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KJC3_002055-T1, KJC3_002055-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002055-T1
Unique NameKJC3_002055-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1546999..1549036-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002055-T1 ID=KJC3_002055-T1|Name=KJC3_002055-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2038bp|location=Sequence derived from alignment at ch2:1546999..1549036- (Aspergillus niger KJC3)
TCAGTCTGGACTCTCTCATCCAATCCCCGCGTCCTCTCCATTTTCATCGG
AGTGAGCACCATGGCATCTGCAAGTAACGGAGGTACTCCGCTGCCGGAAG
AGGTGAGCAAGCCTCCTGAGGGCGTGGTCTTGCCACCCAAGGATATTCGA
GGTAAGTTTGTCTATGCCTCCAAGGCCTGTGATGGCCGAAAGCTGACATT
GAAACAGCTATCGTCGAGAAAACGGCTGGCTATGTCGCTCGAAACGGTGT
CGTCTTCGAAGGTACGTCACATCCTCGACATGCTAATTTACTATTCGAAC
CGCGCAGCTCACGCGCAGACTCTTAGATCGCGTTCGTGAAAAGGAACGGA
ACAACCCCAAATTCTCCTTCCTCAACCCCGGTGACGCCTACGCTCCCTTC
TACCAATGGCGTCTCGTCGAGATCAAGGAAGGACGAGGAACCGCAGTGGC
AGCAGGCCGACCAGGAGAAGCGACCCCCGCAGCTGAACCAGAGAAGCCCA
AGGGCCCCGAAGAACCCCCGGAGTTTCACTTTTCTGCACGGATGCCCATA
ATCAATGCGCAAGATCTGGAAGTTGTGAAGCTTACAGCTCTCTTCGTCGC
CAAGCGTGGAAAATCATTCATGACTGCGCTCTCCCAAAGAGAAACCAGAA
ACTTCCAGTTCGACTTCCTGCGCCCGCAACACAGTCTCTACCAGTTCTTC
ACCCGACTCGTCGACCAATACACCATCCTCCTCCGCTCCGAAGGCATCGA
CGCCGCCACAACAGAGAAGAAGCGTCTCGCCGACCTTGAGCGCAACGTTC
AGAACAAATTCCACGTTCTCGACCGCGCCAAGCAACGCGCCGAATGGTTG
AAATACCAAGAACAGCAGAAGCAAAAGAAGGAGGAAGAAGAGGAACAAGA
GCGTATCGCATACGCCCAGATTGACTGGCATGATTTCGTCGTCGTCGAAA
CCGTCCTCTTCACCGAAGCAGACGACCAAGTCGACCTCCCTCCCCCAACC
TCTCTCAACGACCTCCAATCCGCCTCCCTCGAACAAAAAGCCATGATGTC
TCTCAACCCTCTCCGCATCGAAGAAGCCATGCCCACCGAAGAGGAAACTC
CCACCTACTACAACGCCTATCCCCAACAACAACCCGAACCCATCATCCCC
GCCGGCCCCGCCTACCCCCCTCAAGGCCTGCCCCCTCAACAACCCATCGT
TCCTCCACCTATGTCCACCGCCGCCCAAGAAGAAGAGCAATACATCCGGG
AACGCATGGAAGCGCGCGAGCAAGCCGCCGCCGCCAAAGCCGCCGCTGTC
CAACAACCCCAACAACAACAACAACCGATGCGCATCCGCTCCGACTACGT
CCCCCGAGCCCAAGCCCGTCGCCAAAACCCCACAGGCGCCACGGCGCTCT
GCCCCAACTGCCACCAACAGATTCCTGTCGGCGAACTGGAACAACACATG
CGCATCGAGCTGCTCGATCCGCGCTGGAAGGAACAACGCGCCAAGGCCGA
ATCCCGCAGCGCAACCACCAACCTGTTTACTGTGGACGTGGTCAACAACC
TCAAGCGTCTGGCCAGTCAACGAAGCGACGTGTTCGATTCCGCTGCCATG
CCTGGGTCTGGGGCTGTAGATCCCGAGGAAGAGGCCCGGCGCAAGAAGAT
