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KJC3_002011-T1, KJC3_002011-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002011-T1
Unique NameKJC3_002011-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1436913..1438284+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002011-T1 ID=KJC3_002011-T1|Name=KJC3_002011-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1372bp|location=Sequence derived from alignment at ch2:1436913..1438284+ (Aspergillus niger KJC3)
TGCGCCTCATCCATCCATCCAGGCACTGGTGCGGCCCCGGACCTGGCCCG
GCTTTCAATCATTTGCTTTCCCGGTATTATGATCCTAGCATTTTGTTTGA
CTCACTTCTAGCTCTACTTGCCTCCCACGTTCCCCAATCATGAAAGCACG
GACGGTGCCGGCATCCGGGCTGGTGCTCTCGTCACGCGTCACGTCTTCCA
CGATAGTTTGCTGGCAATGCCTCCGAAACGAATTGGTTGCAAATCAATTT
CAGCTTCAATCACGAAAGTATCACCCGACAAAACGTAAGGATGTGTCGCC
GCTGGGTGCCGCCGTCTCTGCAGCTCAGACCATCTTCAAAGGCCTCCCCA
AGGCACCTCCGGGCATTTCCGTCGACCCATTGCGGATGGTAGGAAAGGAA
CTCAAATTCTTGACGAAGAACCTTCGGCAGCTACTGGGATCCGGCCATCC
TACACTGGATAAGGTGGCCAAATACTACACCCGCAGTGAGGGTAAACACA
TGCGGCCGCTTCTGGTGCTGCTGATGTCTCAGGCGACGGCGCTGTGTCCC
CGGAAGACTGGCACGGACAACAATTCCGCAACAGTGAACGACCCGATCAG
CTCGCCCTCAATCCTCGTCGATAACAATCCGGACCTGGATGCGCTCTCAT
CCGGTAGTGCAGATGCGCCGTACGACTTTGCCGGCGACAAGGACATCCTG
CCCACCCAGCGGCGGCTTGCTGAAATCACCGAATTGATCCACACTGCGTC
CCTCCTGCACGACGACGTCATCGACAATGCTGTGTCCCGCCGTTCTTTAA
CGTCTGCCAACCTCCAATTTGGAAACAAGATGGCCGTTTTGGCGGGAGAC
TTCATGCTGGGTCGGGCCTCCGTCGCTCTCGCGCGGCTGAGGGACCCGGA
GGTCATTGAGTTGATGTCGACTGTCATCACCAACCTTGTTGAGGGCGAGT
TCATGCAGTTGAAGAACACGGCTGCGGACGAGAAGAACCCCGTTTTCACG
GACGACACCCTCTCGTATTACCTGCAGAAGACATACCTGAAGACGGGCAG
TTTGATCAGCAAGTCCTGCCGGTCGACTGCCGTGCTGGGTCACAGCGCCC
CCGAGGTCGTCGAAGCCTCCTACCAGTACGGACGCAACTTGGGACTGGCG
TTCCAGCTTGTGGACGATATGCTGGACTATACCGTGACCGAGGCTGAGTT
GGGCAAGCCAGCTGGCGCGGACCTGGAGCTGGGTCTTGCTACGGCCCCGC
TGCTCTTTGCCTGGAAACAGTTCCCAGAGCTTGGCCCGTTGGTTGGCCGG
AAGTTCAGCCAGCCCGGCGATGTTCAGAAGGTAATGCGATCCTAGTTGCA
ACAAATAAGTTTTGACACTAAC
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Coding sequence (CDS) from alignment at ch2:1436913..1438284+

>KJC3_002011-T1 ID=KJC3_002011-T1|Name=KJC3_002011-T1|organism=Aspergillus niger KJC3|type=CDS|length=1206bp|location=Sequence derived from alignment at ch2:1436913..1438284+ (Aspergillus niger KJC3)
ATGAAAGCACGGACGGTGCCGGCATCCGGGCTGGTGCTCTCGTCACGCGT
CACGTCTTCCACGATAGTTTGCTGGCAATGCCTCCGAAACGAATTGGTTG
CAAATCAATTTCAGCTTCAATCACGAAAGTATCACCCGACAAAACGTAAG
GATGTGTCGCCGCTGGGTGCCGCCGTCTCTGCAGCTCAGACCATCTTCAA
AGGCCTCCCCAAGGCACCTCCGGGCATTTCCGTCGACCCATTGCGGATGG
TAGGAAAGGAACTCAAATTCTTGACGAAGAACCTTCGGCAGCTACTGGGA
TCCGGCCATCCTACACTGGATAAGGTGGCCAAATACTACACCCGCAGTGA
GGGTAAACACATGCGGCCGCTTCTGGTGCTGCTGATGTCTCAGGCGACGG
CGCTGTGTCCCCGGAAGACTGGCACGGACAACAATTCCGCAACAGTGAAC
GACCCGATCAGCTCGCCCTCAATCCTCGTCGATAACAATCCGGACCTGGA
TGCGCTCTCATCCGGTAGTGCAGATGCGCCGTACGACTTTGCCGGCGACA
AGGACATCCTGCCCACCCAGCGGCGGCTTGCTGAAATCACCGAATTGATC
CACACTGCGTCCCTCCTGCACGACGACGTCATCGACAATGCTGTGTCCCG
CCGTTCTTTAACGTCTGCCAACCTCCAATTTGGAAACAAGATGGCCGTTT
TGGCGGGAGACTTCATGCTGGGTCGGGCCTCCGTCGCTCTCGCGCGGCTG
AGGGACCCGGAGGTCATTGAGTTGATGTCGACTGTCATCACCAACCTTGT
TGAGGGCGAGTTCATGCAGTTGAAGAACACGGCTGCGGACGAGAAGAACC
CCGTTTTCACGGACGACACCCTCTCGTATTACCTGCAGAAGACATACCTG
AAGACGGGCAGTTTGATCAGCAAGTCCTGCCGGTCGACTGCCGTGCTGGG
TCACAGCGCCCCCGAGGTCGTCGAAGCCTCCTACCAGTACGGACGCAACT
TGGGACTGGCGTTCCAGCTTGTGGACGATATGCTGGACTATACCGTGACC
GAGGCTGAGTTGGGCAAGCCAGCTGGCGCGGACCTGGAGCTGGGTCTTGC
TACGGCCCCGCTGCTCTTTGCCTGGAAACAGTTCCCAGAGCTTGGCCCGT
TGGTTGGCCGGAAGTTCAGCCAGCCCGGCGATGTTCAGAAGGTAATGCGA
TCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002011KJC3_002011Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002011-T1.utr5p1KJC3_002011-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002011-T1.exon1KJC3_002011-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002011-T1.cdsKJC3_002011-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002011-T1.utr3p1KJC3_002011-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002011-T1KJC3_002011-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092634B5
DBxrefInterPro:IPR008949
DBxrefInterPro:IPR033749
DBxrefInterPro:IPR000092
DBxrefPFAM:PF00348
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1436913..1438284 +
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