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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1527372..1528652- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002044-T1 ID=KJC3_002044-T1|Name=KJC3_002044-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1281bp|location=Sequence derived from alignment at ch2:1527372..1528652- (Aspergillus niger KJC3)
TACGCTTGTCACAGCTAATCCTGTGCCATTGAAGAATACGTCTCGGCCGT
ACCTCTGAAATACTGTCCAGCGATCGCAAATCATGTCTGACGGAACTCCC
AAGCCGTCCGGCCTCGCCGCTAAGGTGGACAAGAAGCGCAAGCGCCAGGC
CGAAGACTCCAAGCCGAACGACGCAAAGCCGACTGGCAGCAACAGCGAAG
GCCCGAACAAGAAGCGCAAGGGCGGCAAGAACTTCAATGACCGGAAGAAC
AAGGGCAAGGGCAAGGGCAAGAAAGATGAAAAGGGCAAGTCGGATCAGAA
GCCCGCTAAGAAGGAGCCTGCCGATACCAAGGTGACGGAGACCAAGGGCG
GCATCGATGAAGCGATTGGAAAGATGGACGGCCGGCTGTTGGCCGATCAC
TTCGTGCAGAAGGCTAGGCGCCATAACAAGGAGCTGAGTGCGGTTGAGCT
TAGTGATCTGTCTGTGCCGGGTAAGTTGGGTGTCTCTAATACTGGAGATT
GGAGTACTGACGGGAATAGATTCCGCGTTCCTGGATACGTCGTCGTTCGA
TCAGACCCGATCTCTGGAGCAGCTTCCTGCGTTCCTGAAGGCGTTCAGCC
CGAATAAGGGAGCTGACCTTGCGAAGGCATCGGAGGAGAAGGGTACCCCG
CACACTTTGGTTATCTCTGGTGCTGCGCTCAGAGCTGCCGACGTTGTTCG
GTAAGTCCACGGAAGCTGATAGTGAGAAATGATAGGCGGTGCTAACATTT
CCGAAGGGCTCTCCGTTCGTTCCAGACTAAAGAAGCTATTGTCGGAAAGT
TGTTCGCCAAGCACATCAAACTGGAAGAGGCCAAGCAGTTCCTGGAGCGC
GCACGGTACGTATCCCTTGTGTGATTTATGACCATCGCTAATGATCAATA
GCACGGGCATTGGAGCCGGTACCCCTGCTCGTATCTCGGACCTTATTGAA
GCAGGTATGTTGAAGCCGAACTATTGATATCTGAAGCAGGTCTAATCGTT
ACAGGCTCCCTTAAATTGGGTGAACTAGAGCGCATCGTCATTGACGGATC
CTACGTGGATCAGAAGCAACGAGGCATCTTCGACATGAAGGAAACGCACC
TCCCGTTGTTGCAGCTTCTCACACGGCCAGAGTTCCGGGAGCGGTACGGC
GCAGCAGAGAAGAAGATTAAGATCTTGGTCTTTTAGCGGTTGAGTACATC
ATATGGCGTTACGAACGGGCTGGCATCGTTTTATTTGCTCATGTATAAAC
CTGGGAGTTGTTCATAGAAGACAAAAGTGAC back to topCoding sequence (CDS) from alignment at ch2:1527372..1528652- >KJC3_002044-T1 ID=KJC3_002044-T1|Name=KJC3_002044-T1|organism=Aspergillus niger KJC3|type=CDS|length=4515bp|location=Sequence derived from alignment at ch2:1527372..1528652- (Aspergillus niger KJC3)
GCTCCCTTAAATTGGGTGAACTAGAGCGCATCGTCATTGACGGATCCTAC
GTGGATCAGAAGCAACGAGGCATCTTCGACATGAAGGAAACGCACCTCCC
GTTGTTGCAGCTTCTCACACGGCCAGAGTTCCGGGAGCGGTACGGCGCAG
CAGAGAAGAAGATTAAGATCTTGGTCTTTTAGCACGGGCATTGGAGCCGG
TACCCCTGCTCGTATCTCGGACCTTATTGAAGCAGGGCTCTCCGTTCGTT
CCAGACTAAAGAAGCTATTGTCGGAAAGTTGTTCGCCAAGCACATCAAAC
TGGAAGAGGCCAAGCAGTTCCTGGAGCGCGCACGATTCCGCGTTCCTGGA