GGCTGTCGAAGGAGCCGTGCCTGGTTCGGGGCCTGTGCCGCCGCCGGTAG
TCGGACCTGCCGGCGCGCCTCCTAATCCTCAGAGTATGAATATTGAAGAG
CAGATTAGGCGCATTCATGAACGGCAGGCTATGACGAGGAAATAGATATT
ACGTTCTTCCCGTTTTAACTCTTTCATGATGTGTCTATTTGGGCCTTTCC
TTTTTTTTTTTTTTTTTGTTACACTCTTACCTGGCATACTGGGAATTAGG
ATCTTTCATTATATTGTTCACTCAGGCGTTTTTGCAGTTGATGAAGGAGT
ATGTATACGTGGTTGATAGGTCTTCTTTGAGGCAAGACGTATGTCGTCTA
CACTTCAGTTGTAAAATCTTGATCACATTTCATGTTTG
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Coding sequence (CDS) from alignment at ch2:1546999..1549036-

>KJC3_002055-T1 ID=KJC3_002055-T1|Name=KJC3_002055-T1|organism=Aspergillus niger KJC3|type=CDS|length=4842bp|location=Sequence derived from alignment at ch2:1546999..1549036- (Aspergillus niger KJC3)
ATCGCGTTCGTGAAAAGGAACGGAACAACCCCAAATTCTCCTTCCTCAAC
CCCGGTGACGCCTACGCTCCCTTCTACCAATGGCGTCTCGTCGAGATCAA
GGAAGGACGAGGAACCGCAGTGGCAGCAGGCCGACCAGGAGAAGCGACCC
CCGCAGCTGAACCAGAGAAGCCCAAGGGCCCCGAAGAACCCCCGGAGTTT
CACTTTTCTGCACGGATGCCCATAATCAATGCGCAAGATCTGGAAGTTGT
GAAGCTTACAGCTCTCTTCGTCGCCAAGCGTGGAAAATCATTCATGACTG
CGCTCTCCCAAAGAGAAACCAGAAACTTCCAGTTCGACTTCCTGCGCCCG
CAACACAGTCTCTACCAGTTCTTCACCCGACTCGTCGACCAATACACCAT
CCTCCTCCGCTCCGAAGGCATCGACGCCGCCACAACAGAGAAGAAGCGTC
TCGCCGACCTTGAGCGCAACGTTCAGAACAAATTCCACGTTCTCGACCGC
GCCAAGCAACGCGCCGAATGGTTGAAATACCAAGAACAGCAGAAGCAAAA
GAAGGAGGAAGAAGAGGAACAAGAGCGTATCGCATACGCCCAGATTGACT
GGCATGATTTCGTCGTCGTCGAAACCGTCCTCTTCACCGAAGCAGACGAC
CAAGTCGACCTCCCTCCCCCAACCTCTCTCAACGACCTCCAATCCGCCTC
CCTCGAACAAAAAGCCATGATGTCTCTCAACCCTCTCCGCATCGAAGAAG
CCATGCCCACCGAAGAGGAAACTCCCACCTACTACAACGCCTATCCCCAA
CAACAACCCGAACCCATCATCCCCGCCGGCCCCGCCTACCCCCCTCAAGG
CCTGCCCCCTCAACAACCCATCGTTCCTCCACCTATGTCCACCGCCGCCC
AAGAAGAAGAGCAATACATCCGGGAACGCATGGAAGCGCGCGAGCAAGCC
GCCGCCGCCAAAGCCGCCGCTGTCCAACAACCCCAACAACAACAACAACC
GATGCGCATCCGCTCCGACTACGTCCCCCGAGCCCAAGCCCGTCGCCAAA
ACCCCACAGGCGCCACGGCGCTCTGCCCCAACTGCCACCAACAGATTCCT
GTCGGCGAACTGGAACAACACATGCGCATCGAGCTGCTCGATCCGCGCTG
GAAGGAACAACGCGCCAAGGCCGAATCCCGCAGCGCAACCACCAACCTGT
TTACTGTGGACGTGGTCAACAACCTCAAGCGTCTGGCCAGTCAACGAAGC
GACGTGTTCGATTCCGCTGCCATGCCTGGGTCTGGGGCTGTAGATCCCGA
GGAAGAGGCCCGGCGCAAGAAGATGGCTGTCGAAGGAGCCGTGCCTGGTT
CGGGGCCTGTGCCGCCGCCGGTAGTCGGACCTGCCGGCGCGCCTCCTAAT
CCTCAGAGTATGAATATTGAAGAGCAGATTAGGCGCATTCATGAACGGCA
