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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1531973..1533806+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002047-T1 ID=KJC3_002047-T1|Name=KJC3_002047-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1834bp|location=Sequence derived from alignment at ch2:1531973..1533806+ (Aspergillus niger KJC3)
TTGTCATTTGTCTACTTCACTTACGCAGAACGCGAGACGCAATATGTTCT
ACTCCGGGAGCTTACAGGAGGGTATTGCTGCAGCGGTTGCTGAGAGCAAG
GCTGTTGTTTGCTTTGTTAGAGGTTCGTTTATCTACGGCCATTGGAAATG
GAGGGATGCTGGAGCTCGGCGATACTCCGCAGTACTGACACAGCTACTTA
GATGCCGAGCAGGCGAGTACGGAATGGGAGGAGAGCTACTTTACGTTTGA
TGAGGAGGTCTGCAGCACATTCGATACACATATTTCTGCATCTGCTAACG
CTACGCAGTTAGCGCAACTGCTCCAATCGAGAGCTGTCCTCTTGCGCTTC
ACCAAAGGTAGTCAGGAAGCGGGCTTTCTGGCCTCCTTTTGTCCCATCGT
CAAGTTTCCCACCGTCGTCGTGATAAAGTATGTGCAATAGTACCTGGGTT
CTGGGCGTTGCTGATCGTCGCAGGAATGGTATGATGTGCGATTACTTCGT
GCCGGACATTTCCAAAGAGGACTTTCGCGATCGCCTACTTGCGAAGCTGG
ATGAGAGTCGCGCGCCGGTTCAGCAGGATGTAGGGAGTGCAGGTACTGCT
GGGGACGAGACGGTGTCTGCTCCTGTGGCTTCTGATGCTCCTGCGCCGGC
ACCTGTGTCTTCTGTGCCTGTACCGGCACCAGCGCCTGTCGCAGAGCCAG
CTCCTACACCAGCTCCAGCTCAGCCTGCACCCCAGCCCTCCACAACCGAG
CCAGAGCAACCCCGCGATGCGACTATCCGCGAAGGAAAGAGACGAGTAGA
TGATGCGCGAGTCGAGCAACACCGTCCGTCCCCGACGAAGAAACTCCAAC
AACAGAAGCAAGAGCCAGCACCTAAGCCAACTCCCCGACCAGCCACACAA
GAGAGCAAGCCTAAGCCCAAGCCCACCCCCAAAGAGAAGCCATCTGCCCC
TGCCGCGCCCAAGGAACCCACCACCGAACCCGCTGAGCGGCGCCAGCCCT
CCCCTCCGAAGCAATACCGTCTCCAAGTACGTCTCTTCGACGGCAGCTCC
GTGCGCTCCAGCTTCACTCCCACCCAGACCATCCGCAACGACGTCCGTCC
CTGGCTTGACAGTCAAATGGAAGAGCGGAGCCCCTACAACCTCAAACATA
TTCTGACGCCTCTCCCGAATCGCACCCTCACCATCGCCGACGAGGAGCAA
ACCCTAGCTGAGCTGGGACTCGGCAGCTCCGCCAACCTGGTTATGGTCCC
GATCCAGTCCTATACAGAGGCATATTCCGGCGCGGGTGCGAGCTTGCCGG
TCCGAGCGGTGTCGTCTGCCTACGGACTGGTGTCGTCGGCGGTTGGTACT
GCGACAGGGCTTGTGGGATCATTCTTTGGGTATGGGACGACGCAGTCATC
GGGTAATGAGGCTGCGCCGGCTCCTGGCACGGCTTCTTCGGGGTCGAACG
ATGCGGGACGCAGGCGGGTGAATGCGTCCAGAGGACCGATTATTCGGACG
TTGAGGGATGCGCAGAATGAGGGGGATGATCGGCAGTTCTATAATGGGAA
TCAGGTGAGTACTCTACTGTTGACGATAATTAATGATATACTGATGCAGT
