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KJC3_002024-T1, KJC3_002024-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002024-T1
Unique NameKJC3_002024-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1469097..1469927+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002024-T1 ID=KJC3_002024-T1|Name=KJC3_002024-T1|organism=Aspergillus niger KJC3|type=mRNA|length=831bp|location=Sequence derived from alignment at ch2:1469097..1469927+ (Aspergillus niger KJC3)
AAGACGTCGTCCCATCTCTCCAACGTCACTCCTGCACCCCATCCACCTCC
AGCCATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCC
AGCAGCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAAC
AGCTCCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCG
CGAGAGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGGTGCGTATT
GAGATCAATTGATGCCGAGATCTTGCAAGGATGTGGTTGTGCTAACTCAA
TGGCTGTCTTACTGCTCCAGATCTGTGGCGCAAGCTCTCCATCTAGTATG
TGGGCTAGCTATTACTACCGCAATTGACTTCTAGTAACATTCTACTTTTT
CGCAGCGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAACGCCTACAA
CCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCCCGCTCGAGG
AGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAACTTCCCCTGG
GGAGACGGTGACAAGGTGCGTCCCGGACATTTTACTCTCATGCAATGCCA
ATCTGAGTGCTGACGATTTTATTTCTTTCTCCAGACCATCTTGTAAGTCC
CTTACACCCGAAATTTCCAGCGTCGGGCATAACTCGACAGTCAATAATAA
CGATGCCTTCTAACAAACTCACAGCTGGAACTCCGACGTCAACTACCACA
ACAAGGACAAGGCTACCTAAATGCCCGCCGTTGATTATGGGAGTACAGCG
TCTTTGATTGATCTTGACTGTTGACGGGAGG
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Coding sequence (CDS) from alignment at ch2:1469097..1469927+

>KJC3_002024-T1 ID=KJC3_002024-T1|Name=KJC3_002024-T1|organism=Aspergillus niger KJC3|type=CDS|length=2130bp|location=Sequence derived from alignment at ch2:1469097..1469927+ (Aspergillus niger KJC3)
ATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCCAGCA
GCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAACAGCT
CCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCGCGAG
AGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGATCTGTGGCGCAA
GCTCTCCATCTACGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAACG
CCTACAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCCCG
CTCGAGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAACTT
CCCCTGGGGAGACGGTGACAAGACCATCTTCTGGAACTCCGACGTCAACT
ACCACAACAAGGACAAGGCTACCTAAATGTTCCCTCAGCGCAACGCCCTT
CGTCTGTCTCAGCGCGCTGCCCAGCAGCTGCGTGCTGCTCCGGTTCGCTC
CACCGTCCAGCGCCGTCTCAACAGCTCCGACTCCAAGCTCCCCTCTTGGG
CCGTCGACAACGAATTCAACCGCGAGAGAGAGGCCGTCAAGCACCACGCT
GCTGCTACCAGTGATCTGTGGCGCAAGCTCTCCATCTACGCCGTCATTCC
TGTCCTGATTGCCGGAGGTATCAACGCCTACAACCTTTGGACTGAGCACT
GGGAACACTGGGCGCACATGCCCCCGCTCGAGGAGCGTACCGAGTACCCC
TACCAGAACATCCGTGTGAAGAACTTCCCCTGGGGAGACGGTGACAAGAC
CATCTTCTGGAACTCCGACGTCAACTACCACAACAAGGACAAGGCTACCT
AAATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCCAG
CAGCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAACAG
CTCCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCGCG
AGAGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGATCTGTGGCGC
AAGCTCTCCATCTACGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAA
CGCCTACAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCC
CGCTCGAGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAAC
TTCCCCTGGGGAGACGGTGACAAGACCATCTTCTGGAACTCCGACGTCAA
CTACCACAACAAGGACAAGGCTACCTAAATGTTCCCTCAGCGCAACGCCC
TTCGTCTGTCTCAGCGCGCTGCCCAGCAGCTGCGTGCTGCTCCGGTTCGC
TCCACCGTCCAGCGCCGTCTCAACAGCTCCGACTCCAAGCTCCCCTCTTG
GGCCGTCGACAACGAATTCAACCGCGAGAGAGAGGCCGTCAAGCACCACG
CTGCTGCTACCAGTGATCTGTGGCGCAAGCTCTCCATCTACGCCGTCATT
CCTGTCCTGATTGCCGGAGGTATCAACGCCTACAACCTTTGGACTGAGCA
CTGGGAACACTGGGCGCACATGCCCCCGCTCGAGGAGCGTACCGAGTACC
CCTACCAGAACATCCGTGTGAAGAACTTCCCCTGGGGAGACGGTGACAAG
ACCATCTTCTGGAACTCCGACGTCAACTACCACAACAAGGACAAGGCTAC
CTAAATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCC
AGCAGCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAAC
AGCTCCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCG
CGAGAGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGATCTGTGGC
GCAAGCTCTCCATCTACGCCGTCATTCCTGTCCTGATTGCCGGAGGTATC
AACGCCTACAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCC
CCCGCTCGAGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGA
ACTTCCCCTGGGGAGACGGTGACAAGACCATCTTCTGGAACTCCGACGTC
AACTACCACAACAAGGACAAGGCTACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005751mitochondrial respiratory chain complex IV
GO:0005743mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002024KJC3_002024Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002024-T1KJC3_002024-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002024-T1.utr5p1KJC3_002024-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002024-T1.exon1KJC3_002024-T1.exon1Aspergillus niger KJC3exon
KJC3_002024-T1.exon2KJC3_002024-T1.exon2Aspergillus niger KJC3exon
KJC3_002024-T1.exon3KJC3_002024-T1.exon3Aspergillus niger KJC3exon
KJC3_002024-T1.exon4KJC3_002024-T1.exon4Aspergillus niger KJC3exon
KJC3_002024-T1.exon5KJC3_002024-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002024-T1.cdsKJC3_002024-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002024-T1.utr3p1KJC3_002024-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092654RM
DBxrefInterPro:IPR018507
DBxrefInterPro:IPR036418
DBxrefInterPro:IPR001349
DBxrefPFAM:PF02046
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1469097..1469927 +
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