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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1442028..1443298- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002013-T1 ID=KJC3_002013-T1|Name=KJC3_002013-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1271bp|location=Sequence derived from alignment at ch2:1442028..1443298- (Aspergillus niger KJC3)
CACGTATATAAAACCCCAATTTCTCTCTCCTGTTTCCTCTCATCTACTCC
ATCCCTCGAGAATCCTCTGCCCTGAACTTCAATCACTCTATATCCCTCTC
TCTTCTTCCAAATTTCTACATCATCACCTTTCCCCATATACAGCCCATCC
GCCACCAAACCGTCACCAAGACACAATGACAACAACCACAAAACCCAACC
TCATCACCCTCCCCACCAAGCCCACCGCTCAACTAAGCTACACCTTCCAC
CCCTCGTCCACCCAATCATCCAACAACAAGATCCTCCTCGTCTTCCTCAA
CGGCCTCGCAGCCCCGCAAACCTCCTGGGGCCCCGTCATCCACCACCTGC
AATCCACCCACCCCCATAACCTCCCCGCCATCCTCACCTATGATCGCTAC
GGCCAAGGCCAAACTCCCTCCCGGGACCCGGCCGACCAGGACGCCCCTGA
CCCAAGCCACGGGCACGACATCCTCTCCGCCCTGGACGACCTCCACCAAC
TGATCCAGCAGATAGCCAAACTCCACCTGCACACATCAACATCCGCCCCA
GATCTAAATGTAATCCTAGTAGGCAACTCCCTCGGCTGCGCTCTCGCCAG
ACTCTACGCCCAAACATACCCGGGCACTGTGTCCGCCCTTCTCTTGCTCG
ACAGTATCCTGGCCAACTCGGATTTCGTGTCCGTATTTCCGGATCCTACT
GCGCCGGACTTTATTCCGCCGCAGGAGGAAGATGGCATCTCTGCTCAAGA
TCTGATTGTGGCGCGGGCTATCGCAGGGAAAGTCTTTCATCCCTCTGTGG
GGAGTAAGGAGGGTCTATCGAGGAGGAATCTGGCGGAGTTGTTGCCTGAG
AGTGATGGGCCGAGATTGGTGGGGCCTGATGATGAAAGGGGGCCTTGGGT
CACGGTCATTGGACATGATGGGAAGGCTTTTGCGGAGGAAAGTGTGAGAA
TGACCGGCGGGAAGGTGTCTGGGAGGGTGTTCGAAGTATATGTCACGCCG
TTTTGGGAGAAGTACCACCGGGGATTGTTGGGGATTACGGATGAGGGGAG
GGGGAGGGGCCCACTTGTTGCTGAGGGTGCTGGGCATGTGGTGCAATTGG
AGAATCCGGCATTCGTGGGAGAGGAGCTGGGGAGGTTGTTGGATAGGGTT
ATGGGGTGATACCTTGGTTCTTGTTCAGATGGCAGCATGAGTGACGTTGA
ATAGATGTTTCTGTTTCTGTGGGATTGTAGTGTAACCAGGTGCTAGTACA
CTCAATATCAATATATCTCAC back to topCoding sequence (CDS) from alignment at ch2:1442028..1443298- >KJC3_002013-T1 ID=KJC3_002013-T1|Name=KJC3_002013-T1|organism=Aspergillus niger KJC3|type=CDS|length=984bp|location=Sequence derived from alignment at ch2:1442028..1443298- (Aspergillus niger KJC3)
ATGACAACAACCACAAAACCCAACCTCATCACCCTCCCCACCAAGCCCAC
CGCTCAACTAAGCTACACCTTCCACCCCTCGTCCACCCAATCATCCAACA
ACAAGATCCTCCTCGTCTTCCTCAACGGCCTCGCAGCCCCGCAAACCTCC
TGGGGCCCCGTCATCCACCACCTGCAATCCACCCACCCCCATAACCTCCC
CGCCATCCTCACCTATGATCGCTACGGCCAAGGCCAAACTCCCTCCCGGG
ACCCGGCCGACCAGGACGCCCCTGACCCAAGCCACGGGCACGACATCCTC
TCCGCCCTGGACGACCTCCACCAACTGATCCAGCAGATAGCCAAACTCCA
CCTGCACACATCAACATCCGCCCCAGATCTAAATGTAATCCTAGTAGGCA
ACTCCCTCGGCTGCGCTCTCGCCAGACTCTACGCCCAAACATACCCGGGC
ACTGTGTCCGCCCTTCTCTTGCTCGACAGTATCCTGGCCAACTCGGATTT
CGTGTCCGTATTTCCGGATCCTACTGCGCCGGACTTTATTCCGCCGCAGG
AGGAAGATGGCATCTCTGCTCAAGATCTGATTGTGGCGCGGGCTATCGCA
GGGAAAGTCTTTCATCCCTCTGTGGGGAGTAAGGAGGGTCTATCGAGGAG
GAATCTGGCGGAGTTGTTGCCTGAGAGTGATGGGCCGAGATTGGTGGGGC
CTGATGATGAAAGGGGGCCTTGGGTCACGGTCATTGGACATGATGGGAAG
GCTTTTGCGGAGGAAAGTGTGAGAATGACCGGCGGGAAGGTGTCTGGGAG
GGTGTTCGAAGTATATGTCACGCCGTTTTGGGAGAAGTACCACCGGGGAT
TGTTGGGGATTACGGATGAGGGGAGGGGGAGGGGCCCACTTGTTGCTGAG
GGTGCTGGGCATGTGGTGCAATTGGAGAATCCGGCATTCGTGGGAGAGGA
GCTGGGGAGGTTGTTGGATAGGGTTATGGGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002013-T1.utr3p1 | KJC3_002013-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002013-T1.utr5p1 | KJC3_002013-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000073 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1442028..1443298 - |
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