TGTTATCTAGTTGAACTTCCAGCCTCGAAATGATGGAGACAGACGATGAG
CCGTAATGTAGTGCGAATATACTTGGGTTCTTTAGTGCTATGTATGTATC
AAACTCCCACTTCCTCTGCTTGTAGCGAAGCATGTATGTACCTCTATGAG
AATGATGTCAAGCCTGCCTTATCATCTGTCATCTACTAGTCTACCATAAG
CAATAAAACAGAAGCACATGAAGAGTGGAATGAT back to topCoding sequence (CDS) from alignment at ch2:1531973..1533806+ >KJC3_002047-T1 ID=KJC3_002047-T1|Name=KJC3_002047-T1|organism=Aspergillus niger KJC3|type=CDS|length=6870bp|location=Sequence derived from alignment at ch2:1531973..1533806+ (Aspergillus niger KJC3)
ATGTTCTACTCCGGGAGCTTACAGGAGGGTATTGCTGCAGCGGTTGCTGA
GAGCAAGGCTGTTGTTTGCTTTGTTAGAGATGCCGAGCAGGCGAGTACGG
AATGGGAGGAGAGCTACTTTACGTTTGATGAGGAGTTAGCGCAACTGCTC
CAATCGAGAGCTGTCCTCTTGCGCTTCACCAAAGGTAGTCAGGAAGCGGG
CTTTCTGGCCTCCTTTTGTCCCATCGTCAAGTTTCCCACCGTCGTCGTGA
TAAAGAATGGTATGATGTGCGATTACTTCGTGCCGGACATTTCCAAAGAG
GACTTTCGCGATCGCCTACTTGCGAAGCTGGATGAGAGTCGCGCGCCGGT
TCAGCAGGATGTAGGGAGTGCAGGTACTGCTGGGGACGAGACGGTGTCTG
CTCCTGTGGCTTCTGATGCTCCTGCGCCGGCACCTGTGTCTTCTGTGCCT
GTACCGGCACCAGCGCCTGTCGCAGAGCCAGCTCCTACACCAGCTCCAGC
TCAGCCTGCACCCCAGCCCTCCACAACCGAGCCAGAGCAACCCCGCGATG
CGACTATCCGCGAAGGAAAGAGACGAGTAGATGATGCGCGAGTCGAGCAA
CACCGTCCGTCCCCGACGAAGAAACTCCAACAACAGAAGCAAGAGCCAGC
ACCTAAGCCAACTCCCCGACCAGCCACACAAGAGAGCAAGCCTAAGCCCA
AGCCCACCCCCAAAGAGAAGCCATCTGCCCCTGCCGCGCCCAAGGAACCC
ACCACCGAACCCGCTGAGCGGCGCCAGCCCTCCCCTCCGAAGCAATACCG
TCTCCAAGTACGTCTCTTCGACGGCAGCTCCGTGCGCTCCAGCTTCACTC
CCACCCAGACCATCCGCAACGACGTCCGTCCCTGGCTTGACAGTCAAATG
GAAGAGCGGAGCCCCTACAACCTCAAACATATTCTGACGCCTCTCCCGAA
TCGCACCCTCACCATCGCCGACGAGGAGCAAACCCTAGCTGAGCTGGGAC
TCGGCAGCTCCGCCAACCTGGTTATGGTCCCGATCCAGTCCTATACAGAG
GCATATTCCGGCGCGGGTGCGAGCTTGCCGGTCCGAGCGGTGTCGTCTGC
CTACGGACTGGTGTCGTCGGCGGTTGGTACTGCGACAGGGCTTGTGGGAT
CATTCTTTGGGTATGGGACGACGCAGTCATCGGGTAATGAGGCTGCGCCG
GCTCCTGGCACGGCTTCTTCGGGGTCGAACGATGCGGGACGCAGGCGGGT
GAATGCGTCCAGAGGACCGATTATTCGGACGTTGAGGGATGCGCAGAATG
AGGGGGATGATCGGCAGTTCTATAATGGGAATCAGTTGAACTTCCAGCCT
CGAAATGATGGAGACAGACGATGAATGTTCTACTCCGGGAGCTTACAGGA