TACGTCGTCGTTCGATCAGACCCGATCTCTGGAGCAGCTTCCTGCGTTCC
TGAAGGCGTTCAGCCCGAATAAGGGAGCTGACCTTGCGAAGGCATCGGAG
GAGAAGGGTACCCCGCACACTTTGGTTATCTCTGGTGCTGCGCTCAGAGC
TGCCGACGTTGTTCGATGTCTGACGGAACTCCCAAGCCGTCCGGCCTCGC
CGCTAAGGTGGACAAGAAGCGCAAGCGCCAGGCCGAAGACTCCAAGCCGA
ACGACGCAAAGCCGACTGGCAGCAACAGCGAAGGCCCGAACAAGAAGCGC
AAGGGCGGCAAGAACTTCAATGACCGGAAGAACAAGGGCAAGGGCAAGGG
CAAGAAAGATGAAAAGGGCAAGTCGGATCAGAAGCCCGCTAAGAAGGAGC
CTGCCGATACCAAGGTGACGGAGACCAAGGGCGGCATCGATGAAGCGATT
GGAAAGATGGACGGCCGGCTGTTGGCCGATCACTTCGTGCAGAAGGCTAG
GCGCCATAACAAGGAGCTGAGTGCGGTTGAGCTTAGTGATCTGTCTGTGC
CGGGCTCCCTTAAATTGGGTGAACTAGAGCGCATCGTCATTGACGGATCC
TACGTGGATCAGAAGCAACGAGGCATCTTCGACATGAAGGAAACGCACCT
CCCGTTGTTGCAGCTTCTCACACGGCCAGAGTTCCGGGAGCGGTACGGCG
CAGCAGAGAAGAAGATTAAGATCTTGGTCTTTTAGCACGGGCATTGGAGC
CGGTACCCCTGCTCGTATCTCGGACCTTATTGAAGCAGGGCTCTCCGTTC
GTTCCAGACTAAAGAAGCTATTGTCGGAAAGTTGTTCGCCAAGCACATCA
AACTGGAAGAGGCCAAGCAGTTCCTGGAGCGCGCACGATTCCGCGTTCCT
GGATACGTCGTCGTTCGATCAGACCCGATCTCTGGAGCAGCTTCCTGCGT
TCCTGAAGGCGTTCAGCCCGAATAAGGGAGCTGACCTTGCGAAGGCATCG
GAGGAGAAGGGTACCCCGCACACTTTGGTTATCTCTGGTGCTGCGCTCAG
AGCTGCCGACGTTGTTCGATGTCTGACGGAACTCCCAAGCCGTCCGGCCT
CGCCGCTAAGGTGGACAAGAAGCGCAAGCGCCAGGCCGAAGACTCCAAGC
CGAACGACGCAAAGCCGACTGGCAGCAACAGCGAAGGCCCGAACAAGAAG
CGCAAGGGCGGCAAGAACTTCAATGACCGGAAGAACAAGGGCAAGGGCAA
GGGCAAGAAAGATGAAAAGGGCAAGTCGGATCAGAAGCCCGCTAAGAAGG
AGCCTGCCGATACCAAGGTGACGGAGACCAAGGGCGGCATCGATGAAGCG
ATTGGAAAGATGGACGGCCGGCTGTTGGCCGATCACTTCGTGCAGAAGGC
TAGGCGCCATAACAAGGAGCTGAGTGCGGTTGAGCTTAGTGATCTGTCTG
TGCCGGGCTCCCTTAAATTGGGTGAACTAGAGCGCATCGTCATTGACGGA
TCCTACGTGGATCAGAAGCAACGAGGCATCTTCGACATGAAGGAAACGCA
CCTCCCGTTGTTGCAGCTTCTCACACGGCCAGAGTTCCGGGAGCGGTACG
GCGCAGCAGAGAAGAAGATTAAGATCTTGGTCTTTTAGCACGGGCATTGG
AGCCGGTACCCCTGCTCGTATCTCGGACCTTATTGAAGCAGGGCTCTCCG
TTCGTTCCAGACTAAAGAAGCTATTGTCGGAAAGTTGTTCGCCAAGCACA
TCAAACTGGAAGAGGCCAAGCAGTTCCTGGAGCGCGCACGATTCCGCGTT
CCTGGATACGTCGTCGTTCGATCAGACCCGATCTCTGGAGCAGCTTCCTG
CGTTCCTGAAGGCGTTCAGCCCGAATAAGGGAGCTGACCTTGCGAAGGCA
TCGGAGGAGAAGGGTACCCCGCACACTTTGGTTATCTCTGGTGCTGCGCT
CAGAGCTGCCGACGTTGTTCGATGTCTGACGGAACTCCCAAGCCGTCCGG
CCTCGCCGCTAAGGTGGACAAGAAGCGCAAGCGCCAGGCCGAAGACTCCA
AGCCGAACGACGCAAAGCCGACTGGCAGCAACAGCGAAGGCCCGAACAAG
AAGCGCAAGGGCGGCAAGAACTTCAATGACCGGAAGAACAAGGGCAAGGG
CAAGGGCAAGAAAGATGAAAAGGGCAAGTCGGATCAGAAGCCCGCTAAGA
AGGAGCCTGCCGATACCAAGGTGACGGAGACCAAGGGCGGCATCGATGAA
GCGATTGGAAAGATGGACGGCCGGCTGTTGGCCGATCACTTCGTGCAGAA
