTGGATCTGGGGAAGGCCTTCATGCGGGCCAACGCA
TCACGCTGGGTCTACGAAGCTACACGGTTTGACGAGGGATATGTGGTCAT
TGTGGATCGCAAGGCATCGCCGACCGCAAAGAACCAAGCGAAGAAGGTGC
TGGAAGTTATTTGCAAGGAGCTGTCATCCCCGACGATCGAGGACGAGGTC
CTGTGGAGTCAGACGGAAGCGCCCAAGCATCTGCAACAGAACGGAGTACC
GGAGAAGGTGGACCGGTACAAGGTGTTTTTGCACATGAAGGACAGCCGAT
GTGTAGGGGCATGTTTGACGGAGCGGATTTGGGAGTCACGGCCGGTCAAG
AAATCGGCCGCTTCGGGCAATGGACCGGACTCGTCGGTCACGGTGGGGGA
GGAAAGACATCCGGCCATTGTGGGCATCTCGCGCATATGGACATCGGGCT
CTTCACGCCGGAAAGGTATTGCCATGGATCTGTTAGACTGCGTGGTGAGC
AACTTCATCTACGGGATGGAAATCCCCAAGGAGCAGGTGGCGTTCAGCCA
ACCGACTGAAAGTGGCAAAGGGTTGGCGCAGTCATTTTTCGGCAACGAAG
AGTGGCATGTTTACGAGGAAAGCTAAATGCCGTGGACTGTGACAAACTCA
TTCAAGCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001998KJC3_001998Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001998-T2KJC3_001998-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001998-T2.cdsKJC3_001998-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001998-T2.utr3p1KJC3_001998-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001998-T2.exon2KJC3_001998-T2.exon2Aspergillus niger KJC3exon
KJC3_001998-T2.exon1KJC3_001998-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001998-T2.utr5p1KJC3_001998-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR028005
DBxrefInterPro:IPR028009
DBxrefPFAM:PF13878
DBxrefPFAM:PF13880
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1392009..1394893 -
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