GGGTATTGCTGCAGCGGTTGCTGAGAGCAAGGCTGTTGTTTGCTTTGTTA
GAGATGCCGAGCAGGCGAGTACGGAATGGGAGGAGAGCTACTTTACGTTT
GATGAGGAGTTAGCGCAACTGCTCCAATCGAGAGCTGTCCTCTTGCGCTT
CACCAAAGGTAGTCAGGAAGCGGGCTTTCTGGCCTCCTTTTGTCCCATCG
TCAAGTTTCCCACCGTCGTCGTGATAAAGAATGGTATGATGTGCGATTAC
TTCGTGCCGGACATTTCCAAAGAGGACTTTCGCGATCGCCTACTTGCGAA
GCTGGATGAGAGTCGCGCGCCGGTTCAGCAGGATGTAGGGAGTGCAGGTA
CTGCTGGGGACGAGACGGTGTCTGCTCCTGTGGCTTCTGATGCTCCTGCG
CCGGCACCTGTGTCTTCTGTGCCTGTACCGGCACCAGCGCCTGTCGCAGA
GCCAGCTCCTACACCAGCTCCAGCTCAGCCTGCACCCCAGCCCTCCACAA
CCGAGCCAGAGCAACCCCGCGATGCGACTATCCGCGAAGGAAAGAGACGA
GTAGATGATGCGCGAGTCGAGCAACACCGTCCGTCCCCGACGAAGAAACT
CCAACAACAGAAGCAAGAGCCAGCACCTAAGCCAACTCCCCGACCAGCCA
CACAAGAGAGCAAGCCTAAGCCCAAGCCCACCCCCAAAGAGAAGCCATCT
GCCCCTGCCGCGCCCAAGGAACCCACCACCGAACCCGCTGAGCGGCGCCA
GCCCTCCCCTCCGAAGCAATACCGTCTCCAAGTACGTCTCTTCGACGGCA
GCTCCGTGCGCTCCAGCTTCACTCCCACCCAGACCATCCGCAACGACGTC
CGTCCCTGGCTTGACAGTCAAATGGAAGAGCGGAGCCCCTACAACCTCAA
ACATATTCTGACGCCTCTCCCGAATCGCACCCTCACCATCGCCGACGAGG
AGCAAACCCTAGCTGAGCTGGGACTCGGCAGCTCCGCCAACCTGGTTATG
GTCCCGATCCAGTCCTATACAGAGGCATATTCCGGCGCGGGTGCGAGCTT
GCCGGTCCGAGCGGTGTCGTCTGCCTACGGACTGGTGTCGTCGGCGGTTG
GTACTGCGACAGGGCTTGTGGGATCATTCTTTGGGTATGGGACGACGCAG
TCATCGGGTAATGAGGCTGCGCCGGCTCCTGGCACGGCTTCTTCGGGGTC
GAACGATGCGGGACGCAGGCGGGTGAATGCGTCCAGAGGACCGATTATTC
GGACGTTGAGGGATGCGCAGAATGAGGGGGATGATCGGCAGTTCTATAAT
GGGAATCAGTTGAACTTCCAGCCTCGAAATGATGGAGACAGACGATGAAT
GTTCTACTCCGGGAGCTTACAGGAGGGTATTGCTGCAGCGGTTGCTGAGA
GCAAGGCTGTTGTTTGCTTTGTTAGAGATGCCGAGCAGGCGAGTACGGAA
TGGGAGGAGAGCTACTTTACGTTTGATGAGGAGTTAGCGCAACTGCTCCA
ATCGAGAGCTGTCCTCTTGCGCTTCACCAAAGGTAGTCAGGAAGCGGGCT
TTCTGGCCTCCTTTTGTCCCATCGTCAAGTTTCCCACCGTCGTCGTGATA
AAGAATGGTATGATGTGCGATTACTTCGTGCCGGACATTTCCAAAGAGGA
CTTTCGCGATCGCCTACTTGCGAAGCTGGATGAGAGTCGCGCGCCGGTTC
AGCAGGATGTAGGGAGTGCAGGTACTGCTGGGGACGAGACGGTGTCTGCT
CCTGTGGCTTCTGATGCTCCTGCGCCGGCACCTGTGTCTTCTGTGCCTGT
ACCGGCACCAGCGCCTGTCGCAGAGCCAGCTCCTACACCAGCTCCAGCTC
AGCCTGCACCCCAGCCCTCCACAACCGAGCCAGAGCAACCCCGCGATGCG
ACTATCCGCGAAGGAAAGAGACGAGTAGATGATGCGCGAGTCGAGCAACA