GGCTATGACGAGGAAATAGCTATCGTCGAGAAAACGGCTGGCTATGTCGC
TCGAAACGGTGTCGTCTTCGAAGATGGCATCTGCAAGTAACGGAGGTACT
CCGCTGCCGGAAGAGGTGAGCAAGCCTCCTGAGGGCGTGGTCTTGCCACC
CAAGGATATTCGAGATCGCGTTCGTGAAAAGGAACGGAACAACCCCAAAT
TCTCCTTCCTCAACCCCGGTGACGCCTACGCTCCCTTCTACCAATGGCGT
CTCGTCGAGATCAAGGAAGGACGAGGAACCGCAGTGGCAGCAGGCCGACC
AGGAGAAGCGACCCCCGCAGCTGAACCAGAGAAGCCCAAGGGCCCCGAAG
AACCCCCGGAGTTTCACTTTTCTGCACGGATGCCCATAATCAATGCGCAA
GATCTGGAAGTTGTGAAGCTTACAGCTCTCTTCGTCGCCAAGCGTGGAAA
ATCATTCATGACTGCGCTCTCCCAAAGAGAAACCAGAAACTTCCAGTTCG
ACTTCCTGCGCCCGCAACACAGTCTCTACCAGTTCTTCACCCGACTCGTC
GACCAATACACCATCCTCCTCCGCTCCGAAGGCATCGACGCCGCCACAAC
AGAGAAGAAGCGTCTCGCCGACCTTGAGCGCAACGTTCAGAACAAATTCC
ACGTTCTCGACCGCGCCAAGCAACGCGCCGAATGGTTGAAATACCAAGAA
CAGCAGAAGCAAAAGAAGGAGGAAGAAGAGGAACAAGAGCGTATCGCATA
CGCCCAGATTGACTGGCATGATTTCGTCGTCGTCGAAACCGTCCTCTTCA
CCGAAGCAGACGACCAAGTCGACCTCCCTCCCCCAACCTCTCTCAACGAC
CTCCAATCCGCCTCCCTCGAACAAAAAGCCATGATGTCTCTCAACCCTCT
CCGCATCGAAGAAGCCATGCCCACCGAAGAGGAAACTCCCACCTACTACA
ACGCCTATCCCCAACAACAACCCGAACCCATCATCCCCGCCGGCCCCGCC
TACCCCCCTCAAGGCCTGCCCCCTCAACAACCCATCGTTCCTCCACCTAT
GTCCACCGCCGCCCAAGAAGAAGAGCAATACATCCGGGAACGCATGGAAG
CGCGCGAGCAAGCCGCCGCCGCCAAAGCCGCCGCTGTCCAACAACCCCAA
CAACAACAACAACCGATGCGCATCCGCTCCGACTACGTCCCCCGAGCCCA
AGCCCGTCGCCAAAACCCCACAGGCGCCACGGCGCTCTGCCCCAACTGCC
ACCAACAGATTCCTGTCGGCGAACTGGAACAACACATGCGCATCGAGCTG
CTCGATCCGCGCTGGAAGGAACAACGCGCCAAGGCCGAATCCCGCAGCGC
AACCACCAACCTGTTTACTGTGGACGTGGTCAACAACCTCAAGCGTCTGG
CCAGTCAACGAAGCGACGTGTTCGATTCCGCTGCCATGCCTGGGTCTGGG
GCTGTAGATCCCGAGGAAGAGGCCCGGCGCAAGAAGATGGCTGTCGAAGG
AGCCGTGCCTGGTTCGGGGCCTGTGCCGCCGCCGGTAGTCGGACCTGCCG
GCGCGCCTCCTAATCCTCAGAGTATGAATATTGAAGAGCAGATTAGGCGC
ATTCATGAACGGCAGGCTATGACGAGGAAATAGCTATCGTCGAGAAAACG
GCTGGCTATGTCGCTCGAAACGGTGTCGTCTTCGAAGATGGCATCTGCAA
GTAACGGAGGTACTCCGCTGCCGGAAGAGGTGAGCAAGCCTCCTGAGGGC
GTGGTCTTGCCACCCAAGGATATTCGAGATCGCGTTCGTGAAAAGGAACG
GAACAACCCCAAATTCTCCTTCCTCAACCCCGGTGACGCCTACGCTCCCT
TCTACCAATGGCGTCTCGTCGAGATCAAGGAAGGACGAGGAACCGCAGTG
GCAGCAGGCCGACCAGGAGAAGCGACCCCCGCAGCTGAACCAGAGAAGCC
CAAGGGCCCCGAAGAACCCCCGGAGTTTCACTTTTCTGCACGGATGCCCA
TAATCAATGCGCAAGATCTGGAAGTTGTGAAGCTTACAGCTCTCTTCGTC
GCCAAGCGTGGAAAATCATTCATGACTGCGCTCTCCCAAAGAGAAACCAG
AAACTTCCAGTTCGACTTCCTGCGCCCGCAACACAGTCTCTACCAGTTCT