GGCTAGGCGCCATAACAAGGAGCTGAGTGCGGTTGAGCTTAGTGATCTGT
CTGTGCCGGGCTCCCTTAAATTGGGTGAACTAGAGCGCATCGTCATTGAC
GGATCCTACGTGGATCAGAAGCAACGAGGCATCTTCGACATGAAGGAAAC
GCACCTCCCGTTGTTGCAGCTTCTCACACGGCCAGAGTTCCGGGAGCGGT
ACGGCGCAGCAGAGAAGAAGATTAAGATCTTGGTCTTTTAGCACGGGCAT
TGGAGCCGGTACCCCTGCTCGTATCTCGGACCTTATTGAAGCAGGGCTCT
CCGTTCGTTCCAGACTAAAGAAGCTATTGTCGGAAAGTTGTTCGCCAAGC
ACATCAAACTGGAAGAGGCCAAGCAGTTCCTGGAGCGCGCACGATTCCGC
GTTCCTGGATACGTCGTCGTTCGATCAGACCCGATCTCTGGAGCAGCTTC
CTGCGTTCCTGAAGGCGTTCAGCCCGAATAAGGGAGCTGACCTTGCGAAG
GCATCGGAGGAGAAGGGTACCCCGCACACTTTGGTTATCTCTGGTGCTGC
GCTCAGAGCTGCCGACGTTGTTCGATGTCTGACGGAACTCCCAAGCCGTC
CGGCCTCGCCGCTAAGGTGGACAAGAAGCGCAAGCGCCAGGCCGAAGACT
CCAAGCCGAACGACGCAAAGCCGACTGGCAGCAACAGCGAAGGCCCGAAC
AAGAAGCGCAAGGGCGGCAAGAACTTCAATGACCGGAAGAACAAGGGCAA
GGGCAAGGGCAAGAAAGATGAAAAGGGCAAGTCGGATCAGAAGCCCGCTA
AGAAGGAGCCTGCCGATACCAAGGTGACGGAGACCAAGGGCGGCATCGAT
GAAGCGATTGGAAAGATGGACGGCCGGCTGTTGGCCGATCACTTCGTGCA
GAAGGCTAGGCGCCATAACAAGGAGCTGAGTGCGGTTGAGCTTAGTGATC
TGTCTGTGCCGGGCTCCCTTAAATTGGGTGAACTAGAGCGCATCGTCATT
GACGGATCCTACGTGGATCAGAAGCAACGAGGCATCTTCGACATGAAGGA
AACGCACCTCCCGTTGTTGCAGCTTCTCACACGGCCAGAGTTCCGGGAGC
GGTACGGCGCAGCAGAGAAGAAGATTAAGATCTTGGTCTTTTAGCACGGG
CATTGGAGCCGGTACCCCTGCTCGTATCTCGGACCTTATTGAAGCAGGGC
TCTCCGTTCGTTCCAGACTAAAGAAGCTATTGTCGGAAAGTTGTTCGCCA
AGCACATCAAACTGGAAGAGGCCAAGCAGTTCCTGGAGCGCGCACGATTC
CGCGTTCCTGGATACGTCGTCGTTCGATCAGACCCGATCTCTGGAGCAGC
TTCCTGCGTTCCTGAAGGCGTTCAGCCCGAATAAGGGAGCTGACCTTGCG
AAGGCATCGGAGGAGAAGGGTACCCCGCACACTTTGGTTATCTCTGGTGC
TGCGCTCAGAGCTGCCGACGTTGTTCGATGTCTGACGGAACTCCCAAGCC
GTCCGGCCTCGCCGCTAAGGTGGACAAGAAGCGCAAGCGCCAGGCCGAAG
ACTCCAAGCCGAACGACGCAAAGCCGACTGGCAGCAACAGCGAAGGCCCG
AACAAGAAGCGCAAGGGCGGCAAGAACTTCAATGACCGGAAGAACAAGGG
CAAGGGCAAGGGCAAGAAAGATGAAAAGGGCAAGTCGGATCAGAAGCCCG
CTAAGAAGGAGCCTGCCGATACCAAGGTGACGGAGACCAAGGGCGGCATC
GATGAAGCGATTGGAAAGATGGACGGCCGGCTGTTGGCCGATCACTTCGT
GCAGAAGGCTAGGCGCCATAACAAGGAGCTGAGTGCGGTTGAGCTTAGTG
ATCTGTCTGTGCCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002044-T1.utr3p1 | KJC3_002044-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002044-T1.utr5p1 | KJC3_002044-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264KTU |
| DBxref | InterPro:IPR032704 |
| DBxref | PFAM:PF14617 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1527372..1528652 - |
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