CCGTCCGTCCCCGACGAAGAAACTCCAACAACAGAAGCAAGAGCCAGCAC
CTAAGCCAACTCCCCGACCAGCCACACAAGAGAGCAAGCCTAAGCCCAAG
CCCACCCCCAAAGAGAAGCCATCTGCCCCTGCCGCGCCCAAGGAACCCAC
CACCGAACCCGCTGAGCGGCGCCAGCCCTCCCCTCCGAAGCAATACCGTC
TCCAAGTACGTCTCTTCGACGGCAGCTCCGTGCGCTCCAGCTTCACTCCC
ACCCAGACCATCCGCAACGACGTCCGTCCCTGGCTTGACAGTCAAATGGA
AGAGCGGAGCCCCTACAACCTCAAACATATTCTGACGCCTCTCCCGAATC
GCACCCTCACCATCGCCGACGAGGAGCAAACCCTAGCTGAGCTGGGACTC
GGCAGCTCCGCCAACCTGGTTATGGTCCCGATCCAGTCCTATACAGAGGC
ATATTCCGGCGCGGGTGCGAGCTTGCCGGTCCGAGCGGTGTCGTCTGCCT
ACGGACTGGTGTCGTCGGCGGTTGGTACTGCGACAGGGCTTGTGGGATCA
TTCTTTGGGTATGGGACGACGCAGTCATCGGGTAATGAGGCTGCGCCGGC
TCCTGGCACGGCTTCTTCGGGGTCGAACGATGCGGGACGCAGGCGGGTGA
ATGCGTCCAGAGGACCGATTATTCGGACGTTGAGGGATGCGCAGAATGAG
GGGGATGATCGGCAGTTCTATAATGGGAATCAGTTGAACTTCCAGCCTCG
AAATGATGGAGACAGACGATGAATGTTCTACTCCGGGAGCTTACAGGAGG
GTATTGCTGCAGCGGTTGCTGAGAGCAAGGCTGTTGTTTGCTTTGTTAGA
GATGCCGAGCAGGCGAGTACGGAATGGGAGGAGAGCTACTTTACGTTTGA
TGAGGAGTTAGCGCAACTGCTCCAATCGAGAGCTGTCCTCTTGCGCTTCA
CCAAAGGTAGTCAGGAAGCGGGCTTTCTGGCCTCCTTTTGTCCCATCGTC
AAGTTTCCCACCGTCGTCGTGATAAAGAATGGTATGATGTGCGATTACTT
CGTGCCGGACATTTCCAAAGAGGACTTTCGCGATCGCCTACTTGCGAAGC
TGGATGAGAGTCGCGCGCCGGTTCAGCAGGATGTAGGGAGTGCAGGTACT
GCTGGGGACGAGACGGTGTCTGCTCCTGTGGCTTCTGATGCTCCTGCGCC
GGCACCTGTGTCTTCTGTGCCTGTACCGGCACCAGCGCCTGTCGCAGAGC
CAGCTCCTACACCAGCTCCAGCTCAGCCTGCACCCCAGCCCTCCACAACC
GAGCCAGAGCAACCCCGCGATGCGACTATCCGCGAAGGAAAGAGACGAGT
AGATGATGCGCGAGTCGAGCAACACCGTCCGTCCCCGACGAAGAAACTCC
AACAACAGAAGCAAGAGCCAGCACCTAAGCCAACTCCCCGACCAGCCACA
CAAGAGAGCAAGCCTAAGCCCAAGCCCACCCCCAAAGAGAAGCCATCTGC
CCCTGCCGCGCCCAAGGAACCCACCACCGAACCCGCTGAGCGGCGCCAGC
CCTCCCCTCCGAAGCAATACCGTCTCCAAGTACGTCTCTTCGACGGCAGC
TCCGTGCGCTCCAGCTTCACTCCCACCCAGACCATCCGCAACGACGTCCG
TCCCTGGCTTGACAGTCAAATGGAAGAGCGGAGCCCCTACAACCTCAAAC
ATATTCTGACGCCTCTCCCGAATCGCACCCTCACCATCGCCGACGAGGAG
CAAACCCTAGCTGAGCTGGGACTCGGCAGCTCCGCCAACCTGGTTATGGT
CCCGATCCAGTCCTATACAGAGGCATATTCCGGCGCGGGTGCGAGCTTGC
CGGTCCGAGCGGTGTCGTCTGCCTACGGACTGGTGTCGTCGGCGGTTGGT
ACTGCGACAGGGCTTGTGGGATCATTCTTTGGGTATGGGACGACGCAGTC
