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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1540072..1541026+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002052-T1 ID=KJC3_002052-T1|Name=KJC3_002052-T1|organism=Aspergillus niger KJC3|type=mRNA|length=955bp|location=Sequence derived from alignment at ch2:1540072..1541026+ (Aspergillus niger KJC3)
TTACCCTTCACTCGACACACGATGACGGTCCTCCGGACGCGCAGTGCCGT
CCAGCACGCGCGCGAACTAAACAATTTCCTCTCCTGCGCAGCACCGCTAT
CGCTCCGCTCCCACTCACGGCCGATCTCCGGCTTCAACCGTCCTCCGCCC
AACTATCCCGGCCATGTGCCATTGAACTTTGTAGAGCGCGGTGCTCTGGC
CGTGGGGTCAGCCGTGGGGGCTCTTCTCAATCCCCGAAGAGCTGGTACAT
TTACTTCCCTCAGGTTCAGGTTATAACGTTGTAACTAATATATCGCTAAA
AACAGACCTAATCGCCGCCTGCGGCGAAGCCACCGCAACACCCTACTTCA
TCTACCGGCTCCGTGACGCCATGCTCTCAGACCCAACAGGCCGACAAATT
CTCCGCGACCGACCGCGCATCACCTCCGAGACCCTCAAACTACCGTACCT
CCGCTCCCTCCCTGAGAACACTGTCGGCCGGACGTACGCTACCTGGCTGG
ACCGCGAAGGCGTGTCCCCAGACACCCGGGACAATGTGCAGTACATTGAT
GACGAGGAATGCGCGTATGTCATGCAGCGGTACCGGGAGTGTCATGACTT
CTACCATGCTGTGACGGGACTGCCGATTTTTGTGGAGGGAGAGCTGGCGC
TCAAAGCGTTTGAATTTCTGAATACGTTGATTCCTATGACTGGTTTGAGT
CTATTTGCATCGGTGAGGTTGAAGCCGGCGGAGCGGGAACGGTTGTTTTC
GATTTACCTGCCGTGGGCGTTGAGGAGTGGATTGCGGAGTAAGGAGTTGA
TTAATGTTTACTGGGAGAAGGTGTTGGAGAAGGATGTCGGGGAGTTAAGA
GAGGAGCTGGGCATTGAGAGGCCGCCGGATATGAGGGAGATTAGGCGGAT
GATTCGGATGCAGAAGAAGAGGGAGAAGGAGTTGATGGAGCAGAGGGGGC
AGTGA back to topCoding sequence (CDS) from alignment at ch2:1540072..1541026+ >KJC3_002052-T1 ID=KJC3_002052-T1|Name=KJC3_002052-T1|organism=Aspergillus niger KJC3|type=CDS|length=1746bp|location=Sequence derived from alignment at ch2:1540072..1541026+ (Aspergillus niger KJC3)
ATGACGGTCCTCCGGACGCGCAGTGCCGTCCAGCACGCGCGCGAACTAAA
CAATTTCCTCTCCTGCGCAGCACCGCTATCGCTCCGCTCCCACTCACGGC
CGATCTCCGGCTTCAACCGTCCTCCGCCCAACTATCCCGGCCATGTGCCA
TTGAACTTTGTAGAGCGCGGTGCTCTGGCCGTGGGGTCAGCCGTGGGGGC
TCTTCTCAATCCCCGAAGAGCTGACCTAATCGCCGCCTGCGGCGAAGCCA
CCGCAACACCCTACTTCATCTACCGGCTCCGTGACGCCATGCTCTCAGAC
CCAACAGGCCGACAAATTCTCCGCGACCGACCGCGCATCACCTCCGAGAC
CCTCAAACTACCGTACCTCCGCTCCCTCCCTGAGAACACTGTCGGCCGGA
CGTACGCTACCTGGCTGGACCGCGAAGGCGTGTCCCCAGACACCCGGGAC
AATGTGCAGTACATTGATGACGAGGAATGCGCGTATGTCATGCAGCGGTA
CCGGGAGTGTCATGACTTCTACCATGCTGTGACGGGACTGCCGATTTTTG
TGGAGGGAGAGCTGGCGCTCAAAGCGTTTGAATTTCTGAATACGTTGATT
CCTATGACTGGTTTGAGTCTATTTGCATCGGTGAGGTTGAAGCCGGCGGA
GCGGGAACGGTTGTTTTCGATTTACCTGCCGTGGGCGTTGAGGAGTGGAT
TGCGGAGTAAGGAGTTGATTAATGTTTACTGGGAGAAGGTGTTGGAGAAG
GATGTCGGGGAGTTAAGAGAGGAGCTGGGCATTGAGAGGCCGCCGGATAT
GAGGGAGATTAGGCGGATGATTCGGATGCAGAAGAAGAGGGAGAAGGAGT
TGATGGAGCAGAGGGGGCAGTGAATGACGGTCCTCCGGACGCGCAGTGCC
GTCCAGCACGCGCGCGAACTAAACAATTTCCTCTCCTGCGCAGCACCGCT
ATCGCTCCGCTCCCACTCACGGCCGATCTCCGGCTTCAACCGTCCTCCGC
CCAACTATCCCGGCCATGTGCCATTGAACTTTGTAGAGCGCGGTGCTCTG
GCCGTGGGGTCAGCCGTGGGGGCTCTTCTCAATCCCCGAAGAGCTGACCT
AATCGCCGCCTGCGGCGAAGCCACCGCAACACCCTACTTCATCTACCGGC
TCCGTGACGCCATGCTCTCAGACCCAACAGGCCGACAAATTCTCCGCGAC
CGACCGCGCATCACCTCCGAGACCCTCAAACTACCGTACCTCCGCTCCCT
CCCTGAGAACACTGTCGGCCGGACGTACGCTACCTGGCTGGACCGCGAAG
GCGTGTCCCCAGACACCCGGGACAATGTGCAGTACATTGATGACGAGGAA
TGCGCGTATGTCATGCAGCGGTACCGGGAGTGTCATGACTTCTACCATGC
TGTGACGGGACTGCCGATTTTTGTGGAGGGAGAGCTGGCGCTCAAAGCGT
TTGAATTTCTGAATACGTTGATTCCTATGACTGGTTTGAGTCTATTTGCA
TCGGTGAGGTTGAAGCCGGCGGAGCGGGAACGGTTGTTTTCGATTTACCT
GCCGTGGGCGTTGAGGAGTGGATTGCGGAGTAAGGAGTTGATTAATGTTT
ACTGGGAGAAGGTGTTGGAGAAGGATGTCGGGGAGTTAAGAGAGGAGCTG
GGCATTGAGAGGCCGCCGGATATGAGGGAGATTAGGCGGATGATTCGGAT
GCAGAAGAAGAGGGAGAAGGAGTTGATGGAGCAGAGGGGGCAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005743 | mitochondrial inner membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006744 | ubiquinone biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002052-T1.utr5p1 | KJC3_002052-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092643VB |
| DBxref | InterPro:IPR027540 |
| DBxref | InterPro:IPR007715 |
| DBxref | PFAM:PF05019 |
| Product | Ubiquinone biosynthesis protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1540072..1541026 + |
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