TCACCCGACTCGTCGACCAATACACCATCCTCCTCCGCTCCGAAGGCATC
GACGCCGCCACAACAGAGAAGAAGCGTCTCGCCGACCTTGAGCGCAACGT
TCAGAACAAATTCCACGTTCTCGACCGCGCCAAGCAACGCGCCGAATGGT
TGAAATACCAAGAACAGCAGAAGCAAAAGAAGGAGGAAGAAGAGGAACAA
GAGCGTATCGCATACGCCCAGATTGACTGGCATGATTTCGTCGTCGTCGA
AACCGTCCTCTTCACCGAAGCAGACGACCAAGTCGACCTCCCTCCCCCAA
CCTCTCTCAACGACCTCCAATCCGCCTCCCTCGAACAAAAAGCCATGATG
TCTCTCAACCCTCTCCGCATCGAAGAAGCCATGCCCACCGAAGAGGAAAC
TCCCACCTACTACAACGCCTATCCCCAACAACAACCCGAACCCATCATCC
CCGCCGGCCCCGCCTACCCCCCTCAAGGCCTGCCCCCTCAACAACCCATC
GTTCCTCCACCTATGTCCACCGCCGCCCAAGAAGAAGAGCAATACATCCG
GGAACGCATGGAAGCGCGCGAGCAAGCCGCCGCCGCCAAAGCCGCCGCTG
TCCAACAACCCCAACAACAACAACAACCGATGCGCATCCGCTCCGACTAC
GTCCCCCGAGCCCAAGCCCGTCGCCAAAACCCCACAGGCGCCACGGCGCT
CTGCCCCAACTGCCACCAACAGATTCCTGTCGGCGAACTGGAACAACACA
TGCGCATCGAGCTGCTCGATCCGCGCTGGAAGGAACAACGCGCCAAGGCC
GAATCCCGCAGCGCAACCACCAACCTGTTTACTGTGGACGTGGTCAACAA
CCTCAAGCGTCTGGCCAGTCAACGAAGCGACGTGTTCGATTCCGCTGCCA
TGCCTGGGTCTGGGGCTGTAGATCCCGAGGAAGAGGCCCGGCGCAAGAAG
ATGGCTGTCGAAGGAGCCGTGCCTGGTTCGGGGCCTGTGCCGCCGCCGGT
AGTCGGACCTGCCGGCGCGCCTCCTAATCCTCAGAGTATGAATATTGAAG
AGCAGATTAGGCGCATTCATGAACGGCAGGCTATGACGAGGAAATAGCTA
TCGTCGAGAAAACGGCTGGCTATGTCGCTCGAAACGGTGTCGTCTTCGAA
GATGGCATCTGCAAGTAACGGAGGTACTCCGCTGCCGGAAGAGGTGAGCA
AGCCTCCTGAGGGCGTGGTCTTGCCACCCAAGGATATTCGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002055KJC3_002055Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002055-T1KJC3_002055-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002055-T1.cdsKJC3_002055-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002055-T1.utr3p1KJC3_002055-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002055-T1.exon3KJC3_002055-T1.exon3Aspergillus niger KJC3exon
KJC3_002055-T1.exon2KJC3_002055-T1.exon2Aspergillus niger KJC3exon
KJC3_002055-T1.exon1KJC3_002055-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002055-T1.utr5p1KJC3_002055-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264RIE
DBxrefInterPro:IPR035967
DBxrefInterPro:IPR022030
DBxrefInterPro:IPR000061
DBxrefPFAM:PF01805
DBxrefPFAM:PF12230
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1546999..1549036 -
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