ATCGGGTAATGAGGCTGCGCCGGCTCCTGGCACGGCTTCTTCGGGGTCGA
ACGATGCGGGACGCAGGCGGGTGAATGCGTCCAGAGGACCGATTATTCGG
ACGTTGAGGGATGCGCAGAATGAGGGGGATGATCGGCAGTTCTATAATGG
GAATCAGTTGAACTTCCAGCCTCGAAATGATGGAGACAGACGATGAATGT
TCTACTCCGGGAGCTTACAGGAGGGTATTGCTGCAGCGGTTGCTGAGAGC
AAGGCTGTTGTTTGCTTTGTTAGAGATGCCGAGCAGGCGAGTACGGAATG
GGAGGAGAGCTACTTTACGTTTGATGAGGAGTTAGCGCAACTGCTCCAAT
CGAGAGCTGTCCTCTTGCGCTTCACCAAAGGTAGTCAGGAAGCGGGCTTT
CTGGCCTCCTTTTGTCCCATCGTCAAGTTTCCCACCGTCGTCGTGATAAA
GAATGGTATGATGTGCGATTACTTCGTGCCGGACATTTCCAAAGAGGACT
TTCGCGATCGCCTACTTGCGAAGCTGGATGAGAGTCGCGCGCCGGTTCAG
CAGGATGTAGGGAGTGCAGGTACTGCTGGGGACGAGACGGTGTCTGCTCC
TGTGGCTTCTGATGCTCCTGCGCCGGCACCTGTGTCTTCTGTGCCTGTAC
CGGCACCAGCGCCTGTCGCAGAGCCAGCTCCTACACCAGCTCCAGCTCAG
CCTGCACCCCAGCCCTCCACAACCGAGCCAGAGCAACCCCGCGATGCGAC
TATCCGCGAAGGAAAGAGACGAGTAGATGATGCGCGAGTCGAGCAACACC
GTCCGTCCCCGACGAAGAAACTCCAACAACAGAAGCAAGAGCCAGCACCT
AAGCCAACTCCCCGACCAGCCACACAAGAGAGCAAGCCTAAGCCCAAGCC
CACCCCCAAAGAGAAGCCATCTGCCCCTGCCGCGCCCAAGGAACCCACCA
CCGAACCCGCTGAGCGGCGCCAGCCCTCCCCTCCGAAGCAATACCGTCTC
CAAGTACGTCTCTTCGACGGCAGCTCCGTGCGCTCCAGCTTCACTCCCAC
CCAGACCATCCGCAACGACGTCCGTCCCTGGCTTGACAGTCAAATGGAAG
AGCGGAGCCCCTACAACCTCAAACATATTCTGACGCCTCTCCCGAATCGC
ACCCTCACCATCGCCGACGAGGAGCAAACCCTAGCTGAGCTGGGACTCGG
CAGCTCCGCCAACCTGGTTATGGTCCCGATCCAGTCCTATACAGAGGCAT
ATTCCGGCGCGGGTGCGAGCTTGCCGGTCCGAGCGGTGTCGTCTGCCTAC
GGACTGGTGTCGTCGGCGGTTGGTACTGCGACAGGGCTTGTGGGATCATT
CTTTGGGTATGGGACGACGCAGTCATCGGGTAATGAGGCTGCGCCGGCTC
CTGGCACGGCTTCTTCGGGGTCGAACGATGCGGGACGCAGGCGGGTGAAT
GCGTCCAGAGGACCGATTATTCGGACGTTGAGGGATGCGCAGAATGAGGG
GGATGATCGGCAGTTCTATAATGGGAATCAGTTGAACTTCCAGCCTCGAA
ATGATGGAGACAGACGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002047-T1.utr5p1 | KJC3_002047-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002047-T1.utr3p1 | KJC3_002047-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR001012 |
| DBxref | PFAM:PF00789 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1531973..1533806 + |
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