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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1504757..1505511+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002036-T1 ID=KJC3_002036-T1|Name=KJC3_002036-T1|organism=Aspergillus niger KJC3|type=mRNA|length=755bp|location=Sequence derived from alignment at ch2:1504757..1505511+ (Aspergillus niger KJC3)
ATGTCCATCGAAAACCTCAAGACCTTCGGTGAGTCGCTTCGCCACCTCCC
CTCCCCCCCTTCTGTGGACATCGTCACCCGGCCCGCAGTACTGCCTGCAG
CAGATGTTGGTCTTCCTAGCGATGGTCTTCCAAAAGATCATTGCGAAGTT
GGCTCTTCTTGCTAAGGCTTGGCTGTGTAGCCAGGGTTGTCCCTTTTGAT
CCAACTGCGTCACAAGTTGGCGGGGTAATACTTGTTCATGAGAGCCTGAG
GCTGACACGTGCTCTTCCACAGACCCCTTCGCCGAAGCTGACGAAGACAC
CGGCGAGACTAAACAGTCTCAAAATTACATCCATATACGGATTCAACGTA
CGTTCTATTGTCGTCCCCTCCACGTGGTGCCTTGACCCCTGTCATCGTCA
CTGGTGGCGCCACGCTGTCTTGTCATGCACCCATGACTAACATGTATCTG
TCCACAGAGCGCAATGGTCGTAAGACCTTGACTACCGTCCAGGGTCTTCC
TAAGAAGTTCGATCAGAAGAAGATCTTGAAGGTCATCAAGAAGAAGTTCG
GTATGTTGTCGCCTACTACCTACGTGCCTCGCCATGTCACTAACTTCCCT
TGTCAGCCTGCAATGGCACCATTGTCAACGACACTGAGATGGGCGAGGTG
ATTCAGCTGCAGGGAGACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGA
CAAGAAGGAGGGTCTCGAGCTGGACGCCAAGACCATCAAGGTCCACGGTT
TCTAA back to topCoding sequence (CDS) from alignment at ch2:1504757..1505511+ >KJC3_002036-T1 ID=KJC3_002036-T1|Name=KJC3_002036-T1|organism=Aspergillus niger KJC3|type=CDS|length=1380bp|location=Sequence derived from alignment at ch2:1504757..1505511+ (Aspergillus niger KJC3)
ATGTCCATCGAAAACCTCAAGACCTTCGACCCCTTCGCCGAAGCTGACGA
AGACACCGGCGAGACTAAACAGTCTCAAAATTACATCCATATACGGATTC
AACAGCGCAATGGTCGTAAGACCTTGACTACCGTCCAGGGTCTTCCTAAG
AAGTTCGATCAGAAGAAGATCTTGAAGGTCATCAAGAAGAAGTTCGCCTG
CAATGGCACCATTGTCAACGACACTGAGATGGGCGAGGTGATTCAGCTGC
AGGGAGACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAAGGAG
GGTCTCGAGCTGGACGCCAAGACCATCAAGGTCCACGGTTTCTAAATGTC
CATCGAAAACCTCAAGACCTTCGACCCCTTCGCCGAAGCTGACGAAGACA
CCGGCGAGACTAAACAGTCTCAAAATTACATCCATATACGGATTCAACAG
CGCAATGGTCGTAAGACCTTGACTACCGTCCAGGGTCTTCCTAAGAAGTT
CGATCAGAAGAAGATCTTGAAGGTCATCAAGAAGAAGTTCGCCTGCAATG
GCACCATTGTCAACGACACTGAGATGGGCGAGGTGATTCAGCTGCAGGGA
GACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAAGGAGGGTCT
CGAGCTGGACGCCAAGACCATCAAGGTCCACGGTTTCTAAATGTCCATCG
AAAACCTCAAGACCTTCGACCCCTTCGCCGAAGCTGACGAAGACACCGGC
GAGACTAAACAGTCTCAAAATTACATCCATATACGGATTCAACAGCGCAA
TGGTCGTAAGACCTTGACTACCGTCCAGGGTCTTCCTAAGAAGTTCGATC
AGAAGAAGATCTTGAAGGTCATCAAGAAGAAGTTCGCCTGCAATGGCACC
ATTGTCAACGACACTGAGATGGGCGAGGTGATTCAGCTGCAGGGAGACCA
GCGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAAGGAGGGTCTCGAGC
TGGACGCCAAGACCATCAAGGTCCACGGTTTCTAAATGTCCATCGAAAAC
CTCAAGACCTTCGACCCCTTCGCCGAAGCTGACGAAGACACCGGCGAGAC
TAAACAGTCTCAAAATTACATCCATATACGGATTCAACAGCGCAATGGTC
GTAAGACCTTGACTACCGTCCAGGGTCTTCCTAAGAAGTTCGATCAGAAG
AAGATCTTGAAGGTCATCAAGAAGAAGTTCGCCTGCAATGGCACCATTGT
CAACGACACTGAGATGGGCGAGGTGATTCAGCTGCAGGGAGACCAGCGTA
AAGATGTTCAGGAGTTCTTGACCGACAAGAAGGAGGGTCTCGAGCTGGAC
GCCAAGACCATCAAGGTCCACGGTTTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006413 | translational initiation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003743 | translation initiation factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036877 |
| DBxref | InterPro:IPR001950 |
| DBxref | InterPro:IPR005874 |
| DBxref | PFAM:PF01253 |
| Product | Eukaryotic translation initiation factor eIF-1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1504757..1505511 + |
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