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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1485555..1487265+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002030-T1 ID=KJC3_002030-T1|Name=KJC3_002030-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1711bp|location=Sequence derived from alignment at ch2:1485555..1487265+ (Aspergillus niger KJC3)
CAGGCTGCAAAGGAGGTGTGATATCAATCAACAATGATCTACTTTCCTCA
CAGTGATTAGTCTCAGACCAGTACGTTAGTATTTGAGTTATAGTATTAAA
AATATATGATTCTGAGAATCAATCATAGTAAGCGACTAGAGGTCAACGAA
GCTAACTAGCTGCCTTCTGCCATGATCTCAACCATTGCGAAGCTGATATT
GCTCTCCCTTGCGTCGAGACCCTAGGCCCCATAGTTATGATGCAGGGAGA
AGCTCCTTGTGAGCGATTGATATAGAAACGACAGAACTTTCCATCGCCGA
AATAAACAAAAAGGCAAGTCAGTCGGGATCATCAGCAGCCGGCCATGTGA
CCGGGGGAGATGACATTAACTGGGAGTTTCCCGGTCATTGTTTTCCCCCT
CAGCTTCCTGTAAACAAACGCGCTGCAACACTTTTTCCTGAAAGACTTCG
GCAGCGATACGAGCACAAGATCAAGCTCAACATATACATAGCTTCATCGA
AACATCATTACTTGAATCGAACCCTTTGACTATCGGCGGAAGCACTGACA
ACAAATGGCCCCCGCACTAAAGGCGGGGCACTTCCAGACTCACGAGTCCC
CCGCATCCGGCACCATCATCATCCGCGACTCCCTCTATGGCGACCACTCC
ATCACCGAGCCCATCCTGGTCGACCTGCTCCAGTCGCCCGATCTTCGTCG
ACTGATTGGGATCTGCCAGCATGGTGTAACCGGACACCTCGGGCTCCTAC
CCAGGCAAGTTAAGATCACGCGCTTCGAGCATTCCGTCGGGGCATTCCTG
CTCGTCCGCATCGCCGGGGGAAGCGTCGAAGAACAGGTAACCGCTCTTCT
GCACGACATTAGCCACACCGTACTCAGCCATGTGGTTGACTGGGCGCTTT
CAAAACCAGGCGAGGAGAGTTACCATGAAGTCCATAAAGCACGGTATATT
CGTACGACGCAGATTCCCAAGATCCTAACCAAACATGGCGTTCCGCAGAC
TGTCTTGGATGAAGAGCAGTACCCGCTTGTTGAGATGGCGGCACCCCATC
TCTGCGCAGACAGACTCGATTACGCCCTGCGGGATATAGTTGCGTTTGGG
ATACTCCAGCTGAGTGATGCGCACAGGGTCGTCGCAAGTCTGAAAGCATT
CCCTGATGCATTGTCCCCGAATCGAATGCTTGTGCTCGGGGATCCGCAGG
CGGCACTAGACCTTGCCCGGGCGTATCTGGTTGCGGATCGGGAGGTGTGG
TCTAACCCGACACATGTTGAGATGTACAGAGGGACTGGGCAGTTGATAGG
GAATCTTGTTCACGAAGAACGGATCCACGAGAAGGTGTTGTGGAACACGT
CGGATGATCAGTTCTGGCAGTTGTTGAAGGATATTGCGGACCCGGAGGGG
TCGGAGATGCTGGAGAGGTTTGAGACTAAAGGACTGGTGGAGGAGGATGG
CTTGCGCCTACATAAACATGCCAAGGTTCGTACCATTGATCCTGATGTGT
GTGTGTCTGGCACAGAAGCAGTTGCGCTGTCGGTGGTGAATCCGGACTGG
GCTGCTGAGCGGGAGGATTATATCCGGAAAAGAGAGGCTACGCGAGAGGT
GTAATTGTAACATCACAACGGGATTTATGAGGTGGGTAGATTAATGGAAT
AATGAGTAACATAGCCATTTTCTACTTACTACTTGCTTGACTATCATGCT
GTTTACCTCCA back to topCoding sequence (CDS) from alignment at ch2:1485555..1487265+ >KJC3_002030-T1 ID=KJC3_002030-T1|Name=KJC3_002030-T1|organism=Aspergillus niger KJC3|type=CDS|length=1050bp|location=Sequence derived from alignment at ch2:1485555..1487265+ (Aspergillus niger KJC3)
ATGGCCCCCGCACTAAAGGCGGGGCACTTCCAGACTCACGAGTCCCCCGC
ATCCGGCACCATCATCATCCGCGACTCCCTCTATGGCGACCACTCCATCA
CCGAGCCCATCCTGGTCGACCTGCTCCAGTCGCCCGATCTTCGTCGACTG
ATTGGGATCTGCCAGCATGGTGTAACCGGACACCTCGGGCTCCTACCCAG
GCAAGTTAAGATCACGCGCTTCGAGCATTCCGTCGGGGCATTCCTGCTCG
TCCGCATCGCCGGGGGAAGCGTCGAAGAACAGGTAACCGCTCTTCTGCAC
GACATTAGCCACACCGTACTCAGCCATGTGGTTGACTGGGCGCTTTCAAA
ACCAGGCGAGGAGAGTTACCATGAAGTCCATAAAGCACGGTATATTCGTA
CGACGCAGATTCCCAAGATCCTAACCAAACATGGCGTTCCGCAGACTGTC
TTGGATGAAGAGCAGTACCCGCTTGTTGAGATGGCGGCACCCCATCTCTG
CGCAGACAGACTCGATTACGCCCTGCGGGATATAGTTGCGTTTGGGATAC
TCCAGCTGAGTGATGCGCACAGGGTCGTCGCAAGTCTGAAAGCATTCCCT
GATGCATTGTCCCCGAATCGAATGCTTGTGCTCGGGGATCCGCAGGCGGC
ACTAGACCTTGCCCGGGCGTATCTGGTTGCGGATCGGGAGGTGTGGTCTA
ACCCGACACATGTTGAGATGTACAGAGGGACTGGGCAGTTGATAGGGAAT
CTTGTTCACGAAGAACGGATCCACGAGAAGGTGTTGTGGAACACGTCGGA
TGATCAGTTCTGGCAGTTGTTGAAGGATATTGCGGACCCGGAGGGGTCGG
AGATGCTGGAGAGGTTTGAGACTAAAGGACTGGTGGAGGAGGATGGCTTG
CGCCTACATAAACATGCCAAGGTTCGTACCATTGATCCTGATGTGTGTGT
GTCTGGCACAGAAGCAGTTGCGCTGTCGGTGGTGAATCCGGACTGGGCTG
CTGAGCGGGAGGATTATATCCGGAAAAGAGAGGCTACGCGAGAGGTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002030-T1.utr5p1 | KJC3_002030-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002030-T1.utr3p1 | KJC3_002030-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003607 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1485555..1487265 + |
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