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KJC3_002042-T1, KJC3_002042-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002042-T1
Unique NameKJC3_002042-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1519600..1520930-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002042-T1 ID=KJC3_002042-T1|Name=KJC3_002042-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1331bp|location=Sequence derived from alignment at ch2:1519600..1520930- (Aspergillus niger KJC3)
GATCAATCTACTCTTGTTGCGATCTCTTTCCCACACCTTTATTCTATACC
AATTTCTCATATATTTACTTTTATTCCCTCTAATTAAATACCTCTAATTC
ACAATGGGCGACAAGAAGCGCAAGCTCGCCGAGGAGGCCACCTCCCCCGA
AGTGAAGAAGGCCAAGCGTGAAGACAAGAAGGAGAAGAAGGAGAAGAAGG
AGCGCAAGGCAAAGGAAGTTGTCGAGGAGGTTCCTGTTGTTGAGAAGGAG
GAGAAGAAGGAAAAGAAGGAAAAGAAGGAAAAGAAGGAGAAGAAGGACAA
GAAGGAAAAGAAGGAGAAGAAAGAGAAGAAAGACAAGAAGGAAAAGAAGT
CCGAGCCCGAGCCCGAAGCCATGGACGTCGACGAGGCCCCCGCCGAGAAA
GAGAACCAGGAGCCCGAGGCCGAGCCGGAGGTGACCAAGGAAGAGAAGAA
GAAGGAAAAGAAGGAGAAGAAGGATAAGAAGGACAAGAAATCCAAGAAGG
AGAAGAAGCAGGGAGAAACGAATACCGAGGCTCAGCCTACCAGCGAACAG
ACCGAAGAGCCTGCTGAGCAGGAGGAGCAGCAGAATAAGAAGAATGTGCG
GTTTATCTGCTTTGTCGGTACGTATCCAACTCTTTCCCGATGCCCCATAT
AGACCCGACCAGATACTAATATAAATTCGTATAGGAAACCTCCCCTACTC
CGCCGACAAAGAGTCCCTCACCAAGCACTTCGAGAAGATCGCCCCCGTTT
CCGTCCGCGTAGCCACCCAGGTCGACAAGCCGACCAAGTGCCGCGGCTTC
GGCTTCATCGAGTTCGACAACTACGACCGCATGAAGACCTGTCTCAAGCT
GTACCATCACTCCATGTTCAACGATGGAAAGTACCCGCCGCGACGGATCA
ATGTGGAGCTGACGTGAGTTATACATACCGACTATTATATTCAGCAGCAA
ACTGACATATATGCTATGTAGTGCCGGCGGTGGCGGTAACTCCAAGGACC
GGAAAGACAAGATCGAGGCCAAGAACAAGAAGCTTTTCGAAGAGAGACAG
CGCAACGCCAAGGAAATTCAGAAGGAGAAGAAGCGGTTAGAGCAGGTCGA
GGAGACGGGTGTGGATGACTATGCTCATATTCATCCTAGTCGGAGGCCCC
GGATGGCTTAGACGTAGCGGATGATTATTGCTGCTGCTGTTGTTTGTTGT
CTTTTTGAACTCATTGGATTAAAAAGTATCTTGTCTTTGCTTGTTTGCTT
AAGAGATATCCTCTTCCGTTTCTCTTCCTGTTTCTGATGTGCATATTTTG
GATGATGATGAGAAGTCAAGCACGGAATATA
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Coding sequence (CDS) from alignment at ch2:1519600..1520930-

>KJC3_002042-T1 ID=KJC3_002042-T1|Name=KJC3_002042-T1|organism=Aspergillus niger KJC3|type=CDS|length=2799bp|location=Sequence derived from alignment at ch2:1519600..1520930- (Aspergillus niger KJC3)
TGCCGGCGGTGGCGGTAACTCCAAGGACCGGAAAGACAAGATCGAGGCCA
AGAACAAGAAGCTTTTCGAAGAGAGACAGCGCAACGCCAAGGAAATTCAG
AAGGAGAAGAAGCGGTTAGAGCAGGTCGAGGAGACGGGTGTGGATGACTA
TGCTCATATTCATCCTAGTCGGAGGCCCCGGATGGCTTAGGAAACCTCCC
CTACTCCGCCGACAAAGAGTCCCTCACCAAGCACTTCGAGAAGATCGCCC
CCGTTTCCGTCCGCGTAGCCACCCAGGTCGACAAGCCGACCAAGTGCCGC
GGCTTCGGCTTCATCGAGTTCGACAACTACGACCGCATGAAGACCTGTCT
CAAGCTGTACCATCACTCCATGTTCAACGATGGAAAGTACCCGCCGCGAC
GGATCAATGTGGAGCTGACATGGGCGACAAGAAGCGCAAGCTCGCCGAGG
AGGCCACCTCCCCCGAAGTGAAGAAGGCCAAGCGTGAAGACAAGAAGGAG
AAGAAGGAGAAGAAGGAGCGCAAGGCAAAGGAAGTTGTCGAGGAGGTTCC
TGTTGTTGAGAAGGAGGAGAAGAAGGAAAAGAAGGAAAAGAAGGAAAAGA
AGGAGAAGAAGGACAAGAAGGAAAAGAAGGAGAAGAAAGAGAAGAAAGAC
AAGAAGGAAAAGAAGTCCGAGCCCGAGCCCGAAGCCATGGACGTCGACGA
