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KJC3_002002-T1, KJC3_002002-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002002-T1
Unique NameKJC3_002002-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1406720..1407683-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002002-T1 ID=KJC3_002002-T1|Name=KJC3_002002-T1|organism=Aspergillus niger KJC3|type=mRNA|length=964bp|location=Sequence derived from alignment at ch2:1406720..1407683- (Aspergillus niger KJC3)
ATGGCTCTCAAGAGAATTAACAAGGAACTCACTGACCTCGGCCGGTAAGC
CTCGTCCTTCGTCATCTCGTTCCCCTCGTCTGCCTCTTTGCCGCCGCCTG
GTGCTACAACCCCCACCACGGCCGCGGGGCGTCCGTCTGACCCTCCGCCA
GACAGCGCCTCTGTCATGACGCATTGCCAGGGCATGTATAGAACTACGCT
AACGTGGGTTTCTTCGTTTTACAGTGATCCCCCCTCTTCCTGCTCTGCTG
GTCCTTCCGGAGATGACCTGGTATGGTTTCACCCCTCCGAACCCCTCGTT
ACACACGGTCGCATTGCCGCTTTCGCCGACTGCGGCGGGGCAGCCCAACG
CAGATTTACCCTAGAACCCTCTATCAACGACATTCAATGCCTAGAAATGA
ATACTGACAATTAGTTTCTGCTGCACAGTTCCACTGGCAAGCAACTATCA
TGGGTCCTGTGAGTAATCCCGGATTTCTTTGGTGGTCGTCCGGATGCAGC
AAGTGTCTTTGTTCCCTTGTTCAGGAGGACCTTGCGGCACCCAACGGCGT
TTGATAGCAGGAATACTTTGCTAACGCGACTTCCAGGGTGACTCCCCCTA
CTCAGGAGGTGTTTTCTTCCTGAACATCCACTTCCCCACCGACTACCCAT
TCAAGCCCCCGAAGGTCAACTTCACCACCCGGATTTACCACCCCAACATC
AACGCCAACGGCAGCATCTGTCTTGACATTCTCAGAGACCAGTGGAGTCC
TGCTCTCACGATCTCCAAGGGTATGTTTCCTTCTGCCTGCAGAGCTATTG
ACGCATATACTAATCTGCTTCCAGTGCTCCTTTCGATCTGCTCTATGCTC
ACAGACCCCAACCCCGACGACCCGTTGGTGCCGGAAATCGCTCACGTGTA
CAAGACGGACCGTCCCCGGTACGAAGCGACCGCGCGGGAATGGACTCGCA
AATATGCCATCTGA
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Coding sequence (CDS) from alignment at ch2:1406720..1407683-

>KJC3_002002-T1 ID=KJC3_002002-T1|Name=KJC3_002002-T1|organism=Aspergillus niger KJC3|type=CDS|length=2220bp|location=Sequence derived from alignment at ch2:1406720..1407683- (Aspergillus niger KJC3)
TGCTCCTTTCGATCTGCTCTATGCTCACAGACCCCAACCCCGACGACCCG
TTGGTGCCGGAAATCGCTCACGTGTACAAGACGGACCGTCCCCGGTACGA
AGCGACCGCGCGGGAATGGACTCGCAAATATGCCATCTGAGGTGACTCCC
CCTACTCAGGAGGTGTTTTCTTCCTGAACATCCACTTCCCCACCGACTAC
CCATTCAAGCCCCCGAAGGTCAACTTCACCACCCGGATTTACCACCCCAA
CATCAACGCCAACGGCAGCATCTGTCTTGACATTCTCAGAGACCAGTGGA
GTCCTGCTCTCACGATCTCCAAGGTTCCACTGGCAAGCAACTATCATGGG
TCCTTGATCCCCCCTCTTCCTGCTCTGCTGGTCCTTCCGGAGATGACCTG
ATGGCTCTCAAGAGAATTAACAAGGAACTCACTGACCTCGGCCGTGCTCC
TTTCGATCTGCTCTATGCTCACAGACCCCAACCCCGACGACCCGTTGGTG
CCGGAAATCGCTCACGTGTACAAGACGGACCGTCCCCGGTACGAAGCGAC
CGCGCGGGAATGGACTCGCAAATATGCCATCTGAGGTGACTCCCCCTACT