GGCCCCCGCCGAGAAAGAGAACCAGGAGCCCGAGGCCGAGCCGGAGGTGA
CCAAGGAAGAGAAGAAGAAGGAAAAGAAGGAGAAGAAGGATAAGAAGGAC
AAGAAATCCAAGAAGGAGAAGAAGCAGGGAGAAACGAATACCGAGGCTCA
GCCTACCAGCGAACAGACCGAAGAGCCTGCTGAGCAGGAGGAGCAGCAGA
ATAAGAAGAATGTGCGGTTTATCTGCTTTGTCGTGCCGGCGGTGGCGGTA
ACTCCAAGGACCGGAAAGACAAGATCGAGGCCAAGAACAAGAAGCTTTTC
GAAGAGAGACAGCGCAACGCCAAGGAAATTCAGAAGGAGAAGAAGCGGTT
AGAGCAGGTCGAGGAGACGGGTGTGGATGACTATGCTCATATTCATCCTA
GTCGGAGGCCCCGGATGGCTTAGGAAACCTCCCCTACTCCGCCGACAAAG
AGTCCCTCACCAAGCACTTCGAGAAGATCGCCCCCGTTTCCGTCCGCGTA
GCCACCCAGGTCGACAAGCCGACCAAGTGCCGCGGCTTCGGCTTCATCGA
GTTCGACAACTACGACCGCATGAAGACCTGTCTCAAGCTGTACCATCACT
CCATGTTCAACGATGGAAAGTACCCGCCGCGACGGATCAATGTGGAGCTG
ACATGGGCGACAAGAAGCGCAAGCTCGCCGAGGAGGCCACCTCCCCCGAA
GTGAAGAAGGCCAAGCGTGAAGACAAGAAGGAGAAGAAGGAGAAGAAGGA
GCGCAAGGCAAAGGAAGTTGTCGAGGAGGTTCCTGTTGTTGAGAAGGAGG
AGAAGAAGGAAAAGAAGGAAAAGAAGGAAAAGAAGGAGAAGAAGGACAAG
AAGGAAAAGAAGGAGAAGAAAGAGAAGAAAGACAAGAAGGAAAAGAAGTC
CGAGCCCGAGCCCGAAGCCATGGACGTCGACGAGGCCCCCGCCGAGAAAG
AGAACCAGGAGCCCGAGGCCGAGCCGGAGGTGACCAAGGAAGAGAAGAAG
AAGGAAAAGAAGGAGAAGAAGGATAAGAAGGACAAGAAATCCAAGAAGGA
GAAGAAGCAGGGAGAAACGAATACCGAGGCTCAGCCTACCAGCGAACAGA
CCGAAGAGCCTGCTGAGCAGGAGGAGCAGCAGAATAAGAAGAATGTGCGG
TTTATCTGCTTTGTCGTGCCGGCGGTGGCGGTAACTCCAAGGACCGGAAA
GACAAGATCGAGGCCAAGAACAAGAAGCTTTTCGAAGAGAGACAGCGCAA
CGCCAAGGAAATTCAGAAGGAGAAGAAGCGGTTAGAGCAGGTCGAGGAGA
CGGGTGTGGATGACTATGCTCATATTCATCCTAGTCGGAGGCCCCGGATG
GCTTAGGAAACCTCCCCTACTCCGCCGACAAAGAGTCCCTCACCAAGCAC
TTCGAGAAGATCGCCCCCGTTTCCGTCCGCGTAGCCACCCAGGTCGACAA
GCCGACCAAGTGCCGCGGCTTCGGCTTCATCGAGTTCGACAACTACGACC
GCATGAAGACCTGTCTCAAGCTGTACCATCACTCCATGTTCAACGATGGA
AAGTACCCGCCGCGACGGATCAATGTGGAGCTGACATGGGCGACAAGAAG
CGCAAGCTCGCCGAGGAGGCCACCTCCCCCGAAGTGAAGAAGGCCAAGCG
TGAAGACAAGAAGGAGAAGAAGGAGAAGAAGGAGCGCAAGGCAAAGGAAG
TTGTCGAGGAGGTTCCTGTTGTTGAGAAGGAGGAGAAGAAGGAAAAGAAG
GAAAAGAAGGAAAAGAAGGAGAAGAAGGACAAGAAGGAAAAGAAGGAGAA
GAAAGAGAAGAAAGACAAGAAGGAAAAGAAGTCCGAGCCCGAGCCCGAAG
CCATGGACGTCGACGAGGCCCCCGCCGAGAAAGAGAACCAGGAGCCCGAG
GCCGAGCCGGAGGTGACCAAGGAAGAGAAGAAGAAGGAAAAGAAGGAGAA
GAAGGATAAGAAGGACAAGAAATCCAAGAAGGAGAAGAAGCAGGGAGAAA
CGAATACCGAGGCTCAGCCTACCAGCGAACAGACCGAAGAGCCTGCTGAG
CAGGAGGAGCAGCAGAATAAGAAGAATGTGCGGTTTATCTGCTTTGTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002042KJC3_002042Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002042-T1KJC3_002042-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002042-T1.cdsKJC3_002042-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002042-T1.utr3p1KJC3_002042-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002042-T1.exon3KJC3_002042-T1.exon3Aspergillus niger KJC3exon
KJC3_002042-T1.exon2KJC3_002042-T1.exon2Aspergillus niger KJC3exon
KJC3_002042-T1.exon1KJC3_002042-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002042-T1.utr5p1KJC3_002042-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265DRM
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1519600..1520930 -
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