CAGGAGGTGTTTTCTTCCTGAACATCCACTTCCCCACCGACTACCCATTC
AAGCCCCCGAAGGTCAACTTCACCACCCGGATTTACCACCCCAACATCAA
CGCCAACGGCAGCATCTGTCTTGACATTCTCAGAGACCAGTGGAGTCCTG
CTCTCACGATCTCCAAGGTTCCACTGGCAAGCAACTATCATGGGTCCTTG
ATCCCCCCTCTTCCTGCTCTGCTGGTCCTTCCGGAGATGACCTGATGGCT
CTCAAGAGAATTAACAAGGAACTCACTGACCTCGGCCGTGCTCCTTTCGA
TCTGCTCTATGCTCACAGACCCCAACCCCGACGACCCGTTGGTGCCGGAA
ATCGCTCACGTGTACAAGACGGACCGTCCCCGGTACGAAGCGACCGCGCG
GGAATGGACTCGCAAATATGCCATCTGAGGTGACTCCCCCTACTCAGGAG
GTGTTTTCTTCCTGAACATCCACTTCCCCACCGACTACCCATTCAAGCCC
CCGAAGGTCAACTTCACCACCCGGATTTACCACCCCAACATCAACGCCAA
CGGCAGCATCTGTCTTGACATTCTCAGAGACCAGTGGAGTCCTGCTCTCA
CGATCTCCAAGGTTCCACTGGCAAGCAACTATCATGGGTCCTTGATCCCC
CCTCTTCCTGCTCTGCTGGTCCTTCCGGAGATGACCTGATGGCTCTCAAG
AGAATTAACAAGGAACTCACTGACCTCGGCCGTGCTCCTTTCGATCTGCT
CTATGCTCACAGACCCCAACCCCGACGACCCGTTGGTGCCGGAAATCGCT
CACGTGTACAAGACGGACCGTCCCCGGTACGAAGCGACCGCGCGGGAATG
GACTCGCAAATATGCCATCTGAGGTGACTCCCCCTACTCAGGAGGTGTTT
TCTTCCTGAACATCCACTTCCCCACCGACTACCCATTCAAGCCCCCGAAG
GTCAACTTCACCACCCGGATTTACCACCCCAACATCAACGCCAACGGCAG
CATCTGTCTTGACATTCTCAGAGACCAGTGGAGTCCTGCTCTCACGATCT
CCAAGGTTCCACTGGCAAGCAACTATCATGGGTCCTTGATCCCCCCTCTT
CCTGCTCTGCTGGTCCTTCCGGAGATGACCTGATGGCTCTCAAGAGAATT
AACAAGGAACTCACTGACCTCGGCCGTGCTCCTTTCGATCTGCTCTATGC
TCACAGACCCCAACCCCGACGACCCGTTGGTGCCGGAAATCGCTCACGTG
TACAAGACGGACCGTCCCCGGTACGAAGCGACCGCGCGGGAATGGACTCG
CAAATATGCCATCTGAGGTGACTCCCCCTACTCAGGAGGTGTTTTCTTCC
TGAACATCCACTTCCCCACCGACTACCCATTCAAGCCCCCGAAGGTCAAC
TTCACCACCCGGATTTACCACCCCAACATCAACGCCAACGGCAGCATCTG
TCTTGACATTCTCAGAGACCAGTGGAGTCCTGCTCTCACGATCTCCAAGG
TTCCACTGGCAAGCAACTATCATGGGTCCTTGATCCCCCCTCTTCCTGCT
CTGCTGGTCCTTCCGGAGATGACCTGATGGCTCTCAAGAGAATTAACAAG
GAACTCACTGACCTCGGCCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC1_1KJC3_002002Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002002-T1KJC3_002002-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002002-T1.cdsKJC3_002002-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002002-T1.exon5KJC3_002002-T1.exon5Aspergillus niger KJC3exon
KJC3_002002-T1.exon4KJC3_002002-T1.exon4Aspergillus niger KJC3exon
KJC3_002002-T1.exon3KJC3_002002-T1.exon3Aspergillus niger KJC3exon
KJC3_002002-T1.exon2KJC3_002002-T1.exon2Aspergillus niger KJC3exon
KJC3_002002-T1.exon1KJC3_002002-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme E2 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1406720..1